Wheelodex » Projects » spateo-release

spateo-release

View on PyPI — Reverse Dependencies (1)

1.1.0 spateo_release-1.1.0-py3-none-any.whl

Wheel Details

Project: spateo-release
Version: 1.1.0
Filename: spateo_release-1.1.0-py3-none-any.whl
Download: [link]
Size: 741983
MD5: 782ec90b2585fa6ed807740ce490365f
SHA256: 01161a47cf0ad5fe30e69c97351a3b70842b2367d004692fbf3c8b8aea2d2684
Uploaded: 2024-09-18 23:06:17 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: spateo-release
Version: 1.1.0
Summary: Spateo: multidimensional spatiotemporal modeling of single-cell spatial transcriptomics
Author: Xiaojie Qiu
Author-Email: xqiu[at]wi.mit.edu
Home-Page: https://github.com/aristoteleo/spateo-release
License: BSD
Keywords: spatial-transcriptomics,stereo-seq,Visium,seqFish,MERFISH,slide-seq,DBiT-seq,HDST-seq,osmFISH,spatiotemporal
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Image Processing
Requires-Python: >=3.7
Requires-Dist: adjustText
Requires-Dist: anndata (>=0.8.0)
Requires-Dist: colorcet (>=2.0.1)
Requires-Dist: cvxopt (>=1.2.3)
Requires-Dist: csbdeep (>=0.6.3)
Requires-Dist: descartes
Requires-Dist: dynamo-release (>=1.4.1)
Requires-Dist: folium (>=0.12.1)
Requires-Dist: geopandas (>=0.10.2)
Requires-Dist: gpytorch
Requires-Dist: ipywidgets (>=7.7.1)
Requires-Dist: kneed (>=0.7.0)
Requires-Dist: kornia (>=0.6.4)
Requires-Dist: leidenalg (>=0.10.0)
Requires-Dist: loompy (>=3.0.5)
Requires-Dist: mapclassify (>=2.4.2)
Requires-Dist: matplotlib (>=3.7.5)
Requires-Dist: nbconvert
Requires-Dist: networkx (>=2.6.3)
Requires-Dist: numba (>=0.46.0)
Requires-Dist: numpy (>=1.18.1)
Requires-Dist: opencv-python (>=4.5.4.60)
Requires-Dist: pandana
Requires-Dist: pandas (>=0.25.1)
Requires-Dist: paste-bio (>=1.4.0)
Requires-Dist: plotly (>=5.1.0)
Requires-Dist: POT (>=0.8.1)
Requires-Dist: psutil (>=5.6.3)
Requires-Dist: pynndescent (>=0.4.8)
Requires-Dist: pysal (>=1.14.4)
Requires-Dist: pyro-ppl
Requires-Dist: python-igraph (>=0.7.1)
Requires-Dist: pyvista (>=0.39.1)
Requires-Dist: scipy (>=1.0)
Requires-Dist: scikit-image (>=0.18.0)
Requires-Dist: scikit-learn (>=0.19.1)
Requires-Dist: seaborn (>=0.9.0)
Requires-Dist: setuptools (>=58.0.4)
Requires-Dist: Shapely (>=1.8.0)
Requires-Dist: statsmodels (>=0.9.0)
Requires-Dist: tensorflow
Requires-Dist: tqdm (>=4.62.3)
Requires-Dist: torch
Requires-Dist: trame (>=2.2.5)
Requires-Dist: trame-server (>=2.7.0)
Requires-Dist: typing-extensions (>=4.0.1)
Requires-Dist: umap-learn (>=0.5.1)
Requires-Dist: vtk (>=9.2.2)
Requires-Dist: colorcet; extra == "3d"
Requires-Dist: ipygany; extra == "3d"
Requires-Dist: ipyvtklink; extra == "3d"
Requires-Dist: meshio; extra == "3d"
Requires-Dist: open3d (>=0.14.1); extra == "3d"
Requires-Dist: panel; extra == "3d"
Requires-Dist: PVGeo (>=2.1.0); extra == "3d"
Requires-Dist: pyacvd (>=0.2.9); extra == "3d"
Requires-Dist: PyMCubes; extra == "3d"
Requires-Dist: pymeshfix (>=0.15.0); extra == "3d"
Requires-Dist: pythreejs; extra == "3d"
Requires-Dist: black (==22.3.0); extra == "dev"
Requires-Dist: bumpversion (>=0.6.0); extra == "dev"
Requires-Dist: coverage (>=5.1); extra == "dev"
Requires-Dist: cython (>=0.29.10); extra == "dev"
Requires-Dist: isort (==5.10.1); extra == "dev"
Requires-Dist: nose (>=1.3.7); extra == "dev"
Requires-Dist: numpy (>=1.18.1); extra == "dev"
Requires-Dist: pre-commit (>=2.4.0); extra == "dev"
Requires-Dist: setuptools (>=42); extra == "dev"
Requires-Dist: sphinx (>=3.3.1); extra == "dev"
Requires-Dist: sphinx-autoapi (>=1.5.1); extra == "dev"
Requires-Dist: sphinx-rtd-theme (>=0.5.0); extra == "dev"
Requires-Dist: twine (>=2.0.0); extra == "dev"
Requires-Dist: wheel (>=0.34.2); extra == "dev"
Requires-Dist: sphinx-rtd-theme (>=0.3.1); extra == "docs"
Requires-Dist: sphinx (>=2.0.1); extra == "docs"
Requires-Dist: nbsphinx; extra == "docs"
Requires-Dist: sphinx-autodoc-typehints (==1.17.0); extra == "docs"
Requires-Dist: nbsphinx-link; extra == "docs"
Requires-Dist: ipython; extra == "docs"
Requires-Dist: scanpydoc (>=0.4.5); extra == "docs"
Requires-Dist: furo (>=2020.12.30b24); extra == "docs"
Requires-Dist: sphinx-copybutton; extra == "docs"
Requires-Dist: sphinx-gallery (<0.10.1); extra == "docs"
Requires-Dist: sphinx-remove-toctrees; extra == "docs"
Requires-Dist: sphinx-design; extra == "docs"
Requires-Dist: sphinxext-opengraph (==0.8.2); extra == "docs"
Requires-Dist: sphinx-autoapi; extra == "docs"
Requires-Dist: gitpython; extra == "docs"
Requires-Dist: myst-parser; extra == "docs"
Requires-Dist: pandoc; extra == "docs"
Requires-Dist: typing-extensions; python_version < "3.8" and extra == "docs"
Provides-Extra: 3d
Provides-Extra: dev
Provides-Extra: docs
Description-Content-Type: text/markdown
[Description omitted; length: 6669 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.42.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
spateo/__init__.py sha256=7fxEOmLBzA2KDwrsWflUo68MCrCMBS0uUwG6mzxM4GE 274
spateo/align.py sha256=ms08bm6dyWRpN0-p3XK2KDYDTsqpEHXmwagtWd9VK0c 426
spateo/configuration.py sha256=0_pgLTTqOEsUOEPTnW2lJnj_vCyX5uTetLf-dtmp848 28335
spateo/cs.py sha256=UN-3Pp7u_jRDCZ35y2XIs7iroi8_LgNtTDw9qlsPllw 28
spateo/data_io.py sha256=vipYCiulRgHWziqbspsOvLTlcECfwYbEO_F7QnyMbQE 197
spateo/dd.py sha256=VXFzd0B_NJ8f4eB48YLHxp58lx4B5rbilY5tHJ5ESjc 28
spateo/errors.py sha256=g_cpd_kFRf4ini5YjrO62hHYy1LsNl4CrdT391VfP70 184
spateo/get_version.py sha256=RN1hY_QrKPITHD2NouvngRvOoCaI6xOGDNak9YD-0U0 5841
spateo/logging.py sha256=eJ-A1nq853_Odf9KT32ODc1R5_xIcy9EaE_ZgitbKTQ 102
spateo/pl.py sha256=Ry9pFsRdh7Ywpyvm9XKbSoYkgtJXFXcym9RWvvWKWyY 24
spateo/pp.py sha256=Wk570Ipr34_LHrvZetXC1IhW49HM2C-rgWgVTImJjAk 29
spateo/sample_data.py sha256=LUeQv02koLWvCXEO-ZEsChNCbajcNe8Oo2RSUK6qsok 16340
spateo/svg.py sha256=uCLaHnVdsrRnxsMnb6QoGh3k6-kVvxRLhb7YZmZv1Rc 19
spateo/tdr.py sha256=_-CJWCzRTYz1fxJe53Zh6V4z-qKWqLs33L_1g1ydHMg 19
spateo/tl.py sha256=sJmtlrZOmiu1U9E3lLWETXhYVqBt1vC-bA49dZbPXik 21
spateo/utils.py sha256=z2DsOt_qhWhTlKlDDlsLIbDT_7BweRMogEsyIm0_Kno 1552
spateo/warnings.py sha256=kt-TTavbrG2kOuoRx0lnWHsKS6cA4jK6KUeyXkbLaDc 189
spateo/alignment/__init__.py sha256=u_lFVnpnvEKcNxvzyvqK0KUwANV2tOa6HR9t-tFUl9E 623
spateo/alignment/deformation.py sha256=o1uH0RJ4expM8FE-vTHwmMfRTd_UC_5qAhYCju4kf8k 8504
spateo/alignment/morpho_alignment.py sha256=ub_2KutL4xl6kAbSTtGdZ1tQStg4XjmIzKjeE2IuZUk 21300
spateo/alignment/paste_alignment.py sha256=KquAvyfJaqPI8YElHcee2MRbG_kf3Qc7zRvdzP1sbQc 7811
spateo/alignment/transform.py sha256=me40SRQ4BZy1yB-Cyk5OvnoTTcXaftfK4IG8k7mR6qs 9909
spateo/alignment/utils.py sha256=LXKoj2qKewI961Qq9pFh8Dvmrrzpj35g9k4Ozrn5Yl0 14397
spateo/alignment/methods/__init__.py sha256=Dj8qT8A_cXYTlH4E2_zImMo0UU6pKy6CMBXVwUCF7OE 934
spateo/alignment/methods/backend.py sha256=cWG5T3QAOE1ZS1AcvPFM_iWudSVhyPSwNHGAe2JhEHI 49225
spateo/alignment/methods/backend_ot.py sha256=gnhfaQh_jN4jJbepzMGyRZ6WyEci-UeHfqf8OizOZ5E 96744
spateo/alignment/methods/deprecated_morpho.py sha256=x5qQnuZQSLSvShqfXrVYVmVss_cCWJgj6SY_l30qRFs 53279
spateo/alignment/methods/deprecated_morpho_sparse.py sha256=a6a7E00-8AbdgBleesh3Zg5_4BwoljdLKwQvyeRC_pY 27885
spateo/alignment/methods/deprecated_morpho_sparse_utils.py sha256=L9HVGuY1dS2mJtbmyDugxAar2AEom7w7gScdvX7bQ2w 17965
spateo/alignment/methods/deprecated_utils.py sha256=ZSMb_tOXGjm7Fzkl9_w0jAEh-SCUsMQhvofLzOe_Jqo 108048
spateo/alignment/methods/mesh_correction_utils.py sha256=Mjv1ngTIFsZa0XHV4CU-Os2PMIJ47Y9UCjobPNLveiQ 18949
spateo/alignment/methods/morpho_class.py sha256=NUzq2Sxn4FUattp8svXXJ4dd17UWmW8YdWk-uHgaNE8 64330
spateo/alignment/methods/morpho_mesh_correction.py sha256=v2K8RhAMYH0_gFVZS4SiG1hkMHWObjOzw_l1JRpaVnk 16096
spateo/alignment/methods/paste.py sha256=gU5I0Mi_zNxdF55P7q5pWRt6vRFP8StLhWooB75JRHc 12913
spateo/alignment/methods/sampling.py sha256=IqaJCdhUNsvo08UrclFsSDCbKT4W4Fx7rZod4TMKb4Y 10064
spateo/alignment/methods/utils.py sha256=l9g71uyIBK1KzPPdsvLJngky7F71HzNBMPJOJ7JAmww 51531
spateo/digitization/__init__.py sha256=TXBVM9lTyclGCNVSvjhDkZRlYziKPLp_FPXBc01xBtQ 310
spateo/digitization/borderline.py sha256=YAT5SXfqD10lG_8DWT324OdZ7jnB908Ac8gUaaH4uiw 8573
spateo/digitization/boundary_old.py sha256=wq6QajduXzZiAYNv0txfwWriAFQO-yRdA82HPMDyAiE 4515
spateo/digitization/contour.py sha256=7jCmlX4LDySHO9LvwQpFsOPMys9MvS9j4SQ08KBPHdU 10290
spateo/digitization/grid.py sha256=43jSTV2o3zV00TPYAozOHTiDh4YK9lQSPXt2HB7aArg 8515
spateo/digitization/utils.py sha256=YgJJjwF8pMUz4xUzybOslhOJIWn6QKEnIdf5Nv2p2Rk 22868
spateo/digitization/utils_old.py sha256=3q78ni8a-omoU4JfGr2ScLs-KYCfMr3y7bvxzaJ2fR0 13103
spateo/external/__init__.py sha256=LOyH5fi5YJ4h4P4N1-QNkCk9tZ0vDUgCWN2Gofub6JQ 19
spateo/external/lack.py sha256=TIXkHXh_LVsnNTsB_nLigEteUTw3sDrsrAjWwq36Dt4 12908
spateo/io/__init__.py sha256=59sr-pFkYo8ML1e58u_vGUMCC6jJC59TVmlfxuDMT5w 241
spateo/io/bbs.py sha256=YIs8yFAbqkHsMPTtkzM7rWtcqif6-9MNoT4Fsb2gZw8 6255
spateo/io/bgi.py sha256=udj6CnvLg_2FokodvJB4r0tKKRTCxFszp57tiuRveKE 17809
spateo/io/image.py sha256=v83wSD_40ZDMdX-jedkRP6OZTvhSAQw156yBfQRmYLg 1207
spateo/io/image_utils.py sha256=yp6RkNudeCuyu0ud_wQib48Qhm4pbSFZY8du7ibgV3U 1627
spateo/io/merfish.py sha256=ek-wnlLy9O5ufQt7uGv-CEZ7dW6bgTBL75iEg9JC_wU 1875
spateo/io/nanostring.py sha256=pqEhPw2hMoqUz96d7JjTdq7neYcv9EpNO9SRlY4P8ws 11790
spateo/io/seqfish.py sha256=YNu86cKKNWBzj1FKV4Gk9j8DGqnE6XOuAUllPhakPto 3997
spateo/io/seqscope.py sha256=-Kqm3sm0hcG711xequdknJaYZtiS_BnNGf_BrumNSr8 4760
spateo/io/slideseq.py sha256=Tkoc0HdZDPvlWAyR1PeHwvdfXKaIv6_f2Is7AXN_aZ4 4664
spateo/io/starmap.py sha256=m5FbhEBro0Sd7k34VyiOVZNDYWtCV6NK9E2SilkMulw 2790
spateo/io/tenx.py sha256=SxOHOgeAXDqfqvHnLExUwSKWmWOoDb8bSMXooHJEOE4 3115
spateo/io/utils.py sha256=5nBpRz-nw6r3YyMNMmwRiDxzW3rYeMKg2QHohzTpP8c 8871
spateo/plotting/__init__.py sha256=6g5qAXiYZ3K3N2kMefowV07rz3Yow2_cslwUA2guBc4 109
spateo/plotting/interactive/__init__.py sha256=U-8js7_4u9mdt2rVqBIvGrPVB6dHJKipywNT9TpyA3k 58
spateo/plotting/interactive/agg.py sha256=D5TweprbDFG0lT2wWarn2fR_oM1AKGCFzsfKHMI-l1c 8433
spateo/plotting/static/__init__.py sha256=dgwlR9ksLn1Qt3-dEYDw2ZVPzvWrIEeUiPDW5Sfco7E 866
spateo/plotting/static/agg.py sha256=4nj81SnNycveUmOrbaF-OyE6xaM-xnzWkXw8Q0TYfn8 14670
spateo/plotting/static/align.py sha256=5upziZ4aAqHyjV_Jab8zOTvkQ8YBixKgsk3Ckt5Mqd4 43456
spateo/plotting/static/bbs.py sha256=IvyW9iS6zWsMLbYoWtnrdyIIzotEPw4M8zNNQ2MlSqA 6875
spateo/plotting/static/colorlabel.py sha256=L0B9ksPjUJYshs28yCQ1FHtvMd4P51a1u2D0wnGw_PA 8387
spateo/plotting/static/contour.py sha256=w6BWqOhTOabO7iYi13u6DCPuI9zgFcIhu7CkIDTvN-E 2331
spateo/plotting/static/dotplot.py sha256=xf3u5DAgskYOXHqNVT5iB4Rd3nJVXwr9h71CisAJB0g 83030
spateo/plotting/static/geo.py sha256=Judid2MMn-VaGeg1xznK2RpMNWxj5zz3GkiUBC65EZk 10986
spateo/plotting/static/glm.py sha256=h3d_t_AAoPc2-RJRpRV4XKd_ygcP4VHHX_ALKwjPZ7s 9955
spateo/plotting/static/interactions.py sha256=WKWR0TpuPaAcsgEKVZpCl88OyokYCscsXz_HP8y6zHQ 31258
spateo/plotting/static/lisa.py sha256=39qvxvWT89mdd7sKDsk9yVi3RsHrjNkYHGD_zHBeAMc 2954
spateo/plotting/static/networks.py sha256=kc-iUC9ho0hXPRFFHg1YPZT4U3I95gl4tDY2vPBTivY 22144
spateo/plotting/static/polarity.py sha256=f-T72qm24LswhXgQiHnxFLoQ1ILDZSQLQ6x-_TZrhPY 2072
spateo/plotting/static/position.py sha256=I6-rQo9JTIV9cfVSW6KoWUUeR_8EuWmHcVlhKrFYUXA 284
spateo/plotting/static/scatters.py sha256=038OGDcV9C9LCOH6Kugaj_-6A8vNLBb4e59tfPa2rUw 47698
spateo/plotting/static/space.py sha256=UbflIojFMaKLUOKfx3gdbKC3rUglbz8rkQXrxCBcLtM 19061
spateo/plotting/static/utils.py sha256=YCsNCEPtbQyo5RCT7clwueXMv0RJ87EClhIOpyt3sEs 70356
spateo/plotting/static/three_d_plot/__init__.py sha256=ZjdHTrHLNuzVGsyAEIiJBywcNfqOpwnXFUtvt76i60A 460
spateo/plotting/static/three_d_plot/align_plots.py sha256=Aw8HxC16yylPf1rd_1kZCGRRXMglp6Bom7K1e1tE29g 17546
spateo/plotting/static/three_d_plot/backbone_plots.py sha256=2kNniDc3IwVbx_XtoG_ZLBQnEn-KesIW-_037feqFOI 9692
spateo/plotting/static/three_d_plot/morphometrics_plots.py sha256=hryTsLvWSmJanlEadN37tsdSzEdh2weBIcuvFxyXAek 39035
spateo/plotting/static/three_d_plot/pairwise_align_plots.py sha256=MyzKDzwg9yWx4qhaEziT4BdDOMIi6OM45J8RlYT5iOg 32956
spateo/plotting/static/three_d_plot/three_dims_plots.py sha256=6j2TaK4cRsqk7ND4swwckUwbSwcaq3LRTnexbjoHHJI 56348
spateo/plotting/static/three_d_plot/three_dims_plotter.py sha256=UN7MWysnGLuMly-zUvyuGtwCrhi1UztMd1xC9xcvt0E 26291
spateo/preprocessing/__init__.py sha256=Sykzb4zhPhamDBilUCguo-4V7amWNvq4yWEt5L8sjRM 111
spateo/preprocessing/aggregate.py sha256=1jNwx_MdPICYDG_4usfwdjPAdnprda5lGv5F7VqbswQ 1679
spateo/preprocessing/auxseg.py sha256=p8HarixZmSJ_PjF2tJXF_6DTGENSpz8lstaWJqR8H20 7210
spateo/preprocessing/filter.py sha256=n_qO93PC50W482QVTldKE_dQdBsAth3LxkCi1vymj4s 6643
spateo/preprocessing/image.py sha256=vNmd7cAyfbUOJWvrChCLB71mVVrgnmYDiylCnj-8mo4 2148
spateo/preprocessing/normalize.py sha256=BuR1WaaBzHwwbwKzV4l4GqEoRqbHie0LKSPM0-MbHwM 24743
spateo/preprocessing/transform.py sha256=hTDa5RagXbO044h5zF3pznJlOjmrBzPS5Gz_VLIhdqY 10871
spateo/segmentation/__init__.py sha256=-cQi9z_NMTKjnqkYRTMa3MiYlZGDIf7ffhdEd7yvpck 838
spateo/segmentation/align.py sha256=kwY76vyUUWD0jnVRxwm-8vLEWTvCe2QwESYNy8l4KB8 9315
spateo/segmentation/benchmark.py sha256=ta1bVQZ9K1vD6_gujZ6qw-VqXRQb6MZyMW4ZYPh3yUA 6962
spateo/segmentation/bp.py sha256=kUoslQhXe1HTPGZbzo744TBxeDWFb-TWlVoc3Jcl9wY 5487
spateo/segmentation/density.py sha256=zcp3WmCMjJrajfr9SgS1L3H4Fyyup99f5TyJQU957Y8 10231
spateo/segmentation/em.py sha256=AbOGvVzbN4QCoe0UcTWPo2OsqMwKPgRszzfTo4cfwjw 11819
spateo/segmentation/icell.py sha256=fYOsMOE9rPYbvzy6zVrO6xd-gp-VUZJeMSJJl-ovhGw 18114
spateo/segmentation/label.py sha256=FVye7LFxH7-CpGZIqTXbYumgs0jh4G7i2AKBWjJe4Rs 22559
spateo/segmentation/moran.py sha256=gI_Bx_jrrWNbEK33ItiWKfue5_Nk7iAG4EV5xXWmiMI 6258
spateo/segmentation/qc.py sha256=S8s-9EOpuadxHRVAYu9U0lnOMgWDI-xCcw3yLURcLrs 6922
spateo/segmentation/simulation.py sha256=MqZSqW7azL3FT8Vv0m2NALgniAWIGoGIphR9lgqAcw8 5895
spateo/segmentation/utils.py sha256=66r-gvcC02H9PbE17EC_SIFiugq08ucpxrgIQU2vn4k 12553
spateo/segmentation/vi.py sha256=UtIKjFur_ZMOcMw5IPvE00qLlNUKZ-RV9_Omg-3oQ2I 10281
spateo/segmentation/external/__init__.py sha256=81CkxJnA-h4x_2XzcqOhziOgNBIYiAlaK_x-VaZId-g 43
spateo/segmentation/external/cellpose.py sha256=Aqh635AOnXevK3l9aQtgzc36eZqfVmcezJixN-R54Ok 3618
spateo/segmentation/external/deepcell.py sha256=4IeIu-q-NtJhBm3K9oaF2EY0LbYuWi9UELa0SGY24dc 2712
spateo/segmentation/external/stardist.py sha256=yMabpymmqTlH07kKuOIwjdlJEm2QAVnZ9hCRqLIOABI 7839
spateo/segmentation/simulation_evaluation/__init__.py sha256=LOHzeD9mKDn2gZptP9tqM6pp2EGfuTe4_DzIykOZL00 274
spateo/segmentation/simulation_evaluation/allocate_cell.py sha256=nnX-9A6uIedvfAVQqtf3-XIvaGQLpj22fAokzGtxvXI 6417
spateo/segmentation/simulation_evaluation/evaluation.py sha256=8nXnt8Bbk_DIlSMYdLgovPx7lre0b1lm2fQEjoKbb0A 1329
spateo/segmentation/simulation_evaluation/prepare.py sha256=GGE-720RzIPSiKeUswZccEFGwLWf__uX7zV_m2vvLsI 4269
spateo/svg/__init__.py sha256=Ltec_S58aE1QlXRhkEhGjZ4CjgCRsu86lgVeTtoCvXo 81
spateo/svg/get_svg.py sha256=jct_lw1-E_KBajbIk1XQspV0ZHeN1hurr3hLZI2xzVg 22715
spateo/svg/get_svg_between_slice.py sha256=3_Ee3S2Fotx9aGiFrcaSZCZD6jnvmFB_Ko0d9Uw0yH8 5143
spateo/svg/utils.py sha256=20THTav872a3NCcaR9ZCpJxi3ThfamtgCBop0Wh6iYw 9704
spateo/tdr/__init__.py sha256=duIGsA2HL_Lmm7jHFhFEJjIAb_UHoQKXcAQbm2ian7s 201
spateo/tdr/interpolations/__init__.py sha256=TMBm2pn73QOXtRr9PmhCj7YM_cfiWB7he2xmOwy5p1I 235
spateo/tdr/interpolations/interpolation_dl.py sha256=JdOb3_iE5lMfGNkSxkzQz_AFLMP2_tZ5wtIKW5HdBmo 4275
spateo/tdr/interpolations/interpolation_gp.py sha256=bJ6txajhVDrcicYsoTe4KWBopnI2YA0lpziXbaYm6aU 9073
spateo/tdr/interpolations/interpolation_sparseVFC.py sha256=kdBgvrZJYD1IQofZus1S_QZISGp9VbSa2prFpEk3zkA 3401
spateo/tdr/interpolations/interpolation_vtk.py sha256=pRgo7cL3pXW-nLZef0ZJkslujnyjWOApqNdQgHOvhps 6652
spateo/tdr/interpolations/utils.py sha256=0UnqUXWenNVzk36xYC9qsuInhducVr9QmG40JzdnU3I 2225
spateo/tdr/interpolations/interpolation_deeplearn/__init__.py sha256=IOktR2b-iQdvMh5aGLlil4WHsDABPtDtbrH6_xOKiRg 94
spateo/tdr/interpolations/interpolation_deeplearn/deep_interpolation.py sha256=ubxgbtrCvuAd1TjxTlmS0q4WE1TboMGHVUJsMdvnQEk 19785
spateo/tdr/interpolations/interpolation_deeplearn/interpolation_nn.py sha256=2kf5kDV4GHhwlZImQvt-K5f3n4pqntmVZ9_bdsSBYKI 7800
spateo/tdr/interpolations/interpolation_deeplearn/nn_losses.py sha256=K7Zu48sRo0-xmTpL711-00SmZyO9dgl0V_LxVbD0QY4 1261
spateo/tdr/interpolations/interpolation_gaussianprocess/__init__.py sha256=ndDVi3fqDfL3sFkpKwEO4xx03hWpre6ASpMLN_hE2fE 84
spateo/tdr/interpolations/interpolation_gaussianprocess/gp_models.py sha256=SpcNVkLXS-ZP8OyLIGJSi0lSS8K8Hw3mzSb7r73fVZs 1324
spateo/tdr/interpolations/interpolation_gaussianprocess/gp_train.py sha256=44yW6dnUgqDyh9lXueOm0yQb75j97mO3RBXoFPp6YD4 1596
spateo/tdr/models/__init__.py sha256=G6wHIN9KZzubGuRy2904wvEM_7fMFhFcmHhoavJeBIE 888
spateo/tdr/models/models_backbone/__init__.py sha256=zWWPt5DENxIQwtIusSFnlq76aCK8opyN8y-_A0wewIk 228
spateo/tdr/models/models_backbone/backbone.py sha256=9raeBS5UQO2VOHbZIXhqhgO-7JjxBgPPdLSAQVlEyiY 9114
spateo/tdr/models/models_backbone/backbone_methods.py sha256=nw5L3j3Z3quOGgRjnAVzEu8yTEnLu44_us23BIHlrVA 13486
spateo/tdr/models/models_backbone/backbone_utils.py sha256=E3Z_5RhYDQgW8E2awWa1ocWzdHNaD7FfvuxPu0h07VU 3845
spateo/tdr/models/models_individual/__init__.py sha256=ziePjNhCR2XztC4Urq2Mzi6DZ4K_fnmUCQp26ZeQDU4 138
spateo/tdr/models/models_individual/mesh.py sha256=wk4tIgG_4Kkvrx5AZrcFvnE744UBF66RYj18e4vrUg0 11227
spateo/tdr/models/models_individual/mesh_methods.py sha256=HdDq1zON8UOQMXjHNX3dgc3RzaLTxFkbdQnGE6f8dvo 15275
spateo/tdr/models/models_individual/mesh_utils.py sha256=MGnkmL6ebClbNqmZ2LLhU5kcwcGVKMbMabN03vtDExc 5718
spateo/tdr/models/models_individual/point_clouds.py sha256=xGEHR_eV8DRrQZIPk3qtqFgD2cwOFsnZMUI7T3sxEgc 3471
spateo/tdr/models/models_individual/voxel.py sha256=LV4-60IdbApstcT5-JCsWSeHL3ifKgBgQZ3AWiHnuyk 3686
spateo/tdr/models/models_migration/__init__.py sha256=Yc4HOeSTlrW9QOyjrj9cW7nF9-tYqZInOtDLBynogHk 447
spateo/tdr/models/models_migration/arrow_model.py sha256=Cozuwc1xXoidIEQFp_VIZxGhAVW5MAIxOayTNZngEag 6188
spateo/tdr/models/models_migration/line_model.py sha256=pPDcEyx7DVzGRDCT9OVtVx4jCpmiX3Nx7wBsqoir3xs 6121
spateo/tdr/models/models_migration/morphofield_model.py sha256=hIbPXnF12LpqjEpZDmJy7WSM4kwWCRtcEhLowmCRgmc 5350
spateo/tdr/models/models_migration/morphopath_model.py sha256=dC1KmlI80jeafVjghS9LkxERFfOyEHBXF2X8XT1VtPc 13902
spateo/tdr/models/utilities/__init__.py sha256=MQeaN1PrWVuG85rQBjm3LlaVzpzzZIa_mRQXTS4XweI 263
spateo/tdr/models/utilities/io.py sha256=yFfecWmXJmOO1XQiZkuF3PxT9lePexWvAVPRHldfMvE 1978
spateo/tdr/models/utilities/label_utils.py sha256=OY05rGI5a2WQQb2_9ZSGi0ORaBNqBbcu87LfvtARIjg 4596
spateo/tdr/models/utilities/model_utils.py sha256=hFhiKsHamEyqs0jRqK0o3UgcwWXYxLOyEUhPqaJbxRY 8801
spateo/tdr/morphometrics/__init__.py sha256=bJJF4RvjJoJtDsuI4IMkOQz-wWOiLC_INJGOsuXrHYc 434
spateo/tdr/morphometrics/gene_similarity.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
spateo/tdr/morphometrics/morphology.py sha256=4ngTwU6Z98PH5qPT5xLYfqp8_IuUIP1l3dZ5XdrqTfY 4492
spateo/tdr/morphometrics/shape_similarity.py sha256=hFYFqiKRALFAhzxOcZTRQH3d9Mo3YMx0bX0V77oEDOc 8929
spateo/tdr/morphometrics/morphofield/__init__.py sha256=N8ZnR7VeKnAZVn5Z_YNPV_5E3ytIqZ2eZsfrmXfoia0 142
spateo/tdr/morphometrics/morphofield/gaussian_process.py sha256=oDsbvbO9MInHjpozOT-6gYvQ9GM8oIuEI26OdKEccUs 7292
spateo/tdr/morphometrics/morphofield/sparsevfc.py sha256=GDKk9KpeqnbVfxfDrRpuO1FCijj3QTX1sb5dLYJWgy4 15134
spateo/tdr/morphometrics/morphofield/trajectory.py sha256=WFQBh-F6KEVVh-KCZ7_c0LIDC36R0DSF-JU4KetQHlc 5453
spateo/tdr/morphometrics/morphofield_dg/GPVectorField.py sha256=4d72vgEl3m8-Yw41SVS3oQfBduLbJLEwD2QZ9yHyh0E 9577
spateo/tdr/morphometrics/morphofield_dg/__init__.py sha256=gCiIEs_WEy8ORa5BStqrIwmux3YothbQcTp2D_ryfRw 223
spateo/tdr/morphometrics/morphofield_dg/differential_geometry.py sha256=NW3TTt9E2YLLzKgKA0OpvrUx6xwMp3B5MOPvUdTw2Y8 13163
spateo/tdr/widgets/__init__.py sha256=7yqPan6BOcI6NXWI9dahVfTSHk-e3XVxUzNokqRFdys 243
spateo/tdr/widgets/clip.py sha256=ALZdPbhttJgaWNgZIBBHSuaLnQDsQyh9GJZ1-E3HLuI 6550
spateo/tdr/widgets/pick.py sha256=hF2kBAX4Ah94di8FwQZACXA54PRFfrKWd7xD-LUfCBM 7127
spateo/tdr/widgets/slice.py sha256=wHkOJK0GVJrhlLPX2hPMFL3u26Zp7hByrPr2w-eb-6o 9324
spateo/tdr/widgets/utils.py sha256=lOJRF-1kJ-K_KDHi2vk2zvRCZ7HD4JgPrxmyKiwGjrI 497
spateo/tools/__init__.py sha256=-D8DbhR5hLV4G8pMnDhJTPdN5ehUtCkGqfbjz_E2Nt8 1025
spateo/tools/architype.py sha256=u7gy0a3nC3AJhP5q2kP6WZS94djAHn-bTgZxrZeLcCc 7375
spateo/tools/cci_fdr.py sha256=6h1y07-gVu8tor5PB3eqlEg4-0gOUZ_C9kaB-gN28JI 2302
spateo/tools/cci_two_cluster.py sha256=BcTx6sosxDPG71iua3Ec8KNTbpRi2tZQCVTFKG8yVH0 23120
spateo/tools/cell_communication.py sha256=lUSaFg5tBVbv1ElkvdMTpmwtQ9iG4yMk6LoFOZrsU0c 24281
spateo/tools/cluster_degs.py sha256=VxqwnHOCK66xSBspTOfTcRNBhaUCA4M4Ad892DSgDHQ 21117
spateo/tools/cluster_lasso.py sha256=90M_JjOVGs2p4ThotVW1H-M3Jv1GJQPIOe-wcf3E1N4 3634
spateo/tools/coarse_align.py sha256=AVDlV3V5jLzR34Udp3l7PaWc-_UMZPCVRHWQtN0FXCI 8472
spateo/tools/dimensionality_reduction.py sha256=JwNSpZWIHrZSKEiGEsldPU3SXLkjPhmPlwvfhOqr-f4 36349
spateo/tools/find_neighbors.py sha256=PF9pcqctELRPKSiqK06RsnuWLKeoZQiRyOkBt7uXIQw 35969
spateo/tools/gene_expression_variance.py sha256=MJaGJ4dBE-mXEuK2hVWqce-K-CTt_0MATrEhsVXAOp0 21629
spateo/tools/glm.py sha256=zbLEFuNj4P12a81lnWj1KHuTLQp77kXXgrzgDuFokx4 7733
spateo/tools/labels.py sha256=xBiBazoRQeOV0J5ZcN1Uk16kuLPy7W8JLyztcxPecHA 18366
spateo/tools/lisa.py sha256=FGVMR0aC_NBaxe8nVWVHhRGN-4Yz-6q64dg4y-t0ZeU 18554
spateo/tools/live_wire.py sha256=vGyuU18fLd-gX95_rn7x1td7THKg7whdin5FCjz1Bmw 9057
spateo/tools/roi.py sha256=8ThuZpRp6JndFLaVI_plLBdA4zhPOgDwIl_nLLfFOfA 15167
spateo/tools/spatial_degs.py sha256=ss3dUUriGQ46Jljicj3P-X7w__QgswGSkiDFVp_El9I 6541
spateo/tools/spatial_smooth.py sha256=6XgJr9j7_wc410YZGAGn9kwHJjKIwnBocdkgUyCCSwU 21989
spateo/tools/spatially_variable_gene_ot.py sha256=SlDKuwNE_wtQJs9kVn9Ai3KTQDEw6JVAmVPoQ7epP6s 8604
spateo/tools/utils.py sha256=HR_pzzsR5O0uVL6jyl_-Ezv_4k5nI9_I-HL623T_7GY 15042
spateo/tools/CCI_effects_modeling/MuSIC.py sha256=wR77KtBtNDl4B96vZ4Ufpxcp1aAScjeb4ExDHm-iR0U 212526
spateo/tools/CCI_effects_modeling/MuSIC_downstream.py sha256=C9Iqufx1jQiL9lXsu5B3rP3hyh3efFa6jXb3WAxlz80 415388
spateo/tools/CCI_effects_modeling/MuSIC_upstream.py sha256=LeByPenv8lavtv-V95y24dvCQ_aR8phKdZ501eHkm5w 18572
spateo/tools/CCI_effects_modeling/SWR.py sha256=M4OTJoQBvfjPe9M_kzx3nWm2Ecg-IXV4C_s48FRNB2o 43199
spateo/tools/CCI_effects_modeling/__init__.py sha256=BDKQjScnj2qldIh0kYTrnC5iMP4sX_ghsEudSJ8jJEU 388
spateo/tools/CCI_effects_modeling/distributions.py sha256=djAOOaRAWBMwnp4BmfnwtZIDRkmrN9vYaIyrkKDpJR0 46990
spateo/tools/CCI_effects_modeling/regression_utils.py sha256=y17cgHmzueCbGZ1C-PnN6Pp8C1GdJLmTB9TbwcX7WA0 35007
spateo/tools/cluster/__init__.py sha256=HOzo6LhUFh0BlBuQorlf9zoM5zW5qrKr7mwLzmxwA-w 211
spateo/tools/cluster/cluster_spagcn.py sha256=o4vJFh5OAQtTxyDYXiUTwEuiQJft3u35CYXMDf1wnh4 5384
spateo/tools/cluster/find_clusters.py sha256=JsNj8BOOiPVwuPpiGZFUzDDghXOYqeyOrSqF4H_2Bt8 8729
spateo/tools/cluster/leiden.py sha256=2Y2xIiBoXnRdS2M_ww7O1NpbUX-ytOZtzwva2stKkKs 3557
spateo/tools/cluster/spagcn_utils.py sha256=eVPSmQ2B-I3iJ17AZFR1dcoW427rkFz0E3wtmp-ZifU 19765
spateo/tools/cluster/utils.py sha256=MBke4BfJWyaQZ1bZrZwY0jDncsPCfpa1D5CSBYpGcNs 12324
tests/io/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/io/test_bgi.py sha256=oLJLSE4GBm3WyWW4i_euZw-Gpf0Z5S3yPrh5-HqeN5g 1051
tests/io/test_image.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/io/test_utils.py sha256=3u5DQbocnDKmsAV9Q_vl6W4QmiKSJFZlgtd_cMFegJ8 611
tests/preprocessing/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/preprocessing/test_filter.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/preprocessing/test_image.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/segmentation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/segmentation/test_align.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
tests/segmentation/test_bp.py sha256=Zjzk2dN6UtNHKoYUKe-B8bJgMKiYYJ-g8uqb2FLNET0 1524
tests/segmentation/test_density.py sha256=uSbpsGeWx3iQc3rtiStXxneIP0ENmcYdqCkVa4puEWc 2415
tests/segmentation/test_em.py sha256=XczhhvWC6x6NotW4K1jHKoioHI8kB4ZGOxWtnMHAVf8 4124
tests/segmentation/test_icell.py sha256=5IOpaNUH1SYtC5BI0HDPym8x2Ifu_4knDqDGfwXbx6I 8741
tests/segmentation/test_label.py sha256=OQnqy3xxSSC90VyUm8zgrOgdBYFrZDGBOnI-4tMbg88 4842
tests/segmentation/test_utils.py sha256=k6AT6JP04Ym2ZjJrqpWWYZeAaooJyS7DP_G4djQTE0U 5143
tests/tools/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
spateo_release-1.1.0.dist-info/LICENSE sha256=sJM0IQ5Ud4PrPGHYrEwJJmWyZBlZ2q6ZGFbyumAz2-w 1319
spateo_release-1.1.0.dist-info/METADATA sha256=841sS9YNWTZjn3X6Ff1I1L5rC9LOuHWH-WD7qoLa81M 11266
spateo_release-1.1.0.dist-info/WHEEL sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM 92
spateo_release-1.1.0.dist-info/top_level.txt sha256=6h78aSB_SBc9VcXGpwSfgn_mqJ7vNPTApTOPLvL2soA 13
spateo_release-1.1.0.dist-info/RECORD — —

top_level.txt

spateo
tests