xlavir

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1.0.2 xlavir-1.0.2-py3-none-any.whl

Wheel Details

Project: xlavir
Version: 1.0.2
Filename: xlavir-1.0.2-py3-none-any.whl
Download: [link]
Size: 34896
MD5: 396ce71e32a399b878973662bd489659
SHA256: dfc00abb89b21e4b5510c001390b3e59c50adf7cefefbc61ebd9bdfd68578b55
Uploaded: 2023-12-06 18:16:55 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: xlavir
Version: 1.0.2
Summary: Excel report from viral sequencing analysis output
Author-Email: Peter Kruczkiewicz <peter.kruczkiewicz[at]gmail.com>
Project-Url: Homepage, https://github.com/CFIA-NCFAD/xlavir
Project-Url: Repository, https://github.com/CFIA-NCFAD/xlavir.git
Project-Url: Bug Tracker, https://github.com/CFIA-NCFAD/xlavir/issues
License: MIT License Copyright (c) 2021, Peter Kruczkiewicz Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Keywords: bioinformatics,excel report,nextflow,virus sequencing
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Unix Shell
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Utilities
Requires-Python: >=3.8
Requires-Dist: beautifulsoup4
Requires-Dist: biopython
Requires-Dist: imageio
Requires-Dist: numpy (>=1.20.0)
Requires-Dist: odfpy
Requires-Dist: openpyxl
Requires-Dist: pandas
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Requires-Dist: pytest-runner; extra == "test"
Requires-Dist: pytest (>=3); extra == "test"
Provides-Extra: dev
Provides-Extra: test
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 3347 characters]

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entry_points.txt

xlavir = xlavir.cli:app