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spacr

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Project: spacr
Version: 0.0.36
Filename: spacr-0.0.36-py3-none-any.whl
Download: [link]
Size: 210079
MD5: aa917478345af81a084c8174cd7c1c59
SHA256: 119915a23af744a7d5b4ee9f302b87d5eb14d6fef90837a43101a1f57c288813
Uploaded: 2024-05-31 17:42:46 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: spacr
Version: 0.0.36
Summary: Spatial phenotype analysis of crisp screens (SpaCr)
Author: Einar Birnir Olafsson
Author-Email: olafsson[at]med.umich.com
Home-Page: https://github.com/EinarOlafsson/spacr
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Dist: torch (>=2.2.1)
Requires-Dist: torchvision (>=0.17.1)
Requires-Dist: torch-geometric (>=2.5.1)
Requires-Dist: numpy (>=1.26.4)
Requires-Dist: pandas (>=2.2.1)
Requires-Dist: statsmodels (>=0.14.1)
Requires-Dist: scikit-image (>=0.22.0)
Requires-Dist: scikit-learn (>=1.4.1)
Requires-Dist: seaborn (>=0.13.2)
Requires-Dist: matplotlib (>=3.8.3)
Requires-Dist: shap (>=0.45.0)
Requires-Dist: pillow (>=10.2.0)
Requires-Dist: imageio (>=2.34.0)
Requires-Dist: scipy (>=1.12.0)
Requires-Dist: ipywidgets (>=8.1.2)
Requires-Dist: mahotas (>=1.4.13)
Requires-Dist: btrack (>=0.6.5)
Requires-Dist: trackpy (>=0.6.2)
Requires-Dist: cellpose (>=3.0.6)
Requires-Dist: IPython (>=8.18.1)
Requires-Dist: opencv-python-headless (>=4.9.0.80)
Requires-Dist: umap (>=0.1.1)
Requires-Dist: ttkthemes (>=3.2.2)
Requires-Dist: xgboost (>=2.0.3)
Requires-Dist: PyWavelets (>=1.6.0)
Requires-Dist: lxml (>=5.1.0)
Requires-Dist: pytest (>=3.9); extra == "dev"
Requires-Dist: opencv-python; extra == "full"
Requires-Dist: opencv-python-headless; extra == "headless"
Provides-Extra: dev
Provides-Extra: full
Provides-Extra: headless
License-File: LICENSE
[Description omitted; length: 3503 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
spacr/__init__.py sha256=mDi-Qu5r1vZnqIbUBV1JAoSq-mxmMEOmni1JSG2e4Wo 879
spacr/__main__.py sha256=_qRkhbFrH_cXr7AZs6KHL8Hh4VApqNdpNCtiKn2ePTo 285
spacr/alpha.py sha256=1LUtTaeVHqcTMxoCMA7mlsNYyaR0KEaXglwXsUQLwKo 13776
spacr/annotate_app.py sha256=oP3aHbtWyvlg7Hnee5GIHzqeM8Jwf5Y9N2n6bO7ZtfY 20032
spacr/chris.py sha256=YlBjSgeZaY8HPy6jkrT_ISAnCMAKVfvCxF0I9eAZLFM 2418
spacr/cli.py sha256=507jfOOEV8BoL4eeUcblvH-iiDHdBrEVJLu1ghAAPSc 1800
spacr/core.py sha256=_R8gXNnjf680yrnbCi2piWQUz7PDbqWYn7SL5MACLfo 156457
spacr/foldseek.py sha256=cWtLzvFF2O_mq5I71UMiuU9DTvDCp7wl6aaWAZRrBZc 33970
spacr/get_alfafold_structures.py sha256=n0g8gne-oyAV3Uo6qxZoJq5X1cUUyD8u0pOC_W2PX40 3541
spacr/graph_learning.py sha256=sD4eOC7Q16rr7WO20mCi_E16_LqioGUUgPamAHIIeNI 12568
spacr/graph_learning_lap.py sha256=MyNRLb63gsjBlui-ByZ0anHugYulL6M-OsGm8rnGBmE 3385
spacr/gui.py sha256=2d2JHYVWhEFUkB3u_2OarCV_V07eLtJKUMKVKuJ7nAo 6430
spacr/gui_classify_app.py sha256=fWJOQO0NjhymdRxccQYlMVbDKBKEPHbAbU9NEdp0peI 7921
spacr/gui_mask_app.py sha256=FXSMasIFBUZWXpVXELR21UevK8g65xqLxio9B2xEyYM 9754
spacr/gui_measure_app.py sha256=tkshD4KOydHTWeViwkjQILowJUVs4PNhBZzy76jxssI 9680
spacr/gui_sim_app.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
spacr/gui_utils.py sha256=f1kyecWyHygw9Eb67PbZ-wWXtn2b85E0LcOLl2Fi3g8 40717
spacr/io.py sha256=sqWiLtUFiholVSAfMbeK8ssuAl9BiRzgfv9ixMsWDRE 108691
spacr/logger.py sha256=7Zqr3TuuOQLWT32gYr2q1qvv7x0a2JhLANmZcnBXAW8 670
spacr/mask_app.py sha256=dAMYQLn8jVbtsuoJ98p_Oih_XSMZpdOVPlefgjdVAZM 39378
spacr/measure.py sha256=bS79LNOfb7j7_qf_lS9NVdO2vcgFsHC8DvPsSgMnvTA 54690
spacr/old_code.py sha256=ujL-shd353C_Ac74MtzUTEHdpqsDguNwe_5FziUGA-M 11227
spacr/plot.py sha256=VtDKTJ_zo8CAVC3ILuIN_wUP6197vq089wNZuom7T8g 61655
spacr/sim.py sha256=2NR5hm--HVcYQnj1SCHoUCVbh_b2XUjjjfoAUIXFwnQ 72997
spacr/timelapse.py sha256=plPjR8nZ7_Q50VAvMvHK2TUE4F-vh7R23JnI6tSW02g 39661
spacr/train.py sha256=lp66dWYkiMMlgdYlMjAsJnkIZFWLizKB-xwyVnKgFBs 25904
spacr/umap.py sha256=4QSrQ16Og-Ijq-SwguMQT2f20UWz1LE5HQeSLmzSl8c 29370
spacr/utils.py sha256=D3WRf_0w0T6dZHh3BfwScGBQjorljgWW6CQUdM0ToN8 120918
spacr/version.py sha256=axH5tnGwtgSnJHb5IDhiu4Zjk5GhLyAEDRe-rnaoFOA 409
spacr-0.0.36.dist-info/LICENSE sha256=SR-2MeGc6SCM1UORJYyarSWY_A-JaOMFDj7ReSs9tRM 1083
spacr-0.0.36.dist-info/METADATA sha256=NzLoqcIVHlvAZyDGvBM7lXQXeDGsop8N15bKVFTi3RI 4973
spacr-0.0.36.dist-info/WHEEL sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ 92
spacr-0.0.36.dist-info/entry_points.txt sha256=_khj_UcegrI5N29QcgxECsxVsfpVQzG3U5OUoKdtTcw 288
spacr-0.0.36.dist-info/top_level.txt sha256=GJPU8FgwRXGzKeut6JopsSRY2R8T3i9lDgya42tLInY 6
spacr-0.0.36.dist-info/RECORD — —

top_level.txt

spacr

entry_points.txt

[console_scripts]
annotate = spacr.annotate_app:gui_annotation
classify = spacr.gui_classify_app:gui_classify
gui = spacr.gui:gui_app
make_masks = spacr.mask_app:gui_make_masks
mask = spacr.gui_mask_app:gui_mask
measure = spacr.gui_measure_app:gui_measure
sim = spacr.gui_sim_app:gui_sim