toil-msk

View on PyPIReverse Dependencies (0)

3.21.1 toil_msk-3.21.1-py2-none-any.whl

Wheel Details

Project: toil-msk
Version: 3.21.1
Filename: toil_msk-3.21.1-py2-none-any.whl
Download: [link]
Size: 467184
MD5: 56fe72c34ae6714752fc6c860365e224
SHA256: f0320eb6cd157354f9b8b207e4e4bd0a9c6e4da4b53a92d8e08ba356f7bcd69d
Uploaded: 2020-06-19 15:51:47 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: toil-msk
Version: 3.21.1
Summary: Pipeline management software for clusters.
Author: Benedict Paten
Author-Email: benedict[at]soe.usc.edu
Home-Page: https://github.com/BD2KGenomics/toil
License: Apache License v2.0
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Healthcare Industry
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: POSIX
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Astronomy
Classifier: Topic :: Scientific/Engineering :: Atmospheric Science
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
Classifier: Topic :: System :: Distributed Computing
Classifier: Topic :: Utilities
Requires-Dist: dill (==0.2.7.1)
Requires-Dist: six (>=1.10.0)
Requires-Dist: future
Requires-Dist: requests (<3,>=2)
Requires-Dist: docker (==2.5.1)
Requires-Dist: python-dateutil
Requires-Dist: psutil (<6,>=3.0.1)
Requires-Dist: subprocess32 (<=3.5.2)
Requires-Dist: addict (<=2.2.0)
Requires-Dist: sphinx (==1.7.5)
Requires-Dist: pathlib2 (==2.3.2)
Requires-Dist: boto (==2.48.0); extra == "all"
Requires-Dist: boto3 (<2.0,>=1.7.50); extra == "all"
Requires-Dist: futures (==3.1.1); extra == "all"
Requires-Dist: pycryptodome (==3.5.1); extra == "all"
Requires-Dist: azure-cosmosdb-table (==0.37.1); extra == "all"
Requires-Dist: secretstorage (<3); extra == "all"
Requires-Dist: ansible[azure] (==2.5.0a1); extra == "all"
Requires-Dist: azure-storage (==0.35.1); extra == "all"
Requires-Dist: cwltool (==1.0.20190906054215); extra == "all"
Requires-Dist: schema-salad (<5,>=4.5.20190815125611); extra == "all"
Requires-Dist: galaxy-lib (==18.9.2); extra == "all"
Requires-Dist: pynacl (==1.1.2); extra == "all"
Requires-Dist: gcs-oauth2-boto-plugin (==1.14); extra == "all"
Requires-Dist: apache-libcloud (==2.2.1); extra == "all"
Requires-Dist: google-cloud-storage (==1.6.0); extra == "all"
Requires-Dist: kubernetes (<11,>=10); extra == "all"
Requires-Dist: pymesos (==0.3.7); extra == "all"
Requires-Dist: psutil (<6,>=3.0.1); extra == "all"
Requires-Dist: boto (==2.48.0); extra == "aws"
Requires-Dist: boto3 (<2.0,>=1.7.50); extra == "aws"
Requires-Dist: futures (==3.1.1); extra == "aws"
Requires-Dist: pycryptodome (==3.5.1); extra == "aws"
Requires-Dist: azure-cosmosdb-table (==0.37.1); extra == "azure"
Requires-Dist: secretstorage (<3); extra == "azure"
Requires-Dist: ansible[azure] (==2.5.0a1); extra == "azure"
Requires-Dist: azure-storage (==0.35.1); extra == "azure"
Requires-Dist: cwltool (==1.0.20190906054215); extra == "cwl"
Requires-Dist: schema-salad (<5,>=4.5.20190815125611); extra == "cwl"
Requires-Dist: galaxy-lib (==18.9.2); extra == "cwl"
Requires-Dist: pynacl (==1.1.2); extra == "encryption"
Requires-Dist: gcs-oauth2-boto-plugin (==1.14); extra == "google"
Requires-Dist: apache-libcloud (==2.2.1); extra == "google"
Requires-Dist: google-cloud-storage (==1.6.0); extra == "google"
Requires-Dist: htcondor (>=8.6.0); sys_platform != "darwin" and extra == "htcondor"
Requires-Dist: kubernetes (<11,>=10); extra == "kubernetes"
Requires-Dist: pymesos (==0.3.7); extra == "mesos"
Requires-Dist: psutil (<6,>=3.0.1); extra == "mesos"
Provides-Extra: all
Provides-Extra: aws
Provides-Extra: azure
Provides-Extra: cwl
Provides-Extra: encryption
Provides-Extra: google
Provides-Extra: htcondor
Provides-Extra: kubernetes
Provides-Extra: mesos
Provides-Extra: wdl
[No description]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.34.2)
Root-Is-Purelib: true
Tag: py2-none-any

RECORD

Path Digest Size
toil/__init__.py sha256=yuTOQ7U40_SnSkE0MslZnsYrgH1GeAr5guWEXUVDEDk 29361
toil/common.py sha256=EzuGpzktr51M6kc2WSkje47Gz2IWxGVGLxdKAXqtznA 65203
toil/deferred.py sha256=PHMjp8FTnvj5psQcNnH1GFJbMrMIQ15srDrqS2P3VMc 13022
toil/job.py sha256=aI5w9-YlPRGU7hKCVX04_8IVinEsaJqq9dS-rreW9Nk 83086
toil/jobGraph.py sha256=ue-i6W0Cesq_gfKZ6uND8Q0NQaPHsGWCwxNtVeZTtWg 9958
toil/leader.py sha256=mP9KZmxHId7YMvT4BBz9bm2E1_BbCv-5TSGR2IvLI3c 52359
toil/realtimeLogger.py sha256=w_l25-XgSiKx6uo3H6kuP4RpeDCrAMDsQ_-YCOGMqTk 9540
toil/resource.py sha256=te4RsE8OnOv7v6AYpUs4yhlM7qnlYsXSTWcj9HDEjrI 23662
toil/serviceManager.py sha256=Hc5KdL1GyPc_WG6y3oDQPynuMp-PY8GlQ1S56ace5T0 10873
toil/statsAndLogging.py sha256=uPWSdTRXL5chJUwUWr0OiyQRGTqX8lV0QasY85OPk7k 6869
toil/toilState.py sha256=vWaIXrqhiISPd-31nulnnPt2UJ7BOu2FmrQ3PD2LHfA 8266
toil/version.py sha256=lAQl9FPtXN5zEITUR_jw5k_3ROJ6702R6xjvn-TT7GU 467
toil/worker.py sha256=dtUGOyKRWOjVFRVZYDcMDi8BJtSydUdVp5Gw1zbcuYI 25665
toil/batchSystems/__init__.py sha256=B0yjmoy2-JSzRWFP5pOCn7oSubXiMcu9kBI-49cSius 2103
toil/batchSystems/abstractBatchSystem.py sha256=pkZRholk2WkWztNeqj4G8S_bulXvMUsGQlr3l_n4UCs 20544
toil/batchSystems/abstractGridEngineBatchSystem.py sha256=j2lGSF5mHIiagpvLitQEPu2IoaeuJswnkR1idWk8gK0 15868
toil/batchSystems/gridengine.py sha256=3LuR5Puv5dh73t3-K6o1QIOZ8oq74R18vIsiSRRjFHA 7134
toil/batchSystems/htcondor.py sha256=KgWfBKdnvW-IdrniYdZ43qCARKsMs2K-s0kKbFmjrqo 14206
toil/batchSystems/kubernetes.py sha256=fGUeB4qdzKkpOvxbtunu5jwDG5XO43s-X46cvWdfoeo 34406
toil/batchSystems/lsf.py sha256=9gCW7UfbXY0LKF14F_UQ3Be6n9VUerB--heUacAVpCU 12771
toil/batchSystems/lsfHelper.py sha256=rbuEJUva8PLQAZ5Vwc5iVldNWpYaoGP0ASVX0lWw6ac 6091
toil/batchSystems/options.py sha256=XFoyShUjjgt6-3qPDI78r0SLmEzWviRnELBCtuk3ODI 7537
toil/batchSystems/parasol.py sha256=aoMRy9Uu8rErW9l-z9UfwTzxyLqDQaLSbUrRDJFL0U4 16642
toil/batchSystems/parasolTestSupport.py sha256=BfX4olfyNJeWbaVoLpjLwL70rYgyTmOZpUYBJvCYMCU 4457
toil/batchSystems/registry.py sha256=llpVzELLtvKT_VmTfwN7BLWm_mQ7Qf2-pet5iyxirs8 3355
toil/batchSystems/singleMachine.py sha256=vABlGWTX0HR_ELibQS369aQgN7EHeEZMq429r14dhNw 16711
toil/batchSystems/slurm.py sha256=tBu1u_VvM3oMZd5FJinMvZJJwuzDSjHx7TlH8tIbVNA 10697
toil/batchSystems/torque.py sha256=oGZRkUu3fcpr7k0cHLp6dCGJg6qJSfQnSZP-5-S2eMo 10550
toil/batchSystems/mesos/__init__.py sha256=OgO9CTtxwUXOpR9j45MP48C27TRxsX5z02c83CXpP4U 3501
toil/batchSystems/mesos/batchSystem.py sha256=rMJ72nuo_-FZ7HfHFonkA0n2PFY-jlMExBrj77b3xkk 37338
toil/batchSystems/mesos/conftest.py sha256=ZgJ057tz5Vv_-uF05L0enGWmq0O_y-qgBAxkvs_N5Cw 822
toil/batchSystems/mesos/executor.py sha256=jmnIBDwuHPkqQcQhWbSKAOb4C7iwfdTUg0sJbZmAUkY 12661
toil/batchSystems/mesos/test/__init__.py sha256=828pIZp7FObK7DfzbftX7vQzWxTXqYKKz8vv8INd8es 5137
toil/cwl/__init__.py sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs 1
toil/cwl/conftest.py sha256=p42D7Of-xla9VOwl85sYdFPmS4Z2OULvmzvgh5TsBDM 777
toil/cwl/cwltoil.py sha256=An91BGyT8JXXlHTijc7O-JHzAGRsAYerDwwHxUVuGi8 58214
toil/fileStores/__init__.py sha256=qyvmFXNhXNqUeaB0EEbZxL0XghnNoapNatReyskA1R4 2114
toil/fileStores/abstractFileStore.py sha256=VUnZs-98u0mNul_U7htfDpdDn5o-O777e9DL6dV1UAY 20658
toil/fileStores/cachingFileStore.py sha256=I6nWZrkEEjNvStmXWSQUlQruXebjM3gNzWcJTUqmkl4 78642
toil/fileStores/nonCachingFileStore.py sha256=Qa_fEecemzTXXhx8PTb_4ge-yegXnS04PZiBAB3wlfQ 12563
toil/jobStores/__init__.py sha256=0hbPrJxtBleYYKT-3-8UYpvVJytZFIVKT3bgNFpooJk 706
toil/jobStores/abstractJobStore.py sha256=UiiGp0L2AxOwBHScCfELmKvgUlODvN7n26Z6QNbm3l8 43779
toil/jobStores/azureJobStore.py sha256=Y3i40T1LKfPOtAQ1PQHNPwiOmq2rpF2XxN9ffTbN4qk 33360
toil/jobStores/conftest.py sha256=0zL2-laUaMEZ0T3R87j0uc7obNc8SibPag1QENXdicM 856
toil/jobStores/fileJobStore.py sha256=ZLHBtSr90wwRnsvhWQkLHNOf2O1UI9wcD5S3hZf48Ks 35952
toil/jobStores/googleJobStore.py sha256=1Vk16M5UWM2fP4jREbuSbBFE6cVIl0ybpUfpLeokdAc 19573
toil/jobStores/utils.py sha256=RwgqZSEKkou0ftL7reX76OdJ36UAgRcazK0BMhtKq7o 8633
toil/jobStores/aws/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/jobStores/aws/jobStore.py sha256=S_At95O5BSktbqd-b9Df0szNDBV0RV4sEu0ODIOI6b8 59463
toil/jobStores/aws/utils.py sha256=NVhov8hNp9GB618jU847Z688zEKI79UQDj_zidA6YHo 15787
toil/lib/__init__.py sha256=eSGeOpjG1FC9_dIs3NEvg2JyJSNBFCkA9tzlfEzVbEs 651
toil/lib/bioio.py sha256=Zyv7gZzI6Tol8LDLLDCjRRRCJef3JhouSXTv-s6InX4 12299
toil/lib/compatibility.py sha256=mwI_aq4Iwyl_8C0tkvohqMp7DZ7SKWZsJsNFJLqhEL8 621
toil/lib/context.py sha256=B28j2qm7RAgBOdCKBCjURIzWOkQyOP8pjai2Czu3-Ro 19989
toil/lib/docker.py sha256=INkgylpEu6Zw-QKsyrW1nr8OFhytmd_MYI732SiAjnk 16516
toil/lib/ec2.py sha256=EEQsamBljlyh3uYqSEztnu-jW04auw1RDd9T_996b6M 9780
toil/lib/ec2nodes.py sha256=v5leG9EeJnMN1LiH4dR7lqEpQOS2b1UjhFjVkLGrLnU 12159
toil/lib/exceptions.py sha256=HTLx_rhKXgTEauNTnT_MD7JTtS5_iu2BJm6RCmLoTeg 2107
toil/lib/expando.py sha256=6kc7mhgLG6CmjKAPw94avIcuzGZh4kbFGAC_cZP5ILw 2977
toil/lib/fnmatch.py sha256=J8UQV1AdxQy1B0AQ0MQUP3WxyUJAhFEXriKkZk7DhkM 4644
toil/lib/generatedEC2Lists.py sha256=nBqKe2m0wUuPEL03ptUUNF0mMaWpiT3TrSvqhTAglHM 53053
toil/lib/humanize.py sha256=NMw6QH5lq4uxG3-KuZSUsUWgTaUKiUpUHwakPajcqQM 2233
toil/lib/iterables.py sha256=DVSX7__JnODYZ6SMr3Ogk-x3T9Vs2r-G1lgPXPngxrU 3646
toil/lib/memoize.py sha256=xDhy3GeWccFnHFr_5i3jyIo2z7M9ZPnq1mFZsuYBu0Y 6356
toil/lib/message.py sha256=jobUvtuIb9enABBGpMtacCQw2zC-mk7wNVpsgH-uKTc 1771
toil/lib/misc.py sha256=s6wTR3lsKpHHExnmOLk_op_cWoZvOjf95eFhWUBUXDY 5172
toil/lib/objects.py sha256=2N43bKJnHWNtcjnKfGYqUvYrMTnvFKBPHLkaXR0VLpc 7617
toil/lib/retry.py sha256=6D4blnSsb9wR9luNRUTXMEH6pTS1OZrCFTURyKWC5wk 5671
toil/lib/threading.py sha256=2rbHRv2lnFxQgcw9cqfdUJKO-S_ft9ag-yXGH2w7w-c 3114
toil/lib/throttle.py sha256=DBBG-8h4u6tMVKMMAeN5cWFE_I6fo4sBOn6fcWH6UeE 7302
toil/lib/encryption/__init__.py sha256=Qmfvo0n2iC2lhmfAe_Dt7_n2E_QsdXLO-MDeu_Krivg 728
toil/lib/encryption/_dummy.py sha256=8VO4yMiWIyBcd74z20vB6sdDW2nVOlyv3v8uY_2BNFg 1070
toil/lib/encryption/_nacl.py sha256=LICNsyhA-U5paYHDdlTfi8s-hasiiYfJIbqri8GKGEo 3884
toil/lib/encryption/conftest.py sha256=xOC-Uh8VaJQJXI_1Dsu7BkNp1sfwkp8ypAWlvrjNSYI 159
toil/provisioners/__init__.py sha256=8XDdMmrgJ-AVvkWzdSOBmNwdnAe-xhWaEsrKXK0x9MA 2291
toil/provisioners/abstractProvisioner.py sha256=HHX5qQMizs3-Mtta8w_1ytmhEUEXG3RoBqeOhlQxJZ0 15038
toil/provisioners/ansibleDriver.py sha256=qkSv8M95S_qZSMtu7Z6EcPR4o7pfpHD1mYLeX5iBqBw 2119
toil/provisioners/clusterScaler.py sha256=-TtmuZkelbt1wg6nyBJKSIEdrKvTbxWQiaA2RmIxsZc 48193
toil/provisioners/gceProvisioner.py sha256=Dp8Qqm899yLZjQJqmegNiziWkfovMBTydf3XwUry9Bw 22122
toil/provisioners/node.py sha256=kwmedXJrsAx4eLv2Mc85Grxakl3D7RXKBCwAA06lUms 12811
toil/provisioners/aws/__init__.py sha256=4akFPYC_jlDKjw3gFg50TcQYEr2L2l1XhyrVdcn1wt0 10695
toil/provisioners/aws/awsProvisioner.py sha256=YY5ZLjOkN1SLsVdDY-QLdc4HkqCn6_9RZzYi3MbShOc 29738
toil/provisioners/azure/__init__.py sha256=beeo-ng7teanAbdlrpMR2aT2TmK9LVTW6C0hEjOrODA 612
toil/provisioners/azure/azureProvisioner.py sha256=watrsJ5oCECAep7kA0SMD_E-nWumrbJgE3nJCjwycOI 17132
toil/provisioners/azure/create-azure-cluster.yml sha256=jjcqEjS6muKSgx9bWsMxEe_7exsJirZnJimzoyHgcac 2007
toil/provisioners/azure/create-azure-resourcegroup.yml sha256=3AYWXlnGZ_CQ3C5tI_1p6wmidihdwmWhRmN7uq3S_ts 992
toil/provisioners/azure/create-azure-vm.yml sha256=kBpK9hOl4bWzZ8ZPGph7UNNM8Fp2O8S2JA8XRJRdYZo 2134
toil/provisioners/azure/delete-azure-cluster.yml sha256=7BfCZ8igKYyW3QXQlTw203-F_7SrJNjGQEv1IoJGMTc 303
toil/provisioners/azure/delete-azure-vm.yml sha256=gfSo8_O2VNRhf-artQ_gJ9p6jIeHf0VyeH5XlCV2sfo 1356
toil/test/__init__.py sha256=t6h4MUFdBaa8-FeSS-JchIh78tF4bu4MbHJ0fzWQ7FI 36156
toil/utils/__init__.py sha256=wWCDR6SMOPVMUYgpsO7g4OZe7_ImT7rPA_yFrSFrH7k 1827
toil/utils/toilClean.py sha256=nx_e4bQALiFs7Zgxp2obNLiZuUBKLqSPJTB5iUIvRO0 1569
toil/utils/toilDebugFile.py sha256=Ut92EgGHwEWBL0vv6AcRD6Yd-Tk7nNjn89R7f6c0_rg 6338
toil/utils/toilDebugJob.py sha256=IhUXbVPXo7kqTmJivmaZnQ3AflVQHwfHDv0sua9OiKc 2595
toil/utils/toilDestroyCluster.py sha256=eageRIiSOAV8j5GNQUUd7xMG-87b7heL9U4IMmh6OG8 1161
toil/utils/toilKill.py sha256=NAjJVaiJbL8FLBaKVfjZMXSVNRRZDXVFOepvvleQ74s 2686
toil/utils/toilLaunchCluster.py sha256=XSNoNpxVtkTDxdyO3vcfaQlaoL8qtvhnivutXHaK2x0 9506
toil/utils/toilMain.py sha256=jbA66T3jm_ikzRS00auWDdg1H6d-yVL9Cd29SGlhajA 2195
toil/utils/toilRsyncCluster.py sha256=_uNlOLBDnkPu2S277R8egVQjHjxpu9HFMZ7fVJLHKbk 1974
toil/utils/toilSshCluster.py sha256=63C9TsCOzQz1zuNTlEQoTh5T6TIRmGexycp8lRySBV0 1812
toil/utils/toilStats.py sha256=9nbUkV2oB-tTvFsIVhSkqP3h-CTiKoQPDkOzs2GAzPk 24105
toil/utils/toilStatus.py sha256=sFf9uj7n2xPBvSavlfVtcWXv9avLAs1vYivRT4sbm5w 15272
toil/utils/toilUpdateEC2Instances.py sha256=ujD4I1UX18U_CePiXnbQ9Nnr50ICBaUl3__oIXHDRzA 1327
toil/wdl/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/wdl/toilwdl.py sha256=CeTsz97o-Zqv3K5lH2YeoWusY2bFuDavvZrjKHv7WM0 6780
toil/wdl/wdl_analysis.py sha256=EkauJSjc6jiGL6E1PWMGgE-gTBrfj0r7J5SLreOZXk0 45772
toil/wdl/wdl_functions.py sha256=DpSQCyxNwiMkN15UE_JPmVz4XB5mVGBteZn_sLsO4wU 18746
toil/wdl/wdl_parser.py sha256=8r8KALCZIIFN7UUzIVFAdP7NvxrPwBw5ScdC_vICUF8 155837
toil/wdl/wdl_synthesis.py sha256=vq4pkxCaOiF4PZY9iGHI6FudxgjkQ2LzxVYTlsIC5m8 44091
toil_msk-3.21.1.dist-info/LICENSE sha256=FPaTNB9xyeCT60XXXq2Bn4FGN9392OxN5jixnV_XXyo 11516
toil_msk-3.21.1.dist-info/METADATA sha256=Ko_Bm7xLIX47-BjKzUrIRkvw5kJteBVZP_GtSDLXvqc 4075
toil_msk-3.21.1.dist-info/WHEEL sha256=CbUdLTqD3-4zWemf83rgR_2_MC4TeXw9qXwrXte5w4w 92
toil_msk-3.21.1.dist-info/entry_points.txt sha256=2qwxnk-1cJa1p0C9tdEqkljW_PBNQSU30B_Nr8PD53A 355
toil_msk-3.21.1.dist-info/top_level.txt sha256=1ydj7IXvHS9tMT5OVTSSpub6ZOaQeIn3KGCgJqaikF0 5
toil_msk-3.21.1.dist-info/RECORD

top_level.txt

toil

entry_points.txt

_toil_kubernetes_executor = toil.batchSystems.kubernetes:executor [kubernetes]
_toil_mesos_executor = toil.batchSystems.mesos.executor:main [mesos]
_toil_worker = toil.worker:main
cwltoil = toil.cwl.cwltoil:main [cwl]
toil = toil.utils.toilMain:main
toil-cwl-runner = toil.cwl.cwltoil:main [cwl]
toil-wdl-runner = toil.wdl.toilwdl:main