Reverse Dependencies of upsetplot
The following projects have a declared dependency on upsetplot:
- adagenes — Generic toolkit for processing DNA polymorphism data
- bartide — A Python package to extract, correct and analyze nucleotide barcodes from sequenced reads.
- biobookshelf — a collection of python scripts and functions for exploratory analysis of bioinformatic data in Python
- biomapper — A unified Python toolkit for biological data harmonization and ontology mapping
- card-live-dashboard — A dashboard to display antimicrobial resistance data from CARD:Live
- cazomevolve — A bioinforamtic package for investigating the evolution of CAZomes
- cnmfsns — cNMF Solution Network Space
- conformist — Conformal prediction for machine learning classifiers
- descartes-rpa — descartes_rpa: Extract pathway features from Single-Cell
- domaps — Python library for dynamic organellar maps
- drugstone — The python package for the https://drugst.one/ platform.
- EmitGCL — MarsGT: A Python library for rare cell identification (Internal testing only)
- ERgene — A python module that could analysis the ERGs
- fhir-aggregator — no summary
- genefeast — Gene-centric functional enrichment analysis summarisation tool
- gramep — GRAMEP - Genome vaRiation Analysis from the Maximum Entropy Principle
- GSForge — Feature (gene) selection package for gene expression data.
- ingenannot — InGenAnnot: Inspection of Gene Annotation
- IsoMarker — IsoMarker
- MarsGT — MarsGT: A Python library for rare cell identification (Internal testing only)
- massdash — massdash
- MetaXTools — MetaXTools is a novel tool for linking peptide sequences with taxonomic and functional information in Metaproteomics.
- missing-mga — A package for handling missing values in datasets.
- mosaicmpi — mosaicMPI: Mosaic Multi-resolution Program Integration
- netclop — Network clustering operations (for geophysical fluid transport)
- nullsweep — A comprehensive Python package for managing and analyzing missing data in pandas DataFrames, starting with detection and expanding to complete handling.
- omicscope — OmicScope: from quantitative proteomics to systems biology.
- pacu-snp — Workflow for whole genome sequencing based phylogeny of Illumina and ONT data.
- pankmer — Generate a PanGenome given a set of genomes
- PhenoFeatureFinder — Find metabolic features linked to insect development phenotypes
- protein-inference — Protein Inference Library for Network based Inference
- proteomics-downstream-analysis — A package for downstream data analysis of proteomics data
- querynator — Python package to query cancer variant databases
- rdrpcatch — no summary
- revolutionhtl — REvolutionH-tl: Reconstruction of Evolutionary Histories tool
- RNAlysis — RNAlysis is an analysis software for RNA sequencing data. RNAlysis can help to filter, visualize, explore, analyze, and share your data.
- secimtools — 'Metabolomics tools from the SECIM project',
- sequana — A set of standalone application and pipelines dedicated to NGS analysis
- sniffles2-plot — a visualizer tool for plot generating
- sourmash-plugin-betterplot — sourmash plugin for improved plotting/viz and cluster examination.
- spapros — Probe set selection for targeted spatial transcriptomics.
- superexacttestpy — Python implementation of the SuperExactTest algorithm
- trand — 'Transcript Distances'
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