Reverse Dependencies of spectrum-utils
The following projects have a declared dependency on spectrum-utils:
- casanovo — De novo mass spectrometry peptide sequencing with a transformer model
- cascadia — De novo sequencing for DIA mass spectrometry data
- depthcharge-ms — A mass spectrometry toolkit for deep learning with Transformer models.
- deTELpy — Python package of the deTEL translation error detection pipeline from mass-spectrometry data
- falcon-ms — Large-scale tandem mass spectrum clustering using fast nearest neighbor searching
- fragannot — A python CLI app for fragment annotation
- inspirems — Helping to integrate Spectral Predictors and Rescoring.
- instanovo — De novo sequencing with InstaNovo
- PowerNovo — PowerNovo: A New Efficient Tool for De Novo Peptide Sequencing
- ProteoformQuant — A python command line tool for the quantification of peptidoform/proteoforms
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