Reverse Dependencies of spatialdata

The following projects have a declared dependency on spatialdata:

• cellcharter — A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.
• graphcompass — Spatial metrics for differential analyses of cell organization across conditions
• metaspace-converter — Convert Metaspace datasets to AnnData
• napari-prism — A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays
• napari-spatialdata — Interactive visualization of spatial omics data with napari
• sainsc — Segmentation-free Analysis of In Situ Capture data
• sopa — Spatial-omics pipeline and analysis
• spatialdata-io — SpatialData IO for common techs
• spatialdata-plot — Static plotting for spatial data.
• spatialdata-xenium-explorer — Converting any SpatialData object into files that can be open by the Xenium Explorer
• squidpy — Spatial Single Cell Analysis in Python
• vitessce — Jupyter widget facilitating interactive visualization of spatial single-cell data with Vitessce
• wsidata — no summary