toil

View on PyPIReverse Dependencies (13)

8.0.0 toil-8.0.0-py3-none-any.whl

Wheel Details

Project: toil
Version: 8.0.0
Filename: toil-8.0.0-py3-none-any.whl
Download: [link]
Size: 1019687
MD5: 08a188730dc8b53cf94bfcafde20ebac
SHA256: 7b94ef9f30d9d96dbba2dc9b43a7d50a2fa3f8efdd7159d2329c70c469796df8
Uploaded: 2025-02-12 18:46:05 +0000

dist-info

METADATA

Metadata-Version: 2.2
Name: toil
Version: 8.0.0
Summary: Pipeline management software for clusters.
Author: Benedict Paten and the Toil community
Author-Email: toil-community[at]googlegroups.com
Home-Page: https://github.com/DataBiosphere/toil
License: Apache License v2.0
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Healthcare Industry
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: POSIX
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Astronomy
Classifier: Topic :: Scientific/Engineering :: Atmospheric Science
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
Classifier: Topic :: System :: Distributed Computing
Classifier: Topic :: Utilities
Requires-Python: >=3.9
Requires-Dist: dill (<0.4,>=0.3.2)
Requires-Dist: requests (<=2.31.0)
Requires-Dist: docker (<8,>=6.1.0)
Requires-Dist: urllib3 (<3,>=1.26.0)
Requires-Dist: python-dateutil
Requires-Dist: psutil (<7,>=6.1.0)
Requires-Dist: PyPubSub (<5,>=4.0.3)
Requires-Dist: addict (<2.5,>=2.2.1)
Requires-Dist: backports.zoneinfo[tzdata]; python_version < "3.9"
Requires-Dist: enlighten (<2,>=1.5.2)
Requires-Dist: configargparse (<2,>=1.7)
Requires-Dist: ruamel.yaml (>=0.15)
Requires-Dist: pyyaml (<7,>=6)
Requires-Dist: typing-extensions (<5,>=4.6.2)
Requires-Dist: coloredlogs (<16,>=15)
Requires-Dist: boto3-stubs[autoscaling,boto3,ec2,iam,s3,sdb,sts] (<2,>=1.28.3.post2); extra == "aws"
Requires-Dist: mypy-boto3-iam (<2,>=1.28.3.post2); extra == "aws"
Requires-Dist: mypy-boto3-s3 (<2,>=1.28.3.post2); extra == "aws"
Requires-Dist: moto (<6,>=5.0.3); extra == "aws"
Requires-Dist: ec2_metadata (<3); extra == "aws"
Requires-Dist: cwltool (==3.1.20250110105449); extra == "cwl"
Requires-Dist: schema-salad (<9,>=8.4.20230128170514); extra == "cwl"
Requires-Dist: galaxy-tool-util (<25); extra == "cwl"
Requires-Dist: galaxy-util (<25); extra == "cwl"
Requires-Dist: ruamel.yaml (<=0.19,>=0.15); extra == "cwl"
Requires-Dist: ruamel.yaml.clib (>=0.2.6); extra == "cwl"
Requires-Dist: networkx (!=2.8.1,<4); extra == "cwl"
Requires-Dist: CacheControl[filecache]; extra == "cwl"
Requires-Dist: cwl-utils (>=0.36); extra == "cwl"
Requires-Dist: pynacl (<2,>=1.4.0); extra == "encryption"
Requires-Dist: apache-libcloud (<3,>=2.2.1); extra == "google"
Requires-Dist: google-cloud-storage (<=2.8.0,>=2); extra == "google"
Requires-Dist: google-auth (<3,>=2.18.1); extra == "google"
Requires-Dist: kubernetes (<33,>=12.0.1); extra == "kubernetes"
Requires-Dist: kubernetes-stubs (==v22.6.0post1); extra == "kubernetes"
Requires-Dist: types-urllib3; extra == "kubernetes"
Requires-Dist: types-PyYAML; extra == "kubernetes"
Requires-Dist: idna (>=2); extra == "kubernetes"
Requires-Dist: miniwdl (==1.12.1); extra == "wdl"
Requires-Dist: wdlparse (==0.1.0); extra == "wdl"
Requires-Dist: graphlib-backport (==1.0); python_version < "3.9" and extra == "wdl"
Requires-Dist: connexion[swagger-ui] (<4,>=2.10.0); extra == "server"
Requires-Dist: flask (<4,>=2.0); extra == "server"
Requires-Dist: werkzeug (<4,>=2.0); extra == "server"
Requires-Dist: flask-cors (==5.0.0); extra == "server"
Requires-Dist: gunicorn (==23.0.0); extra == "server"
Requires-Dist: celery (<6,>=5.1.0); extra == "server"
Requires-Dist: wes-service (<5,>=4.0.0); extra == "server"
Requires-Dist: ruamel.yaml (<0.19,>=0.15); extra == "server"
Requires-Dist: htcondor (<25,>=23.6.0); sys_platform != "darwin" and extra == "htcondor"
Requires-Dist: pymesos (<0.4,>=0.3.15); python_version < "3.11" and extra == "mesos"
Requires-Dist: boto3-stubs[autoscaling,boto3,ec2,iam,s3,sdb,sts] (<2,>=1.28.3.post2); extra == "all"
Requires-Dist: mypy-boto3-iam (<2,>=1.28.3.post2); extra == "all"
Requires-Dist: mypy-boto3-s3 (<2,>=1.28.3.post2); extra == "all"
Requires-Dist: moto (<6,>=5.0.3); extra == "all"
Requires-Dist: ec2_metadata (<3); extra == "all"
Requires-Dist: cwltool (==3.1.20250110105449); extra == "all"
Requires-Dist: schema-salad (<9,>=8.4.20230128170514); extra == "all"
Requires-Dist: galaxy-tool-util (<25); extra == "all"
Requires-Dist: galaxy-util (<25); extra == "all"
Requires-Dist: ruamel.yaml (<=0.19,>=0.15); extra == "all"
Requires-Dist: ruamel.yaml.clib (>=0.2.6); extra == "all"
Requires-Dist: networkx (!=2.8.1,<4); extra == "all"
Requires-Dist: CacheControl[filecache]; extra == "all"
Requires-Dist: cwl-utils (>=0.36); extra == "all"
Requires-Dist: pynacl (<2,>=1.4.0); extra == "all"
Requires-Dist: apache-libcloud (<3,>=2.2.1); extra == "all"
Requires-Dist: google-cloud-storage (<=2.8.0,>=2); extra == "all"
Requires-Dist: google-auth (<3,>=2.18.1); extra == "all"
Requires-Dist: kubernetes (<33,>=12.0.1); extra == "all"
Requires-Dist: kubernetes-stubs (==v22.6.0post1); extra == "all"
Requires-Dist: types-urllib3; extra == "all"
Requires-Dist: types-PyYAML; extra == "all"
Requires-Dist: idna (>=2); extra == "all"
Requires-Dist: miniwdl (==1.12.1); extra == "all"
Requires-Dist: wdlparse (==0.1.0); extra == "all"
Requires-Dist: graphlib-backport (==1.0); python_version < "3.9" and extra == "all"
Requires-Dist: connexion[swagger-ui] (<4,>=2.10.0); extra == "all"
Requires-Dist: flask (<4,>=2.0); extra == "all"
Requires-Dist: werkzeug (<4,>=2.0); extra == "all"
Requires-Dist: flask-cors (==5.0.0); extra == "all"
Requires-Dist: gunicorn (==23.0.0); extra == "all"
Requires-Dist: celery (<6,>=5.1.0); extra == "all"
Requires-Dist: wes-service (<5,>=4.0.0); extra == "all"
Requires-Dist: ruamel.yaml (<0.19,>=0.15); extra == "all"
Requires-Dist: pymesos (<0.4,>=0.3.15); python_version < "3.11" and extra == "all"
Provides-Extra: aws
Provides-Extra: cwl
Provides-Extra: encryption
Provides-Extra: google
Provides-Extra: kubernetes
Provides-Extra: wdl
Provides-Extra: server
Provides-Extra: htcondor
Provides-Extra: mesos
Provides-Extra: all
Description-Content-Type: text/x-rst
Dynamic: author
Dynamic: author-email
Dynamic: classifier
Dynamic: description
Dynamic: description-content-type
Dynamic: home-page
Dynamic: license
Dynamic: provides-extra
Dynamic: requires-dist
Dynamic: requires-python
Dynamic: summary
License-File: LICENSE
[Description omitted; length: 1740 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.8.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
toil/__init__.py sha256=v0u19Zmd-JKCWBr2jn8Eal4oXMOm-sY5MSSnqUIhfH8 19300
toil/bus.py sha256=Hi2TTCVGX4WTw67BOKo7l9yZw9Ln_zcobJzQxrfge4M 29938
toil/common.py sha256=EwIN1Ith42OJsSknXwVk7tZ3SFyuHne13_jPZUxP6WE 75521
toil/deferred.py sha256=2ShsuPqDwu0jhBQ6ocMwe4lfNegBm2lj7dOG9E7X3Zc 14152
toil/exceptions.py sha256=oL2d9uutwtcPkMcEUGrixKUd4y1JLSA0-N7hNJqCLSk 1883
toil/job.py sha256=Bpj5bi5NPzkUMrG4mbEbkFHHWheqZwZbGRHAtKFZPWw 173199
toil/leader.py sha256=ubIdkEUb3hmGAc7oCWnKuvxOAlyyvOgVyDCN4i6DJAw 85101
toil/realtimeLogger.py sha256=2O4AUaKtvItzzCAQKORIEHZ2cDoLf_6njoKWv_uzdFc 9878
toil/resource.py sha256=PlI6R28aYqfYLDsztjlAYpkVGfSr2O0DhrgDXpXJxa0 25650
toil/serviceManager.py sha256=GE5IUjQmNrekYv9tclim0RlCFf4ueOQ2H4qHjMBrOcg 19978
toil/statsAndLogging.py sha256=Nq4bwpieQVmJNpj6vuN8zdM_yVRA2pKpcJGcxOn7SWI 17152
toil/toilState.py sha256=DD52XQv8wRCYzF7-F6Olqa_k6u-_py-JWyjqJHRh6Z0 17989
toil/version.py sha256=0ff-z3yLFu7Q8r18rieIWcRnUVqARJPAA8YN_omkeTc 488
toil/worker.py sha256=-V5aL9-5fq2muPZKGKix_D81R5bJrRjQ4fuHzyEq9WM 35998
toil/batchSystems/__init__.py sha256=T8psI5GmvE71_XmajKsfeQ3YUs6XM7rX1Fy9VNUX_-Q 1036
toil/batchSystems/abstractBatchSystem.py sha256=h8mbA_k_7EZqOrbcdQmKHDcAy6D2ZB77XXS3Wu4-E90 33542
toil/batchSystems/abstractGridEngineBatchSystem.py sha256=yR3nlCvJRcxYEDRyA3qYuNjvgmVDfzvW4bx9RY14TLg 24336
toil/batchSystems/awsBatch.py sha256=vpV6CxUBi0sj5b91cWKi7Gonk276Nfz0_-QLZVoahNQ 27298
toil/batchSystems/cleanup_support.py sha256=mpExAW-Tw2ZnGMgJEt06zZGjNLhXHPLVuDEraM9N8r4 4054
toil/batchSystems/contained_executor.py sha256=2wP3sDyOanB2YrXxhdJ1PI3VohKK37ifgRya2F0rcMY 5111
toil/batchSystems/gridengine.py sha256=OL1SOQXV5vz7UwNSSZ2lKTRArkeaVRND5FyqQ8K8V20 8114
toil/batchSystems/htcondor.py sha256=nCylLUvRyX2k79LYriJgwhmowJBRekBWYUSpJgtawsY 18613
toil/batchSystems/kubernetes.py sha256=5bC_ipdfgIzl2_I1SxqrcRHPjbcicBNznNK2c3u0gnY 86959
toil/batchSystems/local_support.py sha256=R-DT_G5jcQXjZyDQ9OdFj0KUeULMSmcLBen3p-tSGdw 3893
toil/batchSystems/lsf.py sha256=rQJe6dpnqs-LAZ0qaAo94VtxvhADwv8XzRTrQulp-mQ 18089
toil/batchSystems/lsfHelper.py sha256=IE5y-x-Mofau7jksWjBdTLt5dVvyj-w8dd3gqwZ-r8o 7227
toil/batchSystems/options.py sha256=qA6cIFIviI-5ogKwUaTHQkmVnJ7qzsNts8kI3xc49XU 8110
toil/batchSystems/registry.py sha256=eizqlhn4AdBzykdOFu_S5ZcU4eYpMB_vDTb8ml6W3Kw 6701
toil/batchSystems/singleMachine.py sha256=5qj9gr0bcT8RciNYM_eC-aHORdDSbdM4SGlam1SGlGw 40348
toil/batchSystems/slurm.py sha256=oaP_4axl2YBAWFSoK7khAwPCaTVihJTxtP2VRZQ-vn4 37000
toil/batchSystems/torque.py sha256=A3Pe1IvIltpJSoVulfEUrilr-Ok_8E9hf41jbHYYzjQ 11795
toil/batchSystems/mesos/__init__.py sha256=jkeRf24eXeOTdRibDzJtqKwXup47FseQS0UXKriKrxg 3554
toil/batchSystems/mesos/batchSystem.py sha256=-3COwXjaibZClIHfAgj98SVy2R2yK8UUCjWaOj-R0hM 40194
toil/batchSystems/mesos/conftest.py sha256=n1ZIXzZP0msJlZL_ZIG84trKifxFLRLr2uIr-EjDucQ 836
toil/batchSystems/mesos/executor.py sha256=ETsWkx0JaERw7YS5rzv23_xj492hKSxDOsanVilwy7Q 12729
toil/batchSystems/mesos/test/__init__.py sha256=qa4iDR9yGhZyViSvTyPH5wi6qIlKpKcC5-bj3uvB4PY 4718
toil/cwl/__init__.py sha256=lfyX1eoJ1IA26AUzUl6-ODTi0ZqD_0F6-rL5eqfl_9E 2131
toil/cwl/conftest.py sha256=R6Jw5-PeTCK0rapfHmV_VJwVcqlVbO5w3cFUbaIWUnk 848
toil/cwl/cwltoil.py sha256=aHc1lqQd9sPaJshg4A--qtkH9pyBAB8XpQfRH14vkU0 181589
toil/cwl/utils.py sha256=CV69GfCEJ1uvAlbDPJKq42Ed19vBE2E5F7v5MZJK7Gw 8023
toil/fileStores/__init__.py sha256=xbcTdb31JXsLPxBbL3P5lm8XZlHNBohHPyawXNnZLOs 2388
toil/fileStores/abstractFileStore.py sha256=g_gViwfPqYOjGOTQCXrHOulQanump6P0SPirvX6ZqWQ 30851
toil/fileStores/cachingFileStore.py sha256=g5e4sV3XYkvpv6ZjbEuRc9KreX57RJtr4vOvxV_B4rw 101746
toil/fileStores/nonCachingFileStore.py sha256=VsPoKz0Ln5HP-trLlAarqhqJIzdwpADfu8E_UJH4X9w 15806
toil/jobStores/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/jobStores/abstractJobStore.py sha256=igIKcOQKOsgVqHQTD9PvWqFgjkBDttdbPM1LP-Gzsl0 78640
toil/jobStores/conftest.py sha256=xNy_u3dGZz0206dnixzYvAvT85a0HfkIJw9XbsiGJnM 837
toil/jobStores/fileJobStore.py sha256=r8rymME47BTjGW5a_kb1QDTWF4MDGNrrXtAc8qwpfIk 52035
toil/jobStores/googleJobStore.py sha256=xcBWTsM35MyfzYwGZJmqBXOTFMBFHTUFDO0tqc5ALgY 24414
toil/jobStores/utils.py sha256=R1NKkyHC9txT7KMXAoa51aNOJJOHx7HloPqI7PD6ipA 15521
toil/jobStores/aws/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/jobStores/aws/jobStore.py sha256=jJkYnNESOJbGYZ-eydFQjKSxWAe3p9dkXx8r0NQSTPg 88359
toil/jobStores/aws/utils.py sha256=GDSNhcwgkhyrq1YDdYJscg1gjFyGpGxIARUYH3cMvPw 20584
toil/lib/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/lib/accelerators.py sha256=HgDO5rgz-9tU_-fLfScABliMH3VdYSVt-juKfQsUenQ 7937
toil/lib/bioio.py sha256=lB9fuyOjWtNZfQCc4x2WzGK3x3xDaq6kW8Ghj1wOchc 2384
toil/lib/compatibility.py sha256=pPPTJyk3GUZ8SdAv14a3v2HLWbNtcnsAFuCEbh36UZ4 1535
toil/lib/conversions.py sha256=CuOHhxpS8RFdp9U-oLSWmhSNLMKT7lqG5N5uhvxfCK4 5135
toil/lib/docker.py sha256=IUWvImtzdaPrCqhzVmTrknXXpgPef23DLUsslZ7KInE 20036
toil/lib/ec2.py sha256=gceJSDOlhiD0jtKs0e7rS8ploctt-fhJHzrYHr1_lcw 25570
toil/lib/ec2nodes.py sha256=uydhQaTlr_ISjb658MWocL5CRhbzJb6T-OqqylkC-Q0 14668
toil/lib/exceptions.py sha256=lj9oMa1B10TDeJ-7-xgL48Qrx6PExNrLUE2ZCdWQ2BQ 2946
toil/lib/expando.py sha256=JN8dbYk5K48Dwmvb_3bCkO6NYbb89iL0CRchg3_FyFA 2924
toil/lib/ftp_utils.py sha256=VqrstWP6dKJnTHtrxGPp7dzeDpyaD4IR4I5NKrPR3g0 7598
toil/lib/generatedEC2Lists.py sha256=pcdygnoZLokhhihbzm3YMNtXsNZSsvrhjYFA784qeag 274723
toil/lib/humanize.py sha256=6uXOB07rvAxO8jpIh2kPwy9bfoDu0eEUmBGz9m1chS8 1267
toil/lib/integration.py sha256=vCFKjV-2K3T1LCZMqdgfCWDF4FAenGqTSflG_reg4vk 16163
toil/lib/io.py sha256=NX3bm7YGsxb6p76sVnRigweFZf12pfA-oXUs23l023U 12328
toil/lib/iterables.py sha256=gLbbxBzB0f-hhMRcCN9P-TDqNYK0myUKVCYBa9eJo-c 3459
toil/lib/memoize.py sha256=2ikkIOXfZv7LGsoEn8i2ojYTqqNmIIBhSCfBQxySIKg 3225
toil/lib/misc.py sha256=jCSSftkKiam_MrH9jAZKMMTBEH9CjTBiUUF8zernll0 6657
toil/lib/objects.py sha256=3XNMtBkNcIB2EMl5cteVDkuSRKAOpnd_GhxgTGVh43M 5381
toil/lib/resources.py sha256=KkfM3hSUwTT__Avh8jPxM0VlrXvqajGjnXScMSlqT7Y 4005
toil/lib/retry.py sha256=JFGxvx4BK981hqo4MvKoBX1KvJIVNxQafKEYx9MVEDE 22927
toil/lib/threading.py sha256=cdhEqrScvdtCELE0RUukXdV1nlyAlu-ya7DyVSbskrI 30921
toil/lib/throttle.py sha256=ua21juOmGI7JZP4pXdR8-s2TpF6PpwW3sg11a2gcrbI 4955
toil/lib/aws/__init__.py sha256=VI77J2o4IehFBpEUjS4eHmXlxEplFnKYHq6w8ZyotEk 7905
toil/lib/aws/ami.py sha256=SD728qocULXqWZmxPslcymukG-MxfNniMsBE9d1VVcM 9341
toil/lib/aws/iam.py sha256=6qNJ6C61XVzbuPX1p-tcnEcabCjIultrVe9MrgcME04 18550
toil/lib/aws/s3.py sha256=accn7bSneZttfb91pZR_80gDhCgVX7Z4ZOKOwM-6u9w 1156
toil/lib/aws/session.py sha256=xWtzP52v_Wf0hYTVnoIf0FrL-isXIgzZrwRPeW8ajnI 14543
toil/lib/aws/utils.py sha256=CFgg4g3f6I8kIyg8_JB18xzR5yk-WHZXk7cq_NXb_aU 19738
toil/lib/encryption/__init__.py sha256=HP19EUYJeIMdjZq11fLn_dXIGU98sIkpTxvMxvPaUSs 705
toil/lib/encryption/_dummy.py sha256=6e2fthd6YdgFUgY0kjGb2052KLWUeXD_ejeoCTAThLU 1082
toil/lib/encryption/_nacl.py sha256=_EL8LrF5T5DT0dhNIlyIxDB8c8irGe9nJVh1Sn7mFkA 3747
toil/lib/encryption/conftest.py sha256=jCrRo2AtsGaO6hitm-wkNOTAU78JWSVA52E0hZdMpq8 227
toil/options/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/options/common.py sha256=fNAOlnsLD_2on6gWHV8nTVikzlx_nrhaco6hLLlRbHo 45075
toil/options/cwl.py sha256=r2eMuOxbJaq8_mc25KLzzEjAvvWJqe2QfLHcXKidurg 13600
toil/options/runner.py sha256=7DxJLvcMm6CLwTZnPW1f9UmQKx1vw5Sq8VaqJDLzC7g 2388
toil/options/wdl.py sha256=PJ5qile1zus-Jwld8Sb3KmG8zzIIuYVJMj-8jmaRB6U 3167
toil/provisioners/__init__.py sha256=Z3OV95yx77LBVRUtjX_J8r_0OSC2glAIo5y7irbB-S0 9794
toil/provisioners/abstractProvisioner.py sha256=R3OuUV2p8GWWuRs2PbaHkjHufOLyoknUaHq4vKPVGMc 58000
toil/provisioners/clusterScaler.py sha256=9FgnSPbn2U_FYUSJUeN67A0kdh-Yl0roi5nZLeJVr_I 64980
toil/provisioners/gceProvisioner.py sha256=I0g5oNwsRAr3D-gimCIhk6xZZ-HB_Y3jzgOhMRGx86k 24182
toil/provisioners/node.py sha256=RFLXufNQhjiHUO5fBfbEBd4cbtSUWsNmiGcDDodioMI 15198
toil/provisioners/aws/__init__.py sha256=XmVkSuHGMvaMbDJ36yZHGkH5fsUJYJyi3V4R9MYw0Gs 8621
toil/provisioners/aws/awsProvisioner.py sha256=Fd2twLvxKeDKfPw-HoxOdgtJqLajwVVJ1VqhDqt-D0I 89097
toil/server/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/server/app.py sha256=Xi8ZYs0qKsg1ISNETiYjMtt_qxrou3NuHZcx9bu3MNU 7048
toil/server/celery_app.py sha256=PbdwRb7tY5MU4PkPgFZkq7CMiCe6LHBxw5YgcbdsKIE 663
toil/server/utils.py sha256=hSeRcdBMBkvS3iGRtF3jB5lVNcsTXJGS-7fV8czuJ4E 21919
toil/server/wsgi_app.py sha256=3V3xr80F4uJUzeBbTbPI1uKJ3FUcI-H_8T1eiiEM5iw 1959
toil/server/api_spec/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/server/api_spec/workflow_execution_service.swagger.yaml sha256=zZ2QepvbpvLROIcVIHWrcQLUwXEqGfm68fmkdrx8rw8 25377
toil/server/cli/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/server/cli/wes_cwl_runner.py sha256=vw3KKnoe_oof6PLxiJWenHev53YwVmpzc8N9FwZMoKk 18501
toil/server/wes/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/server/wes/abstract_backend.py sha256=d8IA2Fepwr9g6BU-CO3VBvODiPswsps9rPcOKUUvD8k 10202
toil/server/wes/amazon_wes_utils.py sha256=xRrV7hiWoWVwxJykgL2HQdMf1FZg73eqEBltKXya1Fc 10287
toil/server/wes/tasks.py sha256=DBjUUbxY6mq0H4aB8qiGhatmz6qWJWHkHPgfAqSr37w 24746
toil/server/wes/toil_backend.py sha256=GaBhjr2evNwV07QiAiQf6GgDRGxiX1SblkLTEa7-WFo 27499
toil/test/__init__.py sha256=HQBKUyJCEM1_kMz-aVsCKjOBZ0bT029gUlElfrE2sAE 45148
toil/test/batchSystems/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/batchSystems/batchSystemTest.py sha256=hMp5mmtGdWxnb4DIjCxy4m-BU9BeJ6n3w_-QF9ziYcg 55546
toil/test/batchSystems/batch_system_plugin_test.py sha256=KUVDjbXgxopEqTC4pAAwUePc-QrThxhChyaernYVpVM 2802
toil/test/batchSystems/test_gridengine.py sha256=kZCF7WIAmCF1LTPPWd4zC6piQr0UaKJ3kYKz5tsBal0 6353
toil/test/batchSystems/test_lsf_helper.py sha256=JICnAPvU7HfqJ0RhIpC-IFfHLKftOAAQF2Iqc7nFs30 4697
toil/test/batchSystems/test_slurm.py sha256=bCwVanzQf17c9IY9-bSiDAje1lHyCt2PUWUJZy9GKV4 19529
toil/test/cactus/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/cactus/test_cactus_integration.py sha256=4sRlsm7b29a08HNHFUbFu_gDW36TQeTfGBvRYUXNF_U 2219
toil/test/cwl/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/cwl/alwaysfails.cwl sha256=EWDfzxMG4WqH2YQErhIHYPVc7-1eyucEUboj8r7yVbA 210
toil/test/cwl/colon_test_output.cwl sha256=8evFOnHvpJEPn1lBI2zuEKueMUbh2p8oSNOKl-M4Ojw 401
toil/test/cwl/colon_test_output_job.yaml sha256=BbXFRuWsRJV6JpJAutnHywJl_AbwEcwNRszArfRecxs 72
toil/test/cwl/conditional_wf.cwl sha256=SAtUSmD5ta-DVG0SRHpT8EtOp8ztm-6v9Vskcl09c3s 357
toil/test/cwl/conditional_wf.yaml sha256=WsS9dlpbRUll9M56KspQdOJ8h6SASTW7eRELefa274E 24
toil/test/cwl/conftest.py sha256=okwzv8y-qDSIz--eauonzQXxj6DxyT-u8sXIUMmjxlE 698
toil/test/cwl/cwlTest.py sha256=t98io1NVD1LSwXRT8jzaLH97noUq5Hf2XDJQ34NZ6fc 63465
toil/test/cwl/directory_from_directory.cwl sha256=-hjZuUs5fMpKMnbj-FZAgcns4iWsCFJV6Qh7-fsRn1I 556
toil/test/cwl/download.cwl sha256=XQvz8or_-k6pwyhgeUeJOew0_b3BeHcF08EaalbySz4 296
toil/test/cwl/download_directory.cwl sha256=RdPmElFeHJqXGWVqEqR5VFMmXDiJubhTcM9hIrAhKY4 535
toil/test/cwl/download_subdirectory.cwl sha256=9xhggsaDvdA0fOUGOXWt853h1ir0KCKB4NhhAnYLKZ4 784
toil/test/cwl/echo-stderr.cwl sha256=M-j3robw02M6PWkhbDI3Yn1GDGRDteLGMMFvfhL56mQ 342
toil/test/cwl/echo-stdout-log-dir.cwl sha256=emXc_pJKCUI7zpN4c6WMeIRvAsvmibRA1vyHhQB3y4Y 228
toil/test/cwl/echo.cwl sha256=1_Pvhg7RmQq3wpYUhQT6iS0IR7MN_CY8UEdBWjWcQf4 183
toil/test/cwl/echo_string.cwl sha256=uBmj7qdRV3GFHQxbXvVeRqiOnqc2L-oHYELGGiJJC9M 845
toil/test/cwl/echo_string_scatter_capture_stdout.cwl sha256=5FGemb98l2SP0e3ajeHfeE9-FKrmKfDzQmFixxu_kJM 1090
toil/test/cwl/file_from_directory.cwl sha256=0SQUY6rJgqW9zhgX5RN-vjn1smDQweThAwKC5vy5fNk 536
toil/test/cwl/glob_dir.cwl sha256=3a1VRsCTMgY0he8lxa-7OJJIeDHBry83DIEHguuIBwk 236
toil/test/cwl/load_contents.cwl sha256=YASiGkUQPEa9dz6btNccARLI7sPppXmm5XaePIOpek8 464
toil/test/cwl/measure_default_memory.cwl sha256=ZGVgLpnKNxOobjOEWc7EF-spCrDqhYrBHx9MjnJm2ew 252
toil/test/cwl/mpi_simple.cwl sha256=xgsOk2yGbAHL3pwtCtxZd6_c9Lopl1xh32dO0D6-Qbc 470
toil/test/cwl/not_run_required_input.cwl sha256=DK8CeCEw8thWiqvoRQmFQcZq6I3HLrt_7gzbYk1te-c 836
toil/test/cwl/nvidia_smi.cwl sha256=peKLDFC9_0zEt7CoRLCQDtAE5bjfotok8Ljmn1nBVtA 474
toil/test/cwl/preemptible.cwl sha256=BLmrYR3nZX89p1I0-8vGuE-hqKEUbfsuY-CWDcf32BY 304
toil/test/cwl/preemptible_expression.cwl sha256=T_90Y6dBe9nDCjp8Hg4dv9xFsaWVsKSHv5nZ2mafBZ8 639
toil/test/cwl/revsort.cwl sha256=BDAyPb1Tpkp55I_XIiZ3_7dXzQJxxkXo_2CHSk5lcEw 2023
toil/test/cwl/revsort2.cwl sha256=LNXgxDVC2aIhPTTgOdDcKteDLmi3y3vPAFF_GdURCcQ 2024
toil/test/cwl/revtool.cwl sha256=qzl3FHpaF41KPpxP9yhrOxUCsSm1bjsr2XXFpBZ_LkM 1301
toil/test/cwl/revtool2.cwl sha256=CwJT3A6mmjBtneDzVDEfcYqoIerKm7A7A6UcyrVWrqo 767
toil/test/cwl/s3_secondary_file.cwl sha256=aHxO8EwWDxJb4CzuAt3VJfbQaHPQARLs7XVJ5DtMITs 378
toil/test/cwl/scatter_duplicate_outputs.cwl sha256=1ubeij5YQhjHe0igq5xL-Caje6gheIMfA5HKBJrBeh8 699
toil/test/cwl/seqtk_seq.cwl sha256=uR7wlwxlNLkA_hIFglgiWGoOftQqFk4sH7Wo5zF60-c 406
toil/test/cwl/sorttool.cwl sha256=c1fhFZ_ekTMuEAM0nikUPd2j-etPQL8MqyuSJLNadtc 1060
toil/test/cwl/stream.cwl sha256=jtyYdmSyCeI6uoOeX5Nb_LMIXhR5Sqmu8dGSr_Y2Z8g 732
toil/test/cwl/test_filename_conflict_detection.cwl sha256=wVrc9EXmO74tgaEe4oE-EMpmQiHIuUFbLh0-qVisVZo 699
toil/test/cwl/test_filename_conflict_detection_at_root.cwl sha256=G3clUTFeeGZt5xPi2SNs05W7I-RT0OEN2C8xKHzQ300 695
toil/test/cwl/test_filename_conflict_resolution.cwl sha256=sIoXi61RzCkzD1MTCoglRYAXo8xaE1JiC6irvSANK0I 717
toil/test/docs/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/docs/scriptsTest.py sha256=UKtoAhBejHE7ID0LxibGSoDaHaZXCBHJlMwXqv7KD6s 5806
toil/test/jobStores/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/jobStores/jobStoreTest.py sha256=QEma-WTO-9kzp298LJXVUifXc1yP3OutKa3D0G7opkY 69620
toil/test/lib/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/lib/dockerTest.py sha256=w9VZ7KHGz3eEdvV9McqT7NgXXWENkizubaEaiPDVeh4 15607
toil/test/lib/test_conversions.py sha256=JSwdTRYklpofPV3VANHC7vHZ7WcpEWOZD6G9Tkjd45w 7232
toil/test/lib/test_ec2.py sha256=p3GfCgSSLqZQ-oanHk1sdIuP1wVUwQvXKsXzWl5ow0I 4183
toil/test/lib/test_integration.py sha256=E87W-WiOqeHbHNou2d8Nb2GOhjH4XTKL9JH8esQpL2M 4634
toil/test/lib/test_misc.py sha256=X1o4Dw1PcbnS1Y_gTR2q4STwqRjXYjSEUy2Q1BxeijM 2766
toil/test/lib/aws/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/lib/aws/test_iam.py sha256=2YTrL6r0WIybOBFltU0bJ4XOADT6vlRRXfbsvexjBt8 6921
toil/test/lib/aws/test_s3.py sha256=NpYO0GnACbGpaKPwM0yeObxqBoFYJv92RUP7VdtompE 3061
toil/test/lib/aws/test_utils.py sha256=_JI_FfpyONfLE4HduibcAPF7_Y39MUx4H6wk7KqdWw8 2253
toil/test/mesos/MesosDataStructuresTest.py sha256=IcV-bNWJcMnij0WruhTk4RTmGROTTcU3pav5e4gHPfA 3225
toil/test/mesos/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/mesos/helloWorld.py sha256=xX65tKSBIKAxguBoAe-6Twp2XcBK1QEnKp5LRVImgK4 2204
toil/test/mesos/stress.py sha256=0_-l6SvPc0qgwF0bsJgMm1-cmKx-LZ1-_4XlfghPU7s 2126
toil/test/options/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/options/options.py sha256=xpp0PZKilYeXwkXUBszRZSC_LziX_rPi9shsQlemuuo 1474
toil/test/provisioners/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/provisioners/clusterScalerTest.py sha256=-Q5epOMHynfnlNZfpVXMU48puw_G9fyLiW8Gl8Qrk5o 44463
toil/test/provisioners/clusterTest.py sha256=rTBsPJVUtJJ3HFHPKyFiy3Tz22whisdNnZu9R5-gVv8 9658
toil/test/provisioners/gceProvisionerTest.py sha256=sB5aPWFx0xLuvkLuJaJrd1Lc-p_MutAfkMWKHxherZI 13601
toil/test/provisioners/provisionerTest.py sha256=_JAvTs9bjynVpRkJI0VLPHZw-Y7kHI9B1vaWR4RomKA 2179
toil/test/provisioners/restartScript.py sha256=GodLqsIiYNxXFWQtyYHrxACI1fSUeGzcltO6qOdznj4 416
toil/test/provisioners/aws/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/provisioners/aws/awsProvisionerTest.py sha256=aSAfNM0DDzkJU63ZHaCBtu-dwO5wc3Cup5IQ9o4XkNM 23710
toil/test/server/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/server/serverTest.py sha256=4daj22UNwzWXqTTTmgjDyIFeG8Js4iv-ZmBxeyHcjhs 27553
toil/test/sort/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/sort/restart_sort.py sha256=A-1pWMhSIHSbtib-u1rvOFbhRqW_mQlf6dEbelFs7Q0 11358
toil/test/sort/sort.py sha256=ty46x-3-8Gj21itM8V31HLRZN7JGLF37xPM5aIDx9dA 11187
toil/test/sort/sortTest.py sha256=0dUZ0RCzE66bRcmOHJUD5MFg4UkSRbwhnHVkzX54wI4 12239
toil/test/src/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/src/autoDeploymentTest.py sha256=Oqy3j-jBeMCgu66wrxkDVUKFdqvkQ7aMj7GN6gKG7cE 23947
toil/test/src/busTest.py sha256=HVmXGTet496PZ0f8qW6NVPz9kLZigBTo4aNWN6iTbAk 5409
toil/test/src/checkpointTest.py sha256=LahYir7B3FNttP4OhbiYFKjxIftjTiuIXHC83xsxzNI 4464
toil/test/src/deferredFunctionTest.py sha256=FP6VQ_eKPcSsxuhWx1n02G3Myu4D3RFUgMSN7Y2RY_8 13360
toil/test/src/dockerCheckTest.py sha256=CuXBewb1ba4rOO3YOrmChxPvdOfJGXNcT8P47HcaY1g 4407
toil/test/src/environmentTest.py sha256=k-WsZ3-9Xn0Vctd8tBQTPR_fVqY-f1VHC5U3_d7qdd4 4239
toil/test/src/fileStoreTest.py sha256=7Rh9qRGEB5nBdcerRz-7QLfq47pyfS1XQSKCOaQQS3w 73186
toil/test/src/helloWorldTest.py sha256=vPxXEYDZZuMynm_yQ5ZZPcm3AzXdYLT9bs0kP72OM2w 1727
toil/test/src/importExportFileTest.py sha256=mlYMR8jh967KgvX37yYmI-cd_E8bcqr7_LvBhiOkAzQ 7669
toil/test/src/jobDescriptionTest.py sha256=ops9NpnUa1aKGPrTOXU3jTwiDszCRJzHHAZzQx8bF10 4335
toil/test/src/jobEncapsulationTest.py sha256=K1Q2m_1ZrXC6OI5ms_JSltEsGvuE1O_M5rWST6VWiBg 2463
toil/test/src/jobFileStoreTest.py sha256=88slShZfPJgVrEP6pTwuVxPJ-cROwMzdIdgPlogdg18 8977
toil/test/src/jobServiceTest.py sha256=EDhU86qPUfK0yMZy8Kc1CAgTFt-s3YCPFmRfGsTsoGE 17510
toil/test/src/jobTest.py sha256=Kb-i3E-EDZQFFH4UuBQU0oduVBejeRY1zH_tlPWz6vc 27813
toil/test/src/miscTests.py sha256=lG1wozuqyXTq5_egV0bEbHtDnjM0b5CT0VpJYGV5clI 7798
toil/test/src/promisedRequirementTest.py sha256=Xu91RdffN5Vd0LWuIE4g4c1sc51SPB64KEhbqoU7XWY 9580
toil/test/src/promisesTest.py sha256=HpFIDWWkEjdEA-vIAyX_Rn9oYwFOHMvSDSlOkihy-PE 2318
toil/test/src/realtimeLoggerTest.py sha256=bvr7YDS_co48fmdKo-c0bBXn2fnzvUAFRMODNyTkvfQ 2443
toil/test/src/regularLogTest.py sha256=T6-rU_qKczGroLnoDVuZj1xcxJHVQvk2klwhFX9vfnk 4308
toil/test/src/resourceTest.py sha256=hE4KnAlKAAAYphSp-Edv9z3Q__jP2P3PVZGlZfPZL-0 11071
toil/test/src/restartDAGTest.py sha256=U6xLIBtOBH-FneR1JUA03bIEBreHuKR3jxCfDum4dic 6227
toil/test/src/resumabilityTest.py sha256=8PpAWCkgdAEvKCneOVGGaY77sxTSbPgJyN_C-qGSw-c 4183
toil/test/src/retainTempDirTest.py sha256=vmNb2cplGoWgRQn71KcD3HdA2Fxx421SGAky_k9ibgg 4589
toil/test/src/systemTest.py sha256=6qKhsl0k1zegb5v7D92CswSSoDGkQz9Z9nJSVN6UCmw 2271
toil/test/src/threadingTest.py sha256=9umRwuZc2LFE3eT36Yg65XulKl0QzEkk289sn14GPbA 5229
toil/test/src/toilContextManagerTest.py sha256=vM8AgCCghzI5GVginyyhaZZFGZF6xF42-NXl2S0quhY 3114
toil/test/src/userDefinedJobArgTypeTest.py sha256=5PaS_418DbCAk7csGmgx3VC90mB-9Y1X116b9LSLs1w 2869
toil/test/src/workerTest.py sha256=88Mz9ES62IijTkLdnzCxB3ZVEtLS2fxbIVlfhjI4SwI 6334
toil/test/utils/__init__.py sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k 612
toil/test/utils/toilDebugTest.py sha256=FlS8_0jKF5d-Y_g4RucRWQDJtUUM6nsjNCrjxVgqjRQ 9096
toil/test/utils/toilKillTest.py sha256=qMYnMjeqZGxXan8k0ITaK7D80YYVmfdplFDV0LIJ0t4 3494
toil/test/utils/utilsTest.py sha256=cHDWs_KOud1nIEQ13M5GNV_SE4rOPAtoCb43MbZD9l8 19513
toil/test/wdl/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/test/wdl/wdltoil_test.py sha256=yHLJGkEEet-aLrcAcs15iVvvWxuE4NUYs-v78DKIXqg 40105
toil/test/wdl/wdltoil_test_kubernetes.py sha256=a45TojDEwksW7MYk1F0KzQdgXJRktQYOsq36CfpBvuo 2818
toil/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/utils/toilClean.py sha256=X6Fws6LVqa-ScUITMTomV5iohXa3yz_rAIFnUfXlqZU 1850
toil/utils/toilConfig.py sha256=Ki6gGV-9d21z06u-A0meE2H0MjJUCT4mQEsMmERHn8o 1502
toil/utils/toilDebugFile.py sha256=HdBOe6IX6xyzGjDf_ZDxCTWaeA9lFO94UexGV1oeptE 6302
toil/utils/toilDebugJob.py sha256=K3j5wqDBzLHRGwThE_PDVN0-yKFl7xETDWXrNe6EnQc 10796
toil/utils/toilDestroyCluster.py sha256=OvwlKgomHiLptN8GjLouBzfFCo-SyLfrRWF4sv0kPww 1416
toil/utils/toilKill.py sha256=21zOstvFb32cwQlhMsG5Q4lPT2CSnZ7OXEK1mmyLmtk 2751
toil/utils/toilLaunchCluster.py sha256=nKoqmbAnadoZNKx7plzyZzAgMj6yn38tu2LOQqjLNUU 12931
toil/utils/toilMain.py sha256=Lz7dtkpE8urTRgimRjewKvbh4Xgh6l0OJRtxX203LyI 2790
toil/utils/toilRsyncCluster.py sha256=cR-4o9KpoyBdObCwQgpAqpO30VK3gGzwHKOGyQHGQeQ 2150
toil/utils/toilServer.py sha256=4XbyOHQHgMWWrCWj9Uz1M-jLQheV2Ju-DQ_fNdnBg1o 1178
toil/utils/toilSshCluster.py sha256=QSz2w1vJfiBVicz3ooLqNJM_BRKrF3N6mxWdbmF9Pbo 2840
toil/utils/toilStats.py sha256=I8ERYFA0NxYDC8meBoMkxABmVfTlvYWnOBRP8BfVGEc 25615
toil/utils/toilStatus.py sha256=qacxW5lcguvmhUi1b4cjm1acJik0zpsP7CsUuZyX-fo 20424
toil/utils/toilUpdateEC2Instances.py sha256=dreH9Vc2qUoc0he5AwqiFmqdOQp3tMmIfkjWm7GS5qE 1295
toil/wdl/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
toil/wdl/utils.py sha256=U0TqbVTsap0VdeZjrUf4l71A7Zns-Hkso1B1Zdp2LRk 1316
toil/wdl/wdltoil.py sha256=WQY6bJKErqjfLnXVahe8dJmDyW75qdtiwmTuH5_qRtM 239255
toil-8.0.0.dist-info/LICENSE sha256=YVxVi652J1ZDmtC3EMP5r0EbK85-hm_pzogiULmlqUA 12862
toil-8.0.0.dist-info/METADATA sha256=B3SObwKGhQzZW2p92CSPbw8dmSWFQP4M45MKedRkl4I 8305
toil-8.0.0.dist-info/WHEEL sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8 91
toil-8.0.0.dist-info/entry_points.txt sha256=EF2yFhV2UYuJGr-OjMkUOd3RyOCgRWQbS6XJtBJ25eM 436
toil-8.0.0.dist-info/top_level.txt sha256=1ydj7IXvHS9tMT5OVTSSpub6ZOaQeIn3KGCgJqaikF0 5
toil-8.0.0.dist-info/RECORD

top_level.txt

toil

entry_points.txt

_toil_contained_executor = toil.batchSystems.contained_executor:executor
_toil_mesos_executor = toil.batchSystems.mesos.executor:main [mesos]
_toil_worker = toil.worker:main
cwltoil = toil.cwl.cwltoil:cwltoil_was_removed [cwl]
toil = toil.utils.toilMain:main
toil-cwl-runner = toil.cwl.cwltoil:main [cwl]
toil-wdl-runner = toil.wdl.wdltoil:main [wdl]
toil-wes-cwl-runner = toil.server.cli.wes_cwl_runner:main [server]