Wheelodex » Projects » vimms

vimms

View on PyPI — Reverse Dependencies (0)

2.1.4 vimms-2.1.4-py3-none-any.whl

Wheel Details

Project: vimms
Version: 2.1.4
Filename: vimms-2.1.4-py3-none-any.whl
Download: [link]
Size: 247311
MD5: 8bbe22624d00db4d63b117313e4a07c8
SHA256: 305c17a6d34a5b4dd6b7aca49e02b4099cd237a3e2f94eaab87473433bab1748
Uploaded: 2023-10-02 23:11:23 +0000

dist-info

METADATA · WHEEL · RECORD

METADATA

Metadata-Version: 2.1
Name: vimms
Version: 2.1.4
Summary: A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics.
Author: Joe Wandy
Author-Email: joe.wandy[at]glasgow.ac.uk
Home-Page: https://github.com/glasgowcompbio/vimms
License: MIT
Keywords: LC-MS,metabolomics,simulator,mass spectrometry
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.9,<3.11
Requires-Dist: events (<0.6,>=0.5)
Requires-Dist: intervaltree (<4.0.0,>=3.1.0)
Requires-Dist: ipyparallel (<9.0.0,>=8.4.1)
Requires-Dist: joblib (<2.0.0,>=1.2.0)
Requires-Dist: jsonpickle (<3.0.0,>=2.2.0)
Requires-Dist: loguru (<0.6.0,>=0.5.3)
Requires-Dist: mass-spec-utils (<0.0.13,>=0.0.12)
Requires-Dist: matplotlib (<4.0.0,>=3.7.2)
Requires-Dist: ms-deisotope (<0.0.54,>=0.0.53)
Requires-Dist: networkx (<4.0,>=3.1)
Requires-Dist: numba (<0.58.0,>=0.57.1)
Requires-Dist: numba-stats (<2.0.0,>=1.3.0)
Requires-Dist: numpy (<2.0.0,>=1.24.3)
Requires-Dist: optuna (<4.0.0,>=3.3.0)
Requires-Dist: pandas (<3.0.0,>=2.0.3)
Requires-Dist: plotly (<6.0.0,>=5.9.0)
Requires-Dist: psims (<2.0.0,>=1.2.7)
Requires-Dist: pymzml (<3.0.0,>=2.4.7)
Requires-Dist: pysmiles (<2.0.0,>=1.1.2)
Requires-Dist: requests (<3.0.0,>=2.31.0)
Requires-Dist: scikit-learn (<2.0.0,>=1.3.0)
Requires-Dist: scipy (<2.0.0,>=1.11.1)
Requires-Dist: seaborn (<0.13.0,>=0.12.2)
Requires-Dist: statsmodels (<0.15.0,>=0.14.0)
Requires-Dist: tabulate (<0.9.0,>=0.8.10)
Requires-Dist: tqdm (<5.0.0,>=4.65.0)
Description-Content-Type: text/markdown
[Description omitted; length: 2895 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.7.0
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
vimms/Agent.py sha256=dZgK8MZuEnIPdIdaUtS2lJUjlNKp0CQ29WdKZvK3xvA 6895
vimms/BOMAS.py sha256=t6pwtJY1aJkK-kinOHYJJTi2dpln1kGQaPzEPCk070I 40460
vimms/Box.py sha256=_rg_4LvxCRmQn_6erAOnFEqRD1TUemijSBhL_Chw34o 36574
vimms/BoxManager.py sha256=Tf-KTnWIAao_1h8ml0NTTRsHDXywuwxWmDdmU1NxLYk 9219
vimms/BoxVisualise.py sha256=tW2Omc9gWL-pTGoFbKIUSnBbGjVIROkcFkumPC__6eg 47683
vimms/ChemicalSamplers.py sha256=rRPhgLVml4Mw8abF3VhA_8irVZaCRXoE2F093H40stc 35998
vimms/Chemicals.py sha256=KP7x_z3fxWGXU9090xLJuiy5G-fmsNo9_BE6Scxn5yM 32543
vimms/ChineseRestaurantProcess.py sha256=LNmIz_8ytw7JCKKU6hTgcQ56Jc_gCVhFZq50vWCq9Y4 1078
vimms/Chromatograms.py sha256=6Q-WxcIWTuQk7X83E5l07cq9KGJbXdbLHAgl2kams6k 6269
vimms/Column.py sha256=Z0wfv3S0JLDp0NMMBRC9EKTZZS18UH_sKaA02-SFSAA 7467
vimms/Common.py sha256=K99bDcZ23K1mCSPpt_lnk-Epw7TDqq1GqHt9VFrFIIs 26501
vimms/Controller/__init__.py sha256=C-bySXvUE8lQm1Cr1dRfKHSpyWLsM1kX5n7RZZ9VESc 381
vimms/Controller/abc.py sha256=wHONGfFAGevOuK1_ne9iVjIgL7VA5RTdG_17EZWUO3Y 1315
vimms/Controller/base.py sha256=EUxa9vUaTI8WV4W8tCWD5Sam94YCGQQ_yrgUJ5P9VP4 16769
vimms/Controller/box.py sha256=PQratBslntn9fukWV9lpZHi38h6z_NUClKww47zcdL4 18725
vimms/Controller/dia.py sha256=JsEZfGh18J-qDTX4YvVdYt5lxiJa8zCaOYZIH6A_3eM 11117
vimms/Controller/fullscan.py sha256=uPM-RtTRScXvOuBwRlOLgKLQjKKd5-_RQbITzA8aNKc 1954
vimms/Controller/misc.py sha256=w5e1huWuzlBAD1c1Aj9QFbSr1L16cNvLH3N7LbWV-vk 21176
vimms/Controller/model.py sha256=GuLqn4Yy2WFZ8vvyAJKkMNDHfg0Mn35BMkk-QsvNGMs 3697
vimms/Controller/noise.py sha256=q0pCsc6VAszw0jQrSVLDVu6OpP7siX8y9YEQfY6oF30 2424
vimms/Controller/roi.py sha256=QyClyxDUzJ9u42LZ5jAXNuXC-KCeDauTiDPjzefjmyU 18851
vimms/Controller/targeted.py sha256=mKQWoienEJKb0CDjNlv1OMiiQiQutfoUlxVH1ioXF-o 11296
vimms/Controller/topN.py sha256=Z-vfMH2QCOCr6bfIIodrK663Qj8S5WZqJus9ogpFXUY 14085
vimms/DDA_vs_DIA.py sha256=8OOWGP_ujeFe7KPapz3hZ0AlwqSc5LJfBhsDKPlk_4A 21642
vimms/DIA.py sha256=dw8ygim3EOLK8vshHUMq-9NnYKX8zQz7r86mpG94K1M 6771
vimms/Drift.py sha256=7TVyR_uqBL9dvWPxT0cvdM5idJuR9O-xHHyV42k9DHs 29639
vimms/DriftCorrection.py sha256=8blc_jQoVF3iVxO7YLxl-nMDqg5rE6OCoGCAo3hsnJQ 7806
vimms/DsDA.py sha256=iwmKlsSyVMUv0ma4WhEwbWQGD1UotlafEDqpurrugGU 11416
vimms/Environment.py sha256=CbmiNmFWLeBTuu_dcODYspLpYU0zCFbkb25DD-IlE_g 10935
vimms/Evaluation.py sha256=BOc4IF6VUmTH5uV0iYr8MDLUKQKae-P6oIyPbiEWD-g 34552
vimms/Exclusion.py sha256=lgtJJMrjm8ubFBwuHBnK_34S40WHzh1IN4fFu4eTiek 17985
vimms/Experiment.py sha256=rIcC0dmdS_NOkEiIVcoYDV8MQpxWVTtLM4sC_LjI8e4 25298
vimms/FeatureExtraction.py sha256=JS_gKPCigyKy3YbIR9nGXAiwXoasg5suTp5ZZM2IOSM 4287
vimms/InSilicoSimulation.py sha256=mCld0x0LVsA5Sxo49gtlS77ZHzLLsKo_NmDLEBBKzyA 16054
vimms/MassSpec.py sha256=gRQMTAjbGFAquLKpmkZcACOnyeX0iD_qvcBfQRkKWNk 35966
vimms/MassSpecUtils.py sha256=k3AtLPtqKB-ED6L-R_0Bsn3p7bg1W6ySSgqKzAR5x7A 14374
vimms/Matching.py sha256=Bi5LWJqviAgaZx8v6A7rC1Y4hSeJiabc9pREZaVfb7k 26651
vimms/MzmlWriter.py sha256=ZADaGz5V1wFQmzKTthWgcfCnBzZ5rY7qAKXx-1Ge4ps 8383
vimms/Noise.py sha256=64HLJdIl0nCqhPML0J8vt5_fCXw3lsvzzBNz0BOXprs 3808
vimms/PeakPicking.py sha256=x7rSc2E81rWIOdprpN1RXo_3jrJA9tUrZxcer85JPuw 7213
vimms/Roi.py sha256=UcF309Y-i7VUhxRk81M7k3jcXGwE2Hs4nA3cna41dkQ 46870
vimms/Utils.py sha256=C8knFaVp69CZK2FE3WwLQi0PSXpuRdLK4eaAieziIWQ 6130
vimms/__init__.py sha256=VHeuAD9EJqPSws54hfJ92wB8YLXxXtfd9ZwNyxjd7L4 15
vimms/scripts/DDA_vs_DIA.py sha256=n0MTOEyKiH_fOEq6d-VOHsXB5kKhTLABD2ptajPDnyM 63828
vimms/scripts/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
vimms/scripts/box_controller.py sha256=sQEu7h3mEKg45MTU8k9IBuH3aI_hYkgeG8wg4MIzp18 11315
vimms/scripts/check_file_sizes.py sha256=Jt8yO99OEjmZlHtEOC3YTqcfF2izeCeMugRmrzhXgwM 4445
vimms/scripts/check_fragmented_ions.py sha256=L-I-x0WnFLQkoUDd5ybkIzolrzM7iHn2_ab8MjbjrV0 20650
vimms/scripts/check_ms2_matches.py sha256=2W_kSn1OLWirV_g9OM-dHsokhDZlN3PmBH4vrVG5cVg 10619
vimms/scripts/check_score_threshold_1E4_hela.py sha256=ZdbUqfzNU5XeCXTOCUSZLJcoinAWdaFyFTffwStnosQ 4699
vimms/scripts/config/SmartROI_config.txt sha256=zSLHTWf-y1PJoq8eTJiiQURyD5MwL5GtYqANsOylrfw 846
vimms/scripts/config/TopN_config.txt sha256=9GpZbOx53xl4aMlKIATKQEgiVB_UL3vursefScA9Lf0 693
vimms/scripts/config/WeightedDEW_config.txt sha256=J1fPFfHzr5E5YfIrlx5uV88UbidgwlB-E7aqGy-4syU 769
vimms/scripts/config/replicates/SmartROI_config.txt sha256=av84kljdxEpAWcGLG5u_av-hqVT5ciZj_ViAehsDqaA 824
vimms/scripts/config/replicates/TopN_config.txt sha256=ME6eAEFIwXjOTevoPu1RKyIE9xKmdoENsrRCpuZU-SE 671
vimms/scripts/config/replicates/WeightedDEW_config.txt sha256=HJ0MwQq-L2fPkMl_KsDP3mv54YgkMG9V1RlnuO7scYo 747
vimms/scripts/data_generation.py sha256=dMXMneJkzqHSTFiYqnjhLr9sMWyr8M_qjnfCFG8kis0 4520
vimms/scripts/debug_chems.py sha256=pYEhyDbfB8p8hGq2OAQwQESqqZ3_zBtUMU_yYekaeVg 2980
vimms/scripts/dsda_script.R sha256=GA2kJNayOMzfEUp_WYhvaWKikldTo83Qpq6mnsUg7o0 17248
vimms/scripts/generate_test_fixtures.py sha256=qEwrhxMxln2ctCIcJf9ZduE9qWMNAMvMRQpqioJRhrI 1718
vimms/scripts/in_silico_optimise.py sha256=XyL_lY4G7Y0mhBoz7FNCCbKZ9qWM0rcRq9uVM88_GrI 12418
vimms/scripts/ms2_database_matching.py sha256=u9g5Wu1y4ruGs22LBT79TvfhbRSZPSUXCgUNTMaPrKo 5750
vimms/scripts/msdial_wrapper.py sha256=HdVoqR5Lr4olnifKlLLBkuM9gKJX6stBgZzLT_ktB_I 7641
vimms/scripts/multi_sample_experiment.py sha256=dTgda1xhM8wXytsGznFAfd5jsm7CgxiIGG_FhitXwoQ 16096
vimms/scripts/mzml_summarise.py sha256=fwhp9F2HuAu3wfUsnQIy9MipOoCSkA7no8-Gu22l3Hk 2130
vimms/scripts/openms_batch_feature_finder.sh sha256=BlccASjbOc5YaFj8KHIrLJYCgFt4mQmnxVvoYO2DzLo 1474
vimms/scripts/openms_evaluate.py sha256=AQeVZZfmEaVTQ6UDafjgSZ0HIWl6U5ZsJNX5gKYi-og 3635
vimms/scripts/openms_feature_finder.sh sha256=P-JBmKiixG5bfrhICB0Vb0G55XwyKoym2uReP6DWqD0 1855
vimms/scripts/openms_optimise.py sha256=lpUCzM7frzVUCOJZ9vCxHbcIcVeqKZhrjZZQUk7GPO0 24953
vimms/scripts/openms_optimise_params.py sha256=nVnEx_amwBHXog34yPnt-qprxXG7Vjroelqc93TBXx8 1456
vimms/scripts/optimal_performance.py sha256=Uys5bfntOFCMh6hfNTEFpHXr-cm8ylRRvlw2606NE5U 11957
vimms/scripts/parse_txt.py sha256=bWg1YbfrRSWPGXAYy3icUCMYNv33w7uz0n9UkkqBpY8 5467
vimms/scripts/peakonly/make_training_data.py sha256=rMI_tCZfbEiaLE7eiU_jNRUAREMqc_usV2OfFt6R_XY 5324
vimms/scripts/profile_beer_chems.py sha256=eA5aBMqIh8ObAPvpS0Rv3WgHWqaTIfhI36UfQZB_ceY 2793
vimms/scripts/profile_synthetic_chems.py sha256=lBeuhidWbKgjC6yo1yd4EjqiPenQnVosJ71oCKyfSVU 3056
vimms/scripts/remove_lines.py sha256=ew6UZXCvEu8QVuNY9PjBm-U2M0-zC_nhFsfFs3MHyIM 515
vimms/scripts/scan_timings.py sha256=J9sDpXGgcCSBGyP1nQ7eRGlVOu0nxMEkvAueU8YdbCg 9431
vimms/scripts/topN_test.py sha256=hizVWMVvYySuza7dZOAvVbRmOau36LrPVTs1duEEl2I 10483
vimms/scripts/topN_test_bsa.sh sha256=WqhwwxTz5RbCVnj2XU8oVwsr7P6oC7XpRv96NSZIebI 2290
vimms/scripts/topN_test_hela.sh sha256=dy7CwV_K8AEdSKiHxilukUEK4u16e5sTPzPNPGQ5XMk 2292
vimms/scripts/xcms_script.R sha256=ZpQGEmgRPwPK_jSEBRzYVDjpVhgB22MfvQsg98n_rW4 4820
vimms-2.1.4.dist-info/LICENSE sha256=EoIlP5jsH43Xe7fwP9brJq8RvkJl5mOYz33J1rQ29Bs 1069
vimms-2.1.4.dist-info/METADATA sha256=lp7sqygB67npnEDTmKPjVFTC201w7V4OB40Rr5yei24 4611
vimms-2.1.4.dist-info/WHEEL sha256=d2fvjOD7sXsVzChCqf0Ty0JbHKBaLYwDbGQDwQTnJ50 88
vimms-2.1.4.dist-info/RECORD — —