stars-omics

View on PyPIReverse Dependencies (0)

0.1.0 stars_omics-0.1.0-py3-none-any.whl

Wheel Details

Project: stars-omics
Version: 0.1.0
Filename: stars_omics-0.1.0-py3-none-any.whl
Download: [link]
Size: 4889
MD5: 0d88efaa2a603515a4af9a48944b0d4b
SHA256: c7e161b8c97194bffe78215e74e84f2a8e131e799e87cb7b31e1e51b1f6680a1
Uploaded: 2025-01-04 23:50:34 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: stars_omics
Version: 0.1.0
Summary: A spatial transcriptomics analysis tool.
Author: Chongyue Zhao
Author-Email: zhaocy.research[at]gmail.com
Home-Page: https://github.com/Zhaocy-Research/STARS/tree/main
License: MIT
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Requires-Dist: absl-py (>=2.0.0)
Requires-Dist: aiobotocore (>=2.5.4)
Requires-Dist: aiohttp (>=3.8.5)
Requires-Dist: aioitertools (>=0.11.0)
Requires-Dist: aiosignal (>=1.3.1)
Requires-Dist: anndata (>=0.9.2)
Requires-Dist: annotated-types (>=0.5.0)
Requires-Dist: anyio (>=3.7.1)
Requires-Dist: arrow (>=1.2.3)
Requires-Dist: asciitree (>=0.3.3)
Requires-Dist: astunparse (>=1.6.3)
Requires-Dist: async-timeout (>=4.0.3)
Requires-Dist: attrs (>=23.1.0)
Requires-Dist: axial-positional-embedding (>=0.2.1)
Requires-Dist: backoff (>=2.2.1)
Requires-Dist: beautifulsoup4 (>=4.12.2)
Requires-Dist: biomart (>=0.9.2)
Requires-Dist: blessed (>=1.20.0)
Requires-Dist: botocore (>=1.31.17)
Requires-Dist: cell2location (>=0.1.3)
Requires-Dist: chex (>=0.1.7)
Requires-Dist: click (>=8.1.7)
Requires-Dist: click-plugins (>=1.1.1)
Requires-Dist: cligj (>=0.7.2)
Requires-Dist: cloudpickle (>=2.2.1)
Requires-Dist: colorcet (>=3.0.1)
Requires-Dist: contextlib2 (>=21.6.0)
Requires-Dist: cramjam (>=2.8.3)
Requires-Dist: croniter (>=1.4.1)
Requires-Dist: cryptography (>=41.0.7)
Requires-Dist: csbdeep (>=0.8.0)
Requires-Dist: dask (>=2023.9.2)
Requires-Dist: dask-image (>=2023.8.1)
Requires-Dist: datashader (>=0.15.2)
Requires-Dist: datashape (>=0.5.2)
Requires-Dist: dateutils (>=0.6.12)
Requires-Dist: deepdiff (>=6.5.0)
Requires-Dist: distributed (>=2023.9.2)
Requires-Dist: dm-tree (>=0.1.8)
Requires-Dist: docrep (>=0.3.2)
Requires-Dist: docutils (>=0.20.1)
Requires-Dist: einops (>=0.6.1)
Requires-Dist: entrypoints (>=0.4)
Requires-Dist: etils (>=1.5.0)
Requires-Dist: exceptiongroup (>=1.1.3)
Requires-Dist: fastapi (>=0.103.2)
Requires-Dist: fasteners (>=0.19)
Requires-Dist: fastparquet (>=2024.2.0)
Requires-Dist: filelock (>=3.12.4)
Requires-Dist: fiona (>=1.9.4.post1)
Requires-Dist: flatbuffers (>=24.3.25)
Requires-Dist: flax (>=0.7.4)
Requires-Dist: frozenlist (>=1.4.0)
Requires-Dist: gast (>=0.6.0)
Requires-Dist: geopandas (>=0.14.0)
Requires-Dist: google-pasta (>=0.2.0)
Requires-Dist: grpcio (>=1.64.1)
Requires-Dist: h11 (>=0.14.0)
Requires-Dist: h5py (>=3.9.0)
Requires-Dist: histolab (>=0.6.0)
Requires-Dist: huggingface-hub (>=0.17.3)
Requires-Dist: igraph (>=0.10.8)
Requires-Dist: imagecodecs (>=2024.6.1)
Requires-Dist: imageio (>=2.31.4)
Requires-Dist: importlib-metadata (>=6.8.0)
Requires-Dist: importlib-resources (>=6.1.0)
Requires-Dist: inflect (>=7.0.0)
Requires-Dist: inquirer (>=3.1.3)
Requires-Dist: itsdangerous (>=2.1.2)
Requires-Dist: jaraco-classes (>=3.3.0)
Requires-Dist: jax (>=0.4.16)
Requires-Dist: jaxlib (>=0.4.16)
Requires-Dist: jeepney (>=0.8.0)
Requires-Dist: jmespath (>=1.0.1)
Requires-Dist: keras (>=3.4.1)
Requires-Dist: keyring (>=24.3.0)
Requires-Dist: lazy-loader (>=0.3)
Requires-Dist: leidenalg (>=0.10.1)
Requires-Dist: libclang (>=18.1.1)
Requires-Dist: lightning (>=2.0.9.post0)
Requires-Dist: lightning-cloud (>=0.5.39)
Requires-Dist: lightning-utilities (>=0.9.0)
Requires-Dist: lit (>=18.1.8)
Requires-Dist: littleutils (>=0.2.2)
Requires-Dist: llvmlite (>=0.41.0)
Requires-Dist: local-attention (>=1.8.6)
Requires-Dist: locket (>=1.0.0)
Requires-Dist: markdown (>=3.6)
Requires-Dist: markdown-it-py (>=3.0.0)
Requires-Dist: matplotlib-scalebar (>=0.8.1)
Requires-Dist: mdurl (>=0.1.2)
Requires-Dist: memory-profiler (>=0.61.0)
Requires-Dist: metric-learn (>=0.7.0)
Requires-Dist: ml-collections (>=0.1.1)
Requires-Dist: ml-dtypes (>=0.3.1)
Requires-Dist: more-itertools (>=10.1.0)
Requires-Dist: mpmath (>=1.3.0)
Requires-Dist: msgpack (>=1.0.7)
Requires-Dist: mudata (>=0.2.3)
Requires-Dist: multidict (>=6.0.4)
Requires-Dist: multipledispatch (>=1.0.0)
Requires-Dist: multiscale-spatial-image (>=0.11.2)
Requires-Dist: namex (>=0.0.8)
Requires-Dist: natsort (>=8.4.0)
Requires-Dist: nest-asyncio (>=1.5.8)
Requires-Dist: nh3 (>=0.2.15)
Requires-Dist: numba (>=0.58.0)
Requires-Dist: numcodecs (>=0.11.0)
Requires-Dist: numpy (>=1.26.4)
Requires-Dist: numpyro (>=0.13.2)
Requires-Dist: nvidia-cublas-cu12 (>=12.1.3.1)
Requires-Dist: nvidia-cuda-cupti-cu12 (>=12.1.105)
Requires-Dist: nvidia-cuda-nvrtc-cu12 (>=12.1.105)
Requires-Dist: nvidia-cuda-runtime-cu12 (>=12.1.105)
Requires-Dist: nvidia-cudnn-cu12 (>=8.9.2.26)
Requires-Dist: nvidia-cufft-cu12 (>=11.0.2.54)
Requires-Dist: nvidia-curand-cu11 (>=10.2.10.91)
Requires-Dist: nvidia-curand-cu12 (>=10.3.2.106)
Requires-Dist: nvidia-cusolver-cu12 (>=11.4.5.107)
Requires-Dist: nvidia-cusparse-cu11 (>=11.7.4.91)
Requires-Dist: nvidia-cusparse-cu12 (>=12.1.0.106)
Requires-Dist: nvidia-nccl-cu11 (>=2.14.3)
Requires-Dist: nvidia-nccl-cu12 (>=2.20.5)
Requires-Dist: nvidia-nvjitlink-cu12 (>=12.4.127)
Requires-Dist: nvidia-nvtx-cu11 (>=11.7.91)
Requires-Dist: nvidia-nvtx-cu12 (>=12.1.105)
Requires-Dist: ogb (>=1.3.6)
Requires-Dist: ome-zarr (>=0.8.1)
Requires-Dist: omnipath (>=1.0.7)
Requires-Dist: opencv-python (>=4.8.1.78)
Requires-Dist: openslide-python (>=1.2.0)
Requires-Dist: opt-einsum (>=3.3.0)
Requires-Dist: optax (>=0.1.7)
Requires-Dist: optree (>=0.11.0)
Requires-Dist: orbax-checkpoint (>=0.4.1)
Requires-Dist: ordered-set (>=4.1.0)
Requires-Dist: outdated (>=0.2.2)
Requires-Dist: param (>=1.13.0)
Requires-Dist: partd (>=1.4.1)
Requires-Dist: patsy (>=0.5.3)
Requires-Dist: performer-pytorch (>=1.1.4)
Requires-Dist: pims (>=0.6.1)
Requires-Dist: pip (>=24.0)
Requires-Dist: pkginfo (>=1.9.6)
Requires-Dist: pluggy (>=1.5.0)
Requires-Dist: protobuf (>=4.24.3)
Requires-Dist: pyarrow (>=13.0.0)
Requires-Dist: pyct (>=0.5.0)
Requires-Dist: pydantic (>=1.10.13)
Requires-Dist: pydantic-core (>=2.4.0)
Requires-Dist: pygeos (>=0.14)
Requires-Dist: pygments (>=2.16.1)
Requires-Dist: pyjwt (>=2.8.0)
Requires-Dist: pynndescent (>=0.5.10)
Requires-Dist: pyproj (>=3.6.1)
Requires-Dist: pyro-api (>=0.1.2)
Requires-Dist: pyro-ppl (>=1.8.6)
Requires-Dist: python-editor (>=1.0.4)
Requires-Dist: python-multipart (>=0.0.6)
Requires-Dist: pytorch-lightning (>=2.0.9.post0)
Requires-Dist: pywavelets (>=1.4.1)
Requires-Dist: readchar (>=4.0.5)
Requires-Dist: readme-renderer (>=42.0)
Requires-Dist: regex (>=2023.8.8)
Requires-Dist: requests-toolbelt (>=1.0.0)
Requires-Dist: rfc3986 (>=2.0.0)
Requires-Dist: rich (>=13.5.3)
Requires-Dist: s3fs (>=2023.6.0)
Requires-Dist: safetensors (>=0.3.3)
Requires-Dist: scanpy (>=1.9.5)
Requires-Dist: scikit-image (>=0.19.3)
Requires-Dist: scikit-misc (>=0.3.0)
Requires-Dist: scipy (>=1.8.1)
Requires-Dist: scprep (>=1.2.3)
Requires-Dist: scvi-tools (>=1.0.3)
Requires-Dist: seaborn (>=0.12.2)
Requires-Dist: secretstorage (>=3.3.3)
Requires-Dist: segment-anything (>=1.0)
Requires-Dist: session-info (>=1.0.0)
Requires-Dist: shapely (>=2.0.1)
Requires-Dist: slicerator (>=1.1.0)
Requires-Dist: sniffio (>=1.3.0)
Requires-Dist: sortedcontainers (>=2.4.0)
Requires-Dist: soupsieve (>=2.5)
Requires-Dist: sparse (>=0.14.0)
Requires-Dist: sparsemax (>=0.1.9)
Requires-Dist: spatial-image (>=0.3.0)
Requires-Dist: spatialdata (>=0.0.12)
Requires-Dist: squidpy (>=1.3.0)
Requires-Dist: stardist (>=0.9.1)
Requires-Dist: starlette (>=0.27.0)
Requires-Dist: starsessions (>=1.3.0)
Requires-Dist: statsmodels (>=0.14.0)
Requires-Dist: stdlib-list (>=0.9.0)
Requires-Dist: sympy (>=1.12)
Requires-Dist: tbb (>=2021.10.0)
Requires-Dist: tblib (>=2.0.0)
Requires-Dist: tensorboard (>=2.16.2)
Requires-Dist: tensorboard-data-server (>=0.7.2)
Requires-Dist: tensorflow-io-gcs-filesystem (>=0.37.1)
Requires-Dist: tensorstore (>=0.1.44)
Requires-Dist: termcolor (>=2.4.0)
Requires-Dist: texttable (>=1.6.7)
Requires-Dist: tifffile (>=2023.9.26)
Requires-Dist: timm (>=0.9.8)
Requires-Dist: tokenizers (>=0.13.3)
Requires-Dist: tomli (>=2.0.1)
Requires-Dist: toolz (>=0.12.0)
Requires-Dist: torch (==2.1.0+cu118)
Requires-Dist: torch-cluster (==1.6.3+pt21cu118)
Requires-Dist: torch-geometric (>=2.5.3)
Requires-Dist: torch-scatter (==2.1.2+pt21cu118)
Requires-Dist: torch-sparse (==0.6.18+pt21cu118)
Requires-Dist: torch-spline-conv (==1.2.2+pt21cu118)
Requires-Dist: torchaudio (==2.1.0+cu118)
Requires-Dist: torchmetrics (>=1.2.0)
Requires-Dist: torchvision (==0.16.0+cu118)
Requires-Dist: traitlets (>=5.10.1)
Requires-Dist: transformers (>=4.33.3)
Requires-Dist: triton (>=2.1.0)
Requires-Dist: twine (>=4.0.2)
Requires-Dist: typing-extensions (>=4.11.0)
Requires-Dist: umap-learn (>=0.5.4)
Requires-Dist: urllib3 (>=1.26.16)
Requires-Dist: uvicorn (>=0.23.2)
Requires-Dist: validators (>=0.22.0)
Requires-Dist: wcwidth (>=0.2.7)
Requires-Dist: websocket-client (>=1.6.3)
Requires-Dist: websockets (>=11.0.3)
Requires-Dist: werkzeug (>=3.0.3)
Requires-Dist: wrapt (>=1.15.0)
Requires-Dist: xarray (>=2022.12.0)
Requires-Dist: xarray-dataclasses (>=1.6.0)
Requires-Dist: xarray-datatree (>=0.0.12)
Requires-Dist: xarray-schema (>=0.0.3)
Requires-Dist: xarray-spatial (>=0.3.7)
Requires-Dist: yarl (>=1.9.2)
Requires-Dist: zarr (>=2.16.1)
Requires-Dist: zict (>=3.0.0)
Requires-Dist: zipp (>=3.17.0)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 1282 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.6.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
stars_omics-0.1.0.dist-info/LICENSE sha256=ZqPq5L60cgbFuGRXldKWEpkUp8VqAclRxiw9lFrsiu8 1071
stars_omics-0.1.0.dist-info/METADATA sha256=l-NxSz4jFOSF7dMoPBAhpokWX8HXRxDNblU9-iP7eFw 9888
stars_omics-0.1.0.dist-info/WHEEL sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U 91
stars_omics-0.1.0.dist-info/top_level.txt sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs 1
stars_omics-0.1.0.dist-info/RECORD

top_level.txt

[empty]