Wheelodex » Projects » whatshap

whatshap

View on PyPI — Reverse Dependencies (0)

2.3 whatshap-2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
whatshap-2.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
whatshap-2.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
whatshap-2.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
whatshap-2.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl

Wheel Details

Project: whatshap
Version: 2.3
Filename: whatshap-2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
Download: [link]
Size: 1107726
MD5: da07dc240ee3ab74382102c64ef389e9
SHA256: b85a02745a8f52db29787a82e5f3718d82e07aeac103859345c3ab725f65dad1
Uploaded: 2024-05-05 12:12:04 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: whatshap
Version: 2.3
Summary: phase genomic variants using DNA sequencing reads
Author: WhatsHap authors
Project-Url: Homepage, https://github.com/whatshap/whatshap
Project-Url: Changelog, https://whatshap.readthedocs.io/en/latest/changes.html
License: MIT
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Cython
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.7
Requires-Dist: pysam (>=0.18.0)
Requires-Dist: pyfaidx (>=0.5.5.2)
Requires-Dist: networkx
Requires-Dist: biopython (>=1.73)
Requires-Dist: scipy
Requires-Dist: xopen (>=1.2.0)
Requires-Dist: pulp (>=2)
Requires-Dist: Cython; extra == "dev"
Requires-Dist: pytest; extra == "dev"
Requires-Dist: sphinx (>=4.4); extra == "dev"
Requires-Dist: sphinx-issues; extra == "dev"
Requires-Dist: pysam-stubs; extra == "dev"
Requires-Dist: sphinx (<7); extra == "docs"
Requires-Dist: sphinx-rtd-theme; extra == "docs"
Requires-Dist: sphinx-issues; extra == "docs"
Requires-Dist: sphinx-better-subsection; extra == "docs"
Provides-Extra: dev
Provides-Extra: docs
Description-Content-Type: text/x-rst
License-File: LICENSE
[Description omitted; length: 1989 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: false
Tag: cp39-cp39-manylinux_2_17_x86_64
Tag: cp39-cp39-manylinux2014_x86_64

RECORD

Path Digest Size
whatshap-2.3.dist-info/LICENSE sha256=v3wmOxxCvM-P2hRcEY__q3w4K1vXPMy6uSUgLeDIhwI 1154
whatshap-2.3.dist-info/METADATA sha256=N-Ahnp4wgpSN_gsOP5FX5pgFHeL2GuYPUfR9Sgy5mvY 3355
whatshap-2.3.dist-info/RECORD — —
whatshap-2.3.dist-info/top_level.txt sha256=mYHfbaJySViMsYkAfR5KhniFwq9QaTYKooVWfZ4epOQ 9
whatshap-2.3.dist-info/entry_points.txt sha256=ld4bwF0eV42FSTvTT-Mtyxg79g4Se_wBETpWlqv8ak8 52
whatshap-2.3.dist-info/WHEEL sha256=rY0Y6THYM7EImsHfF-zs67o8pQciAsMw9_YuSvftjrQ 148
whatshap/align.pyi sha256=wO9-qdQU60biuVWtV5jIgF5YnR5hEqusPJBGS1GvcFk 462
whatshap/readselect.pyx sha256=lIEvb9be61LJQH7Kn-YaO9hyrXzgNrtgd1jjhovW-W8 11276
whatshap/align.pyx sha256=8GGZwrWeYADZQhnKuQP1LgAGzCZl1oFS460Bzz1Zmgs 6556
whatshap/vcf.py sha256=FaTTiLfr8R93a6zyli6WdjEWkUWm2RCqCKtU1x_nQco 53162
whatshap/core.pxd sha256=DWGoob_ej_mXqdb71pAFGmOCo0P2upbTRyvAQQ9_yZU 936
whatshap/variant.py sha256=6arO95qJ8oz9kSdy6g8vnzJP06W9pxwoIC3mZgqX0jI 151
whatshap/core.cpython-39-x86_64-linux-gnu.so sha256=9lrLWeSrJf5Zqz-SPq6iCKR-f8tczqcB4dh6wlU0-64 914784
whatshap/cpp.pxd sha256=jW4JG3hl_XdmaZWAeg5EZ6uMqmZeUmWbf4ThQP509GM 11515
whatshap/readselect.cpython-39-x86_64-linux-gnu.so sha256=p7vcEZi4gew23S2mwKgcjR0NGSFGzH8ZbVYiDpg6Rh8 292960
whatshap/priorityqueue.cpython-39-x86_64-linux-gnu.so sha256=F7OIRjaPrebPzkijlyq_uKra468Qtmqv_FozAL0yj3g 80648
whatshap/priorityqueue.pxd sha256=1oe9rx1CETrMvFqRPJesFYA3g9ADgMGefLVdLjNCgi0 901
whatshap/pedigree.py sha256=SkAgU_TnmbfBli1Du2bC1lMlfz91xDaM_qCUqgSLZWw 11576
whatshap/priorityqueue.pyx sha256=4_t4ov7gaH9-XMGoq8QHAi0NwFFGPsUu-touzqG8sHU 7100
whatshap/core.pyi sha256=FugDNCKsO5dVcmWzry7fsv6FnHCrU6TG4YViKyhD74Y 5991
whatshap/_variants.pyx sha256=NHLzr1XRSrWX4lQ3OouHquQfMRaoXgVeEfvjAZBxgy4 12514
whatshap/phred_scores.py sha256=_Vrcg0R7whFUoRxrvwhdLSxeVEnfrcfC7dt2prhf-Cs 2703
whatshap/_variants.pyi sha256=2znINJLv2aINu99b6h9bqCGkLU3n_VgfhAo6KajZ-2k 524
whatshap/variants.py sha256=yxtm5rWestEF9zpBt3xjydZt3V9TO3XfakP2_7oCm14 33241
whatshap/testhelpers.py sha256=UOZP01FqMv6kRXQ2YXSbT2kBTNTwVcmjvzFehEQpt5A 6702
whatshap/__init__.py sha256=aPVwgzRH8vYRfi4AxwgfbCSI93QB7Twl2jwvzq4NCz0 346
whatshap/priorityqueue.pyi sha256=vy0N76Q14mBgs8whbBMzDfA476aJg8XX0nFHWRLBGOA 393
whatshap/readselect.pyi sha256=8dkqs-ZJmgx_achE1v7EbUGLE4fn3ulZla065keIcT8 225
whatshap/core.pyx sha256=fVdXMYcQYv6cu003t51RAgSoN2W0fIMiwz4d4rt3ZDk 22191
whatshap/utils.py sha256=LtiaTIzXWIBTG3y2uLjqpqYCSyqtWMNAC9SgszTbGsA 3492
whatshap/__main__.py sha256=MTh-ZLnIh1BufBiCVoN2B5biPRFv0UKm9V4zIerQztU 3700
whatshap/merge.py sha256=xUCm0HQQ0hr5QodjpeIt0byTFVXsKd5SOdmFg2gOs4w 8757
whatshap/graph.py sha256=oz-OpdTZUUpWkawhivjP6X7vzwIXVl9lK0pilEqwqW4 3937
whatshap/.gitignore sha256=j2fpHMFTXB4pQCWoOjB_QSMvds7ULC9C3eMBKfc8ShQ 21
whatshap/align.cpython-39-x86_64-linux-gnu.so sha256=_dOxZ15H88iZI9LZY5ziKuMzcia4kB0laSAmtxZ6RNg 285904
whatshap/verification.py sha256=7h54V3sFmYdQAXWfoCq2nzRmr31JNjzZlMhH0a-U1sI 2020
whatshap/types.py sha256=1zGPhKwZHrDc6LYqLaVuJiPi6MoWege9Ys27xfRope0 385
whatshap/_version.py sha256=4z_-xLM3EHEkkYyV7TWMIHplbS3yfPiWN6TAzoKymbU 406
whatshap/timer.py sha256=wItZm5BEOoEkTn8MJ7LgH6QL9yuBGXH91JExqLOYxCU 1719
whatshap/args.py sha256=8bad2_xoLgv0bbe7f0Cy5A2r1RXoh2C73V0nsfa83Gg 564
whatshap/_variants.cpython-39-x86_64-linux-gnu.so sha256=qxNXQLLUyQ7oqa1qM7nwBO7qjS8QjLIboUACEoTtCdQ 171384
whatshap/coverage.py sha256=OZT3rHFdMoak3lOwHfrZpy_rvjqBdJDQtJq282Byrtw 477
whatshap/bam.py sha256=ylf27E-1ynxKk9AV5vuTLHOmMVWm31uo3cKS3XjNnp4 7268
whatshap/cli/polyphase.py sha256=HJXirhKnM1eOgTqw6X3-gzoAPG8jaCHThsrOanI8E-4 20352
whatshap/cli/split.py sha256=vNhs5VzdRkB5sJK-St87avKEcXAKb8RbfwDLlH1OLIw 17983
whatshap/cli/phase.py sha256=iWAXiUMBqDkfJv0fWAgnHMX6AeGERXza2O6wSbqmJi4 52281
whatshap/cli/polyphasegenetic.py sha256=P8v9SiKGWKt6zJxzHcG-seDNf0TKHXMK3mgjYP-QOio 24145
whatshap/cli/hapcut2vcf.py sha256=MDkqhZZw-uob5Z6kLrht29n1WUASCejZqs-A5bDPy1U 7912
whatshap/cli/genotype.py sha256=bUGsDrTMRs4-E4SXKY1M-BpAr93hB8p67sE6aj002ic 24029
whatshap/cli/compare.py sha256=d0crfGjPGx152pJRFvSz1ND-0OPGID3f4yw5Tlp7V4Q 40498
whatshap/cli/learn.py sha256=3BmMOG7FZoOtJo966JIeGhMSpfje5lMI0BnoEglOCKE 2175
whatshap/cli/haplotagphase.py sha256=KQRg-LwGCLuH0bT5S6dcWD2l-VcQCtNxsDtZEwul4ws 15050
whatshap/cli/__init__.py sha256=Ywvt4Ubnl4Xx485aWFzn6b85u3g4BmkCWHy3kbHAYDc 7482
whatshap/cli/haplotag.py sha256=0YvI11_1x_3kpTRj8uuyVtp4kdbnBHWaxUZEgi1zl2I 27058
whatshap/cli/unphase.py sha256=fUPVf2CDe637JYdAMH5HJ5mcJ9e7M9JkisxGZtwRBGw 1947
whatshap/cli/stats.py sha256=Z8SPp4xsfz3GvRwIQsthReD5T9wTCabSMKXgVYjgi00 21930
whatshap/cli/find_snv_candidates.py sha256=xL4hWIVXQwj2qYrsW2yv19W5KO-VTeoToJNB_HkrryI 5599
whatshap/polyphase/solver.cpython-39-x86_64-linux-gnu.so sha256=lmsVsblGO2Ss1zKfwKwaLn85P1sLzOBRGxalk1Pl_xk 507408
whatshap/polyphase/solver.pyi sha256=z-ka5OIw_IpHI5rButTlisGDnSj_Lqraqt4opTalNQE 1999
whatshap/polyphase/threading.py sha256=7gCvIVFIY7g0GK7hnjHuUDCP-AqKW3NJ2AB_MsC1GFo 11095
whatshap/polyphase/clusterarrangement.py sha256=AglmXE_KUMOYtNnIaBAmg8FhuwRGJ8mUbcA0TnR1lsc 2557
whatshap/polyphase/solver.pyx sha256=hq-YjqqOptG4DUH0y6KZSKNlDYNPZP9xntGhH0L-8nw 9830
whatshap/polyphase/algorithm.py sha256=GP8-oJhj6f8iMdY7KELhwnd9NS87JUP50bj4tdUrEsQ 13096
whatshap/polyphase/reorder.py sha256=4tHIrHMRITYQuYSnf2ttSMmYU0P-OZ6kJmlieZbzCzM 21006
whatshap/polyphase/solver.cpp sha256=M9Y6_cge00zmvR8rM6eapSA5vVHH_AOt1taPnqx83dg 731425
whatshap/polyphase/__init__.py sha256=FfAp5W76gI0GNAPJqcjelr2UA9J8kE0O8wqLnMAQydA 7461
whatshap/polyphase/plots.py sha256=C2lqsK6CR3MoEW3afVWAUWbzAdCaxp7AMna8aKtwDt0 39161
whatshap/polyphase/variantselection.py sha256=HDcHpuwA_2q0EJWw75gEFf51Kjfi0YVIHtqfWkedbSg 7081
whatshap/polyphase/solver.pxd sha256=sy52p7YwJ0oebxLsJFdRbdwR-DXbqv1aG3vbEB9oZN4 638
whatshap/polyphase/offspringscoring.py sha256=OCsKaT9G47Kzn2UkzmtCOjt55zZgzFRZx2FjaG83Bq4 10145

top_level.txt

whatshap

entry_points.txt

[console_scripts]
whatshap = whatshap.__main__:main