Path |
Digest |
Size |
taxpasta/__init__.py |
sha256=FQqUF9aPgiT8bauTJYSaRKDtYZpz_7o7HpV5isfn_io
|
1128 |
taxpasta/__main__.py |
sha256=vKVbG_F_1BEQLUjoncwHaaWvHK05JhNGqjZXZiBkt90
|
844 |
taxpasta/_version.py |
sha256=akvr8ObxvMF-aaLBzW41juT4_KL3BjQUrjbwkIuQXMk
|
411 |
taxpasta/py.typed |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
taxpasta/application/__init__.py |
sha256=oozDzlGUcCIpKv8xgEw9iD_syv_KrC1t565bxVbztGA
|
876 |
taxpasta/application/add_tax_info_command.py |
sha256=7nujmzUQ-owPbRhwWHJaDoz07yL-IdWVzRY3re5-nX8
|
3887 |
taxpasta/application/consensus_application.py |
sha256=C-mnoYwbqX3jNvbCAe2L2hRLAtk1Rj6rLfTKeOG00tA
|
1620 |
taxpasta/application/sample_handling_application.py |
sha256=HC_fg0JJ8c4WCgIpE21fnsucmr4wKYynLP3LwkIrgzM
|
5115 |
taxpasta/application/error/__init__.py |
sha256=2JxlCYk7hpq3XKN8WCLIQqgb39TTIVek7w1cUUX3Fko
|
799 |
taxpasta/application/error/standardisation_error.py |
sha256=vbuR1WWkX_indTdQqbtU3JQ-bDE5-vcGrroRmkkHCsw
|
1260 |
taxpasta/application/error/taxpasta_error.py |
sha256=wVNzOToinMsEYBfZORxs6gYjLDIZoaJcLiTYdr3VjHM
|
995 |
taxpasta/application/service/__init__.py |
sha256=T6g8JhsW_Y_UOqo3c-m_uJ1-sAtTa1OmD3RAVmHkci8
|
1126 |
taxpasta/application/service/_types.py |
sha256=ddyKLfbxXcZxWOsO_lOOnfpqp3hsEpCk1Y2Dp_e4QF0
|
990 |
taxpasta/application/service/profile_reader.py |
sha256=jy3Ukr75XRns8rAAZDcEVFnRi0fWhInY4iv5HSTrOeg
|
1654 |
taxpasta/application/service/profile_standardisation_service.py |
sha256=0yslSb6OoYJxDWJakYG8SW4UsCe0wLXAi_OTHCBh6LE
|
1357 |
taxpasta/application/service/standard_profile_writer.py |
sha256=emr1z3h8JqyHOTf57CxeQGmZ9OWojIxy3o6MfFW9zCY
|
1258 |
taxpasta/application/service/table_reader.py |
sha256=t7FJhy50r12pE7QEm5NQ83ZUbDQrms5ZwIw1HMeE64E
|
1100 |
taxpasta/application/service/tidy_observation_table_writer.py |
sha256=r53jLqGWtMc0MI20sTtGNLgD0EQz9R1MAnnUr-JzDy0
|
1293 |
taxpasta/application/service/wide_observation_table_writer.py |
sha256=aUvkNdT5bPxhu6H7RSkRp4YtQc1dv-WNcWhrMCgMAHQ
|
1285 |
taxpasta/domain/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/domain/model/__init__.py |
sha256=QShsyebHj4wSKcI0UnsYTSa9nJKuBOBBzfmeIQLp9-w
|
888 |
taxpasta/domain/model/sample.py |
sha256=Ss-aH7bd0bvtlAl2bO89JChbw4QopUhGln1KDwJaPuk
|
990 |
taxpasta/domain/model/standard_profile.py |
sha256=2nYePVBRkc2jRacCCOpZlzo41PAV50tgl5sZaHS5oiA
|
1156 |
taxpasta/domain/model/tidy_observation_table.py |
sha256=MX4_KJWKkm-rsiUWf6lmAKMZ6clI0ODRwxCbz-Qx9cE
|
1585 |
taxpasta/domain/model/wide_observation_table.py |
sha256=zobYDWPcGe4UhbdKJAT4MjQ12kVPAxfUKWCtGoPd54g
|
1707 |
taxpasta/domain/service/__init__.py |
sha256=7y5YvN1_Z3Ewm9ariOVz7L2_u5zpMyscAD8wP5Xks5s
|
865 |
taxpasta/domain/service/consensus_builder.py |
sha256=OSmUWyTXla6Flmnm8t3jzLHWqg5aOYawdTBQ1dhtPd4
|
1247 |
taxpasta/domain/service/sample_merging_service.py |
sha256=PFB-R_TrFvohfJrz05tdGJy4m9sgv_ma8IRhYnJDEvw
|
4067 |
taxpasta/domain/service/taxonomy_service.py |
sha256=siUfNGJlnGcTQ1BUJ3xfa_tdaDp9d5gVasMfWBIFIPw
|
3481 |
taxpasta/infrastructure/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/infrastructure/application/__init__.py |
sha256=kDatZqx6rJGIyJUBdP0p89enxs-ejaK_B4D4I9emSmw
|
2380 |
taxpasta/infrastructure/application/_dependency_check_mixin.py |
sha256=Gm9uNrc8lkD4lCyxr2meo9FbFCV3w_PPYxELGgddXkw
|
4592 |
taxpasta/infrastructure/application/application_service_registry.py |
sha256=g7t_M3im2G55HNqxLXzRFebLJyKOUmKDGGXPvBBsj8g
|
12844 |
taxpasta/infrastructure/application/sample_sheet.py |
sha256=BnQ_UECvYzvv_2WmtLEPnHQC6ECDrmpYq7TeJSxCYd8
|
1785 |
taxpasta/infrastructure/application/standard_profile_file_format.py |
sha256=Wv_9bBUtPrt4i923tudcpoPA6B1FayMgifs63c_a440
|
1105 |
taxpasta/infrastructure/application/supported_profiler.py |
sha256=7lWs9C_s9XOxv7TRl153k51TAj8aBYTbvFlzuibP6BQ
|
1151 |
taxpasta/infrastructure/application/table_reader_file_format.py |
sha256=xdDvLcjffhjxjajFB9b1FijCtvkrEeWOHCOPW-OGsfI
|
1088 |
taxpasta/infrastructure/application/tidy_observation_table_file_format.py |
sha256=1QzyRy-fBVD6tsC2bXox0jDlbopjRYGTFxgqRTl-6bE
|
1097 |
taxpasta/infrastructure/application/wide_observation_table_file_format.py |
sha256=PjJ1rlSIsaL2FeBWK_lRnKLWYFSgAvtBhpXZBLRMojk
|
1119 |
taxpasta/infrastructure/application/bracken/__init__.py |
sha256=i1Q9V0JYw0waGybU_sNSTQ45PtQ7R5zSTv-J7ZDWm90
|
901 |
taxpasta/infrastructure/application/bracken/bracken_profile.py |
sha256=xOMKk2_-k3x2WbB9wdCqQ3CYRqhoBPBFJU81HcnyVX0
|
2273 |
taxpasta/infrastructure/application/bracken/bracken_profile_reader.py |
sha256=W68v-LEwHSKCgF5vqBCttQ4HmxUaPdbe_stuwJdh6KA
|
1750 |
taxpasta/infrastructure/application/bracken/bracken_profile_standardisation_service.py |
sha256=Jh4YNpAeYZp9U4CecxD3LAxrQSpJ5YDAhhzVVIb_SrM
|
2096 |
taxpasta/infrastructure/application/centrifuge/__init__.py |
sha256=6fwtHnP499rJwwhut0HFFO7DEouxC33kItOPQusc9S0
|
919 |
taxpasta/infrastructure/application/centrifuge/centrifuge_profile.py |
sha256=bCyOW18waIV1gRYT54P-cJln0D626aRDNsKbR7kpQms
|
1812 |
taxpasta/infrastructure/application/centrifuge/centrifuge_profile_reader.py |
sha256=JpIgEXTgyLdMIoe7Sed-w0EOgM2W-sN18YlzvRcm5h8
|
2111 |
taxpasta/infrastructure/application/centrifuge/centrifuge_profile_standardisation_service.py |
sha256=nztvLAjMLkEFGTjO1COe6DiMVwrXJTZcxZOBgSkAfBU
|
1992 |
taxpasta/infrastructure/application/diamond/__init__.py |
sha256=tLV3v7BuhQcFvyNYLQE_sjzj8jQ_jWI9yXXf6zQCAt4
|
901 |
taxpasta/infrastructure/application/diamond/diamond_profile.py |
sha256=c9Fsa6JPgRT_pOGHhgQq47uG-4iyQQAKMIIcpAhmMGI
|
1119 |
taxpasta/infrastructure/application/diamond/diamond_profile_reader.py |
sha256=sWtDRxOQ0_dMPvotcnJmAfOSpGA-CY2VBFbn7XUQSFU
|
1677 |
taxpasta/infrastructure/application/diamond/diamond_profile_standardisation_service.py |
sha256=OJRyEoRVqJ_z-vF5OOGMv-KiPrZ0950Ktn1WCSP5XQ4
|
1960 |
taxpasta/infrastructure/application/ganon/__init__.py |
sha256=GK4pGa_wpCCLoix_XnJ-OSNrlVuyHbVuuTrNR9bGDCs
|
889 |
taxpasta/infrastructure/application/ganon/ganon_profile.py |
sha256=uhH7hpMaD5DYodcrLm2MQrtUFqXlL9KTJT1brjMxR0M
|
2132 |
taxpasta/infrastructure/application/ganon/ganon_profile_reader.py |
sha256=s6yfhHSD7l0oSpbxNx16exkRIBzW0a9soszGgNul-Ok
|
2132 |
taxpasta/infrastructure/application/ganon/ganon_profile_standardisation_service.py |
sha256=_qU_yefnx1oQA8SMyy_hoKpJwgCLRJ4DO90DZE2WzkQ
|
3057 |
taxpasta/infrastructure/application/kaiju/__init__.py |
sha256=shJe2WfvPF5o3tY0bfnNYNfifDY0R-LxeFI0WIN-6Mk
|
889 |
taxpasta/infrastructure/application/kaiju/kaiju_profile.py |
sha256=cwTGzNpBt3hGSxMO7PkrIWTO8azTxU1sE5jqT_bmpeU
|
1924 |
taxpasta/infrastructure/application/kaiju/kaiju_profile_reader.py |
sha256=St6lZ4PV-zF09hUpPGaV4xhvpLgwGT3VdHz6J10zCaU
|
1769 |
taxpasta/infrastructure/application/kaiju/kaiju_profile_standardisation_service.py |
sha256=CWWQsSC7UKsm1dz8X1urlqcx4_6OeatK1FGmzMlNn2c
|
2672 |
taxpasta/infrastructure/application/kmcp/__init__.py |
sha256=7SgHRHipy79gz1pMGCnJrKX57JPGYJkbqWzhf-EAH8c
|
883 |
taxpasta/infrastructure/application/kmcp/kmcp_profile.py |
sha256=A9kQhBTxuh86nRS2G_ELoPcevBC4Ir-ZW9K8Z-hD18Y
|
2641 |
taxpasta/infrastructure/application/kmcp/kmcp_profile_reader.py |
sha256=BKbR7ktKzrihEGYo_caur_F0fWvHPDxBMnIuXFlxk94
|
1798 |
taxpasta/infrastructure/application/kmcp/kmcp_profile_standardisation_service.py |
sha256=vNfawZUyqIUK1KrLLA4_JNSlAZL-B22SbaHA1z2iY-I
|
2711 |
taxpasta/infrastructure/application/kraken2/__init__.py |
sha256=REwZSOu2xA0NNAxs0UlxM2vQnz78NY1f61Xs_Faoj38
|
901 |
taxpasta/infrastructure/application/kraken2/kraken2_profile.py |
sha256=VDeJZDlkQOfx5805a2t7Ac5TTGEIBFteF_r1aicZUW0
|
2244 |
taxpasta/infrastructure/application/kraken2/kraken2_profile_reader.py |
sha256=H8DL2OOTVbmLQciYmHVlB62gjHmjs1FLV8S94RunDoA
|
2841 |
taxpasta/infrastructure/application/kraken2/kraken2_profile_standardisation_service.py |
sha256=kcqHnuMKdcwAabbvNNBcyI3VmoNKBpibvViu5ic8Cg0
|
1871 |
taxpasta/infrastructure/application/krakenuniq/__init__.py |
sha256=DY3pHoqK4HX0rWwOgW_0s8bSMvprsw4At6IkDPiAevQ
|
919 |
taxpasta/infrastructure/application/krakenuniq/krakenuniq_profile.py |
sha256=hvbVeZdP-6kHmCHdg1zjFn_ch8BRCWwZbUMcOttr_yw
|
1480 |
taxpasta/infrastructure/application/krakenuniq/krakenuniq_profile_reader.py |
sha256=C7cEHgsMU2PikhMJsMgcN5opB0-uDZMO6-tuspLF9og
|
2015 |
taxpasta/infrastructure/application/krakenuniq/krakenuniq_profile_standardisation_service.py |
sha256=utAOQvzkFqMpV0zyBpkIQcIW_VMPDBCQXgAWbCo30dk
|
1873 |
taxpasta/infrastructure/application/megan6/__init__.py |
sha256=MUZvlVPXv2txseV1kObV8MEQ-xby26LI2GRkWvnu-B8
|
895 |
taxpasta/infrastructure/application/megan6/megan6_profile.py |
sha256=vf_yS1RlfixjoDPtxDiiYzLXeW5mjB8gJ1_SxDHh0Vg
|
1085 |
taxpasta/infrastructure/application/megan6/megan6_profile_reader.py |
sha256=WunrRH8Jmsyr77dDiO3hgBx7MqdFqR-5ESVx8UkdP1U
|
1582 |
taxpasta/infrastructure/application/megan6/megan6_profile_standardisation_service.py |
sha256=4wYKltrA7pWABV1LtVZBqfuFOtWHvfUcYNmJk5fwzQk
|
1831 |
taxpasta/infrastructure/application/metaphlan/__init__.py |
sha256=Z393gcJIpSCiioon8hEft8ExG1xx0hxc0n3NjFxATds
|
913 |
taxpasta/infrastructure/application/metaphlan/metaphlan_profile.py |
sha256=_g2BlAxZGrPuWexv4l8TNPn2Aw56i5Rk0Xadie-nKjI
|
2023 |
taxpasta/infrastructure/application/metaphlan/metaphlan_profile_reader.py |
sha256=NONeeiqzLyNlXIJStEKn2wxkka1WU_VLYMd3RspV7jY
|
3434 |
taxpasta/infrastructure/application/metaphlan/metaphlan_profile_standardisation_service.py |
sha256=otal-f1lRJC9pFpPGuljwDMglAX7eEQQJSha0U_LUb0
|
3671 |
taxpasta/infrastructure/application/motus/__init__.py |
sha256=Br_1bVdiXs-EHBiC_MwUumRjTSN6osKTriK46yhgOwE
|
889 |
taxpasta/infrastructure/application/motus/motus_profile.py |
sha256=kafXpfHyZ221GOud4LwkkOqJSGfAJS3w42_YC3JiqNc
|
1153 |
taxpasta/infrastructure/application/motus/motus_profile_reader.py |
sha256=SNOgfu9GyBsWFTSpJWcdnKlbEXMzbgDGu3nTZqOR6CQ
|
1695 |
taxpasta/infrastructure/application/motus/motus_profile_standardisation_service.py |
sha256=3Rb0xuPY9W6SpEHu3ZzIjheCg4AX2oZchS-iYwm-W4g
|
3367 |
taxpasta/infrastructure/application/standard_profile_writer/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/infrastructure/application/standard_profile_writer/arrow_standard_profile_writer.py |
sha256=XggF83dWBPbApnlhLuFvMY5Dyb92p_jdVarmM_N2S7A
|
1292 |
taxpasta/infrastructure/application/standard_profile_writer/csv_standard_profile_writer.py |
sha256=eek47Vcxybeh5ePbe1pwEXFh2xZnWLlf3sQjbIvEgPc
|
1257 |
taxpasta/infrastructure/application/standard_profile_writer/ods_standard_profile_writer.py |
sha256=VBEAPsBTbceT9Uf8tTAOmuCVzIjGiUc8XR046i-tLH8
|
1311 |
taxpasta/infrastructure/application/standard_profile_writer/parquet_standard_profile_writer.py |
sha256=dgUQFvAe_aV9yxex4243DH7zEhtFDT_hS0q-JO0B6dc
|
1298 |
taxpasta/infrastructure/application/standard_profile_writer/tsv_standard_profile_writer.py |
sha256=uL9u5v_lJKfpZO2EQDaEOCTqpijF8V4sNvOAH0uJ3RQ
|
1268 |
taxpasta/infrastructure/application/standard_profile_writer/xlsx_standard_profile_writer.py |
sha256=UShLfUswIuiiXkZyKdegf_xRWsxlM95ak5zTjrcN9AY
|
1319 |
taxpasta/infrastructure/application/table_reader/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/infrastructure/application/table_reader/arrow_table_reader.py |
sha256=qNs2Ygq65VJp5z6WXH5kZWDnB3lmNS15sPS6GWEAC-Y
|
1098 |
taxpasta/infrastructure/application/table_reader/csv_table_reader.py |
sha256=QmYXA31PC7He5V6WsXvLUXscXjNMLHaNnheQFhclFoM
|
1073 |
taxpasta/infrastructure/application/table_reader/ods_table_reader.py |
sha256=HXDDUCGAZu8zs-jzqRAo4xw4hprOVAqRZEibSAQ4raQ
|
1102 |
taxpasta/infrastructure/application/table_reader/parquet_table_reader.py |
sha256=y1BwZFFZOmJJkO2pkFj1t2sIl02HqG4b3ygOApQfLdA
|
1106 |
taxpasta/infrastructure/application/table_reader/tsv_table_reader.py |
sha256=hLzs2vOxP70GqopGQNDFvhkruGdEKKVlMHJKpITVCak
|
1085 |
taxpasta/infrastructure/application/table_reader/xlsx_table_reader.py |
sha256=NDFWHcpcaP2xZP9Bqrw1IhlTg5q6Y5DAk1veqZDpNyU
|
1111 |
taxpasta/infrastructure/application/tidy_observation_table_writer/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/infrastructure/application/tidy_observation_table_writer/arrow_table_writer.py |
sha256=ehKwzQX0XUEOXfsSkxRKAlKQqsWKYEMLaD3J71cptEA
|
1311 |
taxpasta/infrastructure/application/tidy_observation_table_writer/csv_table_writer.py |
sha256=bvTxt8Py3fd0UFtI9rVYCbnR64k0RHnKAv2XO7S-wWA
|
1263 |
taxpasta/infrastructure/application/tidy_observation_table_writer/ods_table_writer.py |
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1330 |
taxpasta/infrastructure/application/tidy_observation_table_writer/parquet_table_writer.py |
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1317 |
taxpasta/infrastructure/application/tidy_observation_table_writer/tsv_table_writer.py |
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1274 |
taxpasta/infrastructure/application/tidy_observation_table_writer/xlsx_table_writer.py |
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|
1338 |
taxpasta/infrastructure/application/wide_observation_table_writer/__init__.py |
sha256=hkuUFm0ijV5MEX7WhClXAO2f-p3IXMV77Ju5ox5FWw8
|
699 |
taxpasta/infrastructure/application/wide_observation_table_writer/arrow_wide_observation_table_writer.py |
sha256=KfNrkdCCIx_nUiWOkZRu_FS1FPKh5uUKSDk50BMtlD0
|
1313 |
taxpasta/infrastructure/application/wide_observation_table_writer/biom_wide_observation_table_writer.py |
sha256=C6uARQ_noifnR76Mnk1oY9v7alP_LKjSvWSBa4dROdM
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2507 |
taxpasta/infrastructure/application/wide_observation_table_writer/csv_wide_observation_table_writer.py |
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|
1265 |
taxpasta/infrastructure/application/wide_observation_table_writer/ods_wide_observation_table_writer.py |
sha256=E_0dPWB-B5ctnTzEraq4yEuynblnW0hjUf4Z3u-o5wQ
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1332 |
taxpasta/infrastructure/application/wide_observation_table_writer/parquet_wide_observation_table_writer.py |
sha256=ePPVZ6t4gnRyURMWYcl6aFNjxm7_4Ul3RKqNDXx1vvc
|
1319 |
taxpasta/infrastructure/application/wide_observation_table_writer/tsv_wide_observation_table_writer.py |
sha256=bP4rx9jW3QmA_OOFFX0i13kHHGZZtzijLffDuD6Gdcs
|
1276 |
taxpasta/infrastructure/application/wide_observation_table_writer/xlsx_wide_observation_table_writer.py |
sha256=cAz0QwEMapy46R8sCuz4nRfzRkHB1-Iz1TPocT_S1N8
|
1340 |
taxpasta/infrastructure/cli/__init__.py |
sha256=7gUA4ZeJvfbnYrCW01q8wy2iBKQ6wQ4UTMg-N3Ybn7k
|
773 |
taxpasta/infrastructure/cli/merge.py |
sha256=6QIGX5x0FywG7t6u6bseaJF_jLwRvDwe0fvPxhfPIwo
|
16966 |
taxpasta/infrastructure/cli/standardise.py |
sha256=76JXiJDfsTVKpb3SDSrKEadc-eIAbnW6z0kQrY98tKg
|
8374 |
taxpasta/infrastructure/cli/taxpasta.py |
sha256=eKMwHg4zcQqt52EClGfpMkCL_JAZSZlJWquoi3Y4kUA
|
2582 |
taxpasta/infrastructure/domain/__init__.py |
sha256=pNcRnQZogWhIqAqQZm4YJAG24J_yQWclc8AjVd2VWCc
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771 |
taxpasta/infrastructure/domain/service/__init__.py |
sha256=YcXSptfqxQWlgtj-obZ9NSacxyAXyz7hVmdALUAIcMY
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760 |
taxpasta/infrastructure/domain/service/taxopy_taxonomy_service.py |
sha256=Uxdjfje73J_D3V2xM1Mn3OQrtujI11UGNxMAc547fy8
|
10063 |
taxpasta/infrastructure/helpers/__init__.py |
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834 |
taxpasta/infrastructure/helpers/base_data_frame_model.py |
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1258 |
taxpasta/infrastructure/helpers/decorators.py |
sha256=-_Xx2b5ctnV9k5NexGoYkCqY0M5VIbvIFAcC7tsp3H8
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1588 |
taxpasta-0.7.0.dist-info/METADATA |
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taxpasta-0.7.0.dist-info/WHEEL |
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taxpasta-0.7.0.dist-info/entry_points.txt |
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taxpasta-0.7.0.dist-info/licenses/LICENSE |
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taxpasta-0.7.0.dist-info/RECORD |
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