xirescore

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1.0.0a10 xirescore-1.0.0a10-py2.py3-none-any.whl

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Project: xirescore
Version: 1.0.0a10
Filename: xirescore-1.0.0a10-py2.py3-none-any.whl
Download: [link]
Size: 48175
MD5: 36d73225adcd5ad155c4573cc2db5136
SHA256: e5fd282464e295e19850f47aaedb04df9a9c49dd3d5b1e7cb1ec2527e52d6fe4
Uploaded: 2024-08-16 11:50:17 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: xirescore
Version: 1.0.0a10
Summary: A corss-link mass spectrometry rescoring tool
Author: Falk Boudewijn Schimweg
Author-Email: "Falk B. Schimweg" <git[at]falk.schimweg.de>
Home-Page: https://github.com/Rappsilber-Laboratory/xiRescore
Project-Url: Homepage, https://github.com/Rappsilber-Laboratory/xiRescore
Project-Url: Issues, https://github.com/Rappsilber-Laboratory/xiRescore/issues
Project-Url: Documentation, https://xirescore.readthedocs.io/
License: GNU Affero General Public License v3 or later (AGPLv3+)
Keywords: proteomics,rescoring,crosslink,mass spectrometry
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.12
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Description-Content-Type: text/x-rst
License-File: LICENSE
[Description omitted; length: 776 characters]

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top_level.txt

xirescore

entry_points.txt

xirescore = xirescore.__main__:main