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vollseg

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32.3.2 vollseg-32.3.2-py3-none-any.whl

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Project: vollseg
Version: 32.3.2
Filename: vollseg-32.3.2-py3-none-any.whl
Download: [link]
Size: 88865
MD5: d82c515fffe5374048d862530b5f09a7
SHA256: 3b291b48d78bdbefad567807f710fb2354de172cc644cc439c5981a6f2034174
Uploaded: 2024-11-06 14:07:10 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: vollseg
Version: 32.3.2
Summary: Segmentation tool for biological cells of irregular size and shape in 3D and 2D.
Author: Varun Kapoor,Claudia Carabana Garcia,Mari Tolonen,Jakub Sedzinski
Author-Email: randomaccessiblekapoor[at]gmail.com
Home-Page: https://github.com/Kapoorlabs-CAPED/vollseg
Project-Url: Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg/issues
Project-Url: Documentation, https://github.com/Kapoorlabs-CAPED/vollseg#README.md
Project-Url: Source Code, https://github.com/Kapoorlabs-CAPED/vollseg
Project-Url: User Support, https://github.com/Kapoorlabs-CAPED/vollseg/issues
License: BSD-3-Clause
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Topic :: Scientific/Engineering :: Image Processing
Requires-Python: >=3.8
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: tifffile
Requires-Dist: matplotlib
Requires-Dist: napari
Requires-Dist: cellpose
Requires-Dist: torch
Requires-Dist: test-tube
Requires-Dist: lightning
Requires-Dist: pynvml
Requires-Dist: poetry
Requires-Dist: stardist
Requires-Dist: tox; extra == "testing"
Requires-Dist: pytest; extra == "testing"
Requires-Dist: pytest-cov; extra == "testing"
Provides-Extra: testing
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 3410 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.3.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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vollseg/CellPose.py sha256=e2DS20uUPIW-lXhaalXH7N7KtszYi-A2W7ZnyjYkBG8 9305
vollseg/MASKUNET.py sha256=Mvlvj1CdLuS8x0bzDJq-w28HXxMihMobK4RTfwGS2fo 2419
vollseg/OptimizeThreshold.py sha256=hGVlJSMLOROcLL7uNPg-5bhkZU5_UcTzXPNhk3sKlO4 7815
vollseg/PredictTiledLoader.py sha256=2H_75XfDpm4fNAPJ5-t-Yvt3D9ps-6Onx33RJTTVdAs 907
vollseg/Projection3D.py sha256=FI7AHHiOxg1aQSHySdk_bPSZeIbMFmALVxfWsMvVWKk 7038
vollseg/ProjectionUpsampling3D.py sha256=T1pkehVUnjegulsT8u_rPPX1SlcfXHQ6zuPvOOiy8rc 4387
vollseg/SimplePatches.py sha256=7MJB0N8r_pngcKk4tCW-rZtKA36nn9I_9_yEoaiujUE 7116
vollseg/SmartNucleiPatches.py sha256=lWDZeXCr05x72Ul0-IK0XUZPZqKhKroFKAT6lRQqKUg 23565
vollseg/SmartPatches.py sha256=DHkkdP0phDjGDSKg1LayIvjKE9yK03RN5Us1mv4NYn0 28648
vollseg/SmartSeeds2D.py sha256=WapdvjeZFEHlm-WPsA-bGKhWaDt3XTH3wehj0liwkJ4 23523
vollseg/SmartSeeds3D.py sha256=kf-nh6-klVA5aslCJomkD3Snqo3IDpBb_1ahc9zc3iw 24340
vollseg/StarDist2D.py sha256=vf9incGqaY_6T_k-PbKNA8CouT89veNPwEWgh_TYTCE 5040
vollseg/StarDist3D.py sha256=YfUx1fZHGXpKDOuxLITJdfVg4GyQjBGJiyIkizhk_-I 4873
vollseg/Tiles.py sha256=b3LWLVAyQz8O8Iv26NTvaFFCqJijZjo-iGIQ3Orjl-Y 15091
vollseg/Tiles_3D.py sha256=v_tqOgT8SzLu4-a-5i2ipq7ERD2ow6UGpBZv7wqXcj0 3985
vollseg/TrainTiledLoader.py sha256=X1_EepEA_p15H8qBpdAqCZoSOGXeKcpYKTufffihbIQ 7186
vollseg/UNET.py sha256=s7Ygzzc0iIPLZuLMtwsaMtThuCXbDUPtNfFCr7FYVzI 2411
vollseg/__init__.py sha256=SS5BDLaSKGxKUBP9fRzpcYK9U6cD0UYzFCKcIQZ68vo 7456
vollseg/_version.py sha256=f0hu1R1CxARAzEaLKchnKheQ6syapFP2jaHa1dYUQW8 80
vollseg/get_data.py sha256=KD2JJA09DPTMjpORSrZThPTiVOnErq9OOaTRIQgcQZs 528
vollseg/inference.py sha256=Ss02szho3t6dSqgGYw4HvuHFV8HXiwcIyaR2niB5JRk 15009
vollseg/inrimage.py sha256=dg-BWse_jCfC7mLQjSfw3oVN5uS5FMMz6lCwUEZvoG8 7628
vollseg/matching.py sha256=rgoPAI-ygjFoq9qhWws5W4f5t_W_BAIHLDIj8_r0nAk 16366
vollseg/nmslabel.py sha256=5UrYHCjWprzIoL36UigKqGLJTYQ1x5ZpgCvke3fZnOs 5819
vollseg/pretrained.py sha256=NTuKubbg6M9xcw_Zbc7KGZ15HCbWFCdINIXK_lwkjJQ 4450
vollseg/seedpool.py sha256=86xxkvTy7ExPtKB6QkEmvYR6DY4BTBtqcXitBBagTYI 640
vollseg/spatial_image.py sha256=xnBzD-pfd9hhTjRfWxWTGPyyZIXvPyabX4nw359uDGc 7172
vollseg/unetstarmask.py sha256=VMWP6IaRMZ28AMF1dLE0Z33nvEgBB5S1_3f-xqtn_iY 988
vollseg/utils.py sha256=dGuiQqi7p6iwfC8rcGGS4KQp2_EF7RDGZXfLXOuO5-A 151533
vollseg/_tests/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
vollseg-32.3.2.dist-info/LICENSE sha256=-NP4_xexyjzG005kBs6Q6b-X12HIVCtKP4qHfEEcZfk 1512
vollseg-32.3.2.dist-info/METADATA sha256=ENEMbiEbD4JtlJWjuLDbFEQRgJ4NcKpxGu3BoihJihg 5133
vollseg-32.3.2.dist-info/WHEEL sha256=P9jw-gEje8ByB7_hXoICnHtVCrEwMQh-630tKvQWehc 91
vollseg-32.3.2.dist-info/entry_points.txt sha256=lXCUPEWkD9DR7OUCTm_ScbPcCEuQYumDiLGAADwNHZk 46
vollseg-32.3.2.dist-info/top_level.txt sha256=tCHlPBSzAO5j1mfjFhK3xyKf-ksqlFT8A5jCcmPk_xo 8
vollseg-32.3.2.dist-info/RECORD — —

top_level.txt

vollseg

entry_points.txt

[caped.manifest]
vollseg = vollseg:caped.yaml