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svim

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2.0.0 svim-2.0.0-py3-none-any.whl

Wheel Details

Project: svim
Version: 2.0.0
Filename: svim-2.0.0-py3-none-any.whl
Download: [link]
Size: 81444
MD5: 798bdaa007f4accd3569a8d9ec418695
SHA256: 6a6e5d963055651bb6d89e574e06c405f5a2b2cc88c31a1ea8992a412d5edbe8
Uploaded: 2021-06-18 08:20:43 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: svim
Version: 2.0.0
Summary: A structural variant caller for long reads.
Author: David Heller
Author-Email: heller_d[at]molgen.mpg.de
Home-Page: https://github.com/eldariont/svim
License: GPLv3
Keywords: svim SV PacBio structural variation caller
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3.6
Requires-Dist: pysam (>=0.15.2)
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: matplotlib (>=3.3.0)
Requires-Dist: edlib
Requires-Dist: pyspoa (>=0.0.6)
Requires-Dist: py-cpuinfo (>=7.0.0)
[Description omitted; length: 6927 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.36.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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svim/SVIM.py sha256=7mVT6Pi6RnNazF6TTy_e2rv_ploSYJfgFOf6HZbYUFM 13310
svim/SVIM_CLUSTER.py sha256=hUI1i4z-EsYrlBPcHKMTnOHlz9_BFzYsbpVLwcia86o 6634
svim/SVIM_COLLECT.py sha256=UdHn78UNRFgdhMQSP8w5R0SGHrqHR1FMXtbnuzSepWg 7154
svim/SVIM_COMBINE.py sha256=6MMOCI1V-MgCtjrdwzMuAmK39hmP0JhpLDPWgPnFmJE 31207
svim/SVIM_alignment.py sha256=0pRvV44clZl3og-LLtzDlHvxbArjvWNt_TLBnYDRTMY 3322
svim/SVIM_clustering.py sha256=5-bJb-IlNLC6OqVw40_C9ZuMVN27Gf__ttCvxBeCtTE 23977
svim/SVIM_fullread.py sha256=0VPIJBoyNheAaN6WQBU97IqozcqSZiiasldt31m2sg8 2750
svim/SVIM_genotyping.py sha256=LWzXSZkIM9C8RPQZzKk9CrHIDw3iKEZ6daa7oBuI-wM 4809
svim/SVIM_input_parsing.py sha256=NvzUhlT9HDq-LYz7_xoTk-0k2itdo7yWWmedFvOR1Xc 44861
svim/SVIM_inter.py sha256=G8dUDlpz90ihHQ0JteUfJCadzOiHE9Qx3s3x5rIJFRE 23351
svim/SVIM_intra.py sha256=9is_KQOjFFR62UqyRih-IWtwEC8dh871Ub312k6qMFE 2341
svim/SVIM_merging.py sha256=vwhX15kRlKBDTBVvEISXZzVDjEVtwplmj8Nh7vqx7sY 10472
svim/SVIM_plot.py sha256=5KyFuNQJ86CEnV2oy2DtRp8ZwTPyY1lsrVDInYJ6n8M 6497
svim/SVIM_splitread.py sha256=I0pG83Wrde7EhzR6EDHAHwdvhdyF2hapbAdMr8wPAG0 17267
svim/SVSignature.py sha256=eAwv2NQ-_42eDPPISo_aq1mf5E7cSKimd6Y3lZ-btVc 13231
svim/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
svim-2.0.0.data/data/LICENSE sha256=CuBIWlvTemPmNgNZZBfk6w5lMzT6bH-TLKOg6F1K8ic 35148
svim-2.0.0.data/scripts/svim sha256=cEBT8cR9UsBDscSDNGl6chxnXRBWKzcd5jEc8oJRu_U 12165
tests/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/test_Collect.py sha256=SeHpLzpEZWRrWGt9nhnBhOcxP01KbRwwtTwZlNB0DIU 13988
tests/test_SVCandidate.py sha256=yyIafgul7uKZBSxoNebsi1QU0JA0TR_OKCVC2gIJQto 5390
tests/test_Signature.py sha256=_6qH-M1917fGk5LhF6uko-o31RIEtN2rYUXM6W14AOE 1482
tests/test_clustering.py sha256=Zb-LkhBp6yLI3hQwtHuzNtkWzy-Z1cpOaVDbnDifH24 2865
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tests/test_input_parsing.py sha256=K4f0oVjnL9RYvyevlgpgSXpqO8mAF8oh6BNjsTpx3-s 1229
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tests/test_intra.py sha256=r1wb3kExgQ6mmLB9DsHewIP6tH1ldJTAz9ZHg-nm1SM 994
tests/test_satag.py sha256=gQCiPYFfgz5oJ_ZOvRDfDBVxzwTCo6NkYsucvrnM2XY 1826
svim-2.0.0.dist-info/LICENSE sha256=CuBIWlvTemPmNgNZZBfk6w5lMzT6bH-TLKOg6F1K8ic 35148
svim-2.0.0.dist-info/METADATA sha256=g0YRxCszmHiwUsuMxDr0TCBGe8YUKzxkRtfalxw8GIU 7735
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svim-2.0.0.dist-info/top_level.txt sha256=PKCSzx5P7uZ6ApLfk-OEYP-47XJNcAx0p5VXtgQtWnU 11
svim-2.0.0.dist-info/RECORD — —

top_level.txt

svim
tests