sisua

View on PyPIReverse Dependencies (0)

0.4.3 sisua-0.4.3-py3-none-any.whl

Wheel Details

Project: sisua
Version: 0.4.3
Filename: sisua-0.4.3-py3-none-any.whl
Download: [link]
Size: 143687
MD5: 0fc9652edebf83c329a2d44ae3d97b18
SHA256: 69eca8224bfcbd94190f3819d6d894364e3c2a816c7e4e96b5df26b9d468404b
Uploaded: 2019-09-20 13:09:34 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: sisua
Version: 0.4.3
Summary: SemI-SUpervised generative Autoencoder for single cell data
Author: University of Eastern Finland
Author-Email: trung[at]imito.ai
Home-Page: https://github.com/trungnt13/sisua
License: MIT license
Keywords: sisua
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.6
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Education
Classifier: Intended Audience :: Science/Research
Requires-Dist: odin-ai (==1.1.1)
Requires-Dist: seaborn (>=0.9)
Requires-Dist: pandas
Requires-Dist: scanpy (==1.4.4)
Description-Content-Type: text/x-rst
[Description omitted; length: 4232 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.33.4)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
sisua/__init__.py sha256=8P43uccnHbKV4EVWcP8bgm8nPSf5e37lpGx3laXC1ts 167
sisua/analyze.py sha256=LSg93yvcin3rYmxjyc9ccV23laxKFeNYKJeKAOF30n4 5017
sisua/baselines.py sha256=Tm9T4DYWtapJrWoSAqDBroPFb3Fwg6w2xpR63jJqw6U 8416
sisua/cross_analyze.py sha256=HNk__R2SXiuaVkZAQ4t1n30tVp6Kxqf-NywccLELN0c 7668
sisua/label_threshold.py sha256=fyI3Y0NeDvVzXm3EhrVGG0Vs_-nEbU3FZ_wngnXRsOA 17430
sisua/train.py sha256=-2-7ivtCyBTIK4S_ZZ2HuBCpEh1D2gy-omwkkPhxRMQ 9895
sisua/analysis/__init__.py sha256=Xrkqp7-o8-Bbk6SjQYYw01liJoPSSHWEB9hT-3O6ruc 176
sisua/analysis/base.py sha256=B-_8PjMWc0-vXvlXNPNvZJfodfaNa7tQN9CCN7d14Xs 39329
sisua/analysis/imputation_benchmarks.py sha256=FZ_rPnSUFFPmnuw2neY2axtv4lAH2LAWUCqfm7vrcR8 7802
sisua/analysis/latent_benchmarks.py sha256=bSjpIzJddI7xApDOgXHsKpTI1oJNgwzGPgIjyauZtkY 19370
sisua/analysis/protein_benchmark.py sha256=0MUtz5J2hC8YHKJ1WL2EYr7ZfcRi_90wiLqfFd9miNk 65
sisua/analysis/results_sheet.py sha256=AWEZES52JfDTXLxEYUA325wJ0Xzj5DZtAQRbq5sFDK0 25701
sisua/analysis/sc_metrics.py sha256=9rRDyk8r_LgJH-Bs3ILS0JVmnyzexhMuWwVysP5c1y4 13468
sisua/analysis/sc_monitor.py sha256=JJuqtaI6J2DLK3rs-eWAjPKkQpvRBptYgmWZxQ5pT2s 6910
sisua/data/__init__.py sha256=COKAxZkUNkPR6u8QA7YhLSFFCOFgoALoZMd_lBbvP3A 14110
sisua/data/const.py sha256=drrfY19TiufZYq1lrCywp0vOJi5LeoggJbx6DDgKKi0 1505
sisua/data/normalization_recipes.py sha256=a9nLIHHDlynQ6jZDnJs2str6X3p0x-PLCAncJ07Fq4U 11983
sisua/data/path.py sha256=Alf6H-6x00PK-aYSbm_6yqIk1QCpUpf7-3DjkGwCz5Q 1246
sisua/data/single_cell_dataset.py sha256=KX-GoMNjTLXxujxpPfD3xxMttbR4Ra40zVxC1psNztw 46122
sisua/data/sisua_to_scvi.py sha256=8w5iZX8m-Khed9X-fUXnin3QKQPwK6xPyQVVEOGgL7w 1635
sisua/data/utils.py sha256=Cc6WRydcxZoFZenvlZ1BKng6A_DBXO_yqgoM7s0Uj8Y 6504
sisua/data/data_loader/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
sisua/data/data_loader/cbmc_CITEseq.py sha256=OLJ6y5pJFwOO0wETKCBsicL_p_J3XZEQNPJFNdiTC3U 3186
sisua/data/data_loader/centenarian.py sha256=nLlHVtiJjZVgBnWPlNBbEmVNGcJNXQoxkTdA5HKLuH0 5416
sisua/data/data_loader/dataset10x.py sha256=uGHBynQor_ccX0Uh-HVFuDG0YLqA24omZeog2Lujk4Y 7131
sisua/data/data_loader/facs_gene_protein.py sha256=F7rcyBBFwKkp6iqNOauG7NWyso9vhU3UkWQIBtfvJ6s 8272
sisua/data/data_loader/fashion_mnist.py sha256=3L_l9Kztbv4QfQ9tmpR7w8KKuJepFR3A2ksLgpPH3sU 2559
sisua/data/data_loader/mnist.py sha256=ZW537rLzlC2mtq0UlYkG13z54RrBOhzQ5lfInChXWys 3995
sisua/data/data_loader/pbmc8k.py sha256=0dV6srsjWqN490y9XUpALj2mQxR6lPoKbSbXx6KDND4 4457
sisua/data/data_loader/pbmc_CITEseq.py sha256=6vIm6o6FeLC3xiArG7UtYKMj2gHblcb7Ftz47Md3LkI 5181
sisua/data/data_loader/pbmcecc.py sha256=-dOWmnlpNT1DQfcnfHFHs1Pz4x-IJa9TlKMMafTqQK0 2963
sisua/data/data_loader/scvi_datasets.py sha256=-nyWmdbZuzaEuHtj7_HLsYokvQebzXz-Lrp7bvwVqSM 5791
sisua/data/experimental_data/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
sisua/data/experimental_data/pbmc_8k_ecc_ly.py sha256=Jf-oFl7APEQKzPfRuDbjgIbFNyssH9LU62lhBzHLATw 5107
sisua/inference/__init__.py sha256=nD-WhRdKHhDI6_r-7j0fNqpv0a0JiUDAVttVEYjwIg8 152
sisua/inference/_consts.py sha256=Lh51vidPkS5ysfM7q9lcYwU18sJhIJ8Q9U4jY7mCAn8 28
sisua/inference/inference_base.py sha256=ne5ya-Yfw5DAmrfaYBarAjo1SKv9k2UPgTKBTw3RVbg 52401
sisua/inference/inference_dca.py sha256=dfqmPqADE01ly2vvGCdGRrYGaU97BgYXfDw2veDlQ-k 12521
sisua/inference/inference_scvi.py sha256=TDG5tP6t-RfVxRv1O8NrTrhz30Cx4t1MeZ7yFNlwFdw 15035
sisua/models/__init__.py sha256=jaXrcMCLMPm4WuTfkSP3xpMdD-qFGMX_yeYNkNIY0-0 934
sisua/models/autoencoder.py sha256=2VtOmtpKTA46-dQ3HoYyapi-npCR32V3kLqV_tsO30Y 4083
sisua/models/base.py sha256=04sFnSrGCL3PMbKB_YDf0LasJkvyhI_u13UBLyw6F2Y 26963
sisua/models/latents.py sha256=rZACF14_-Pn95QsACKRwn5c3a3kO-M_zRETveMfcZlI 2788
sisua/models/networks.py sha256=4NGTe5HMow2k-No8JvXPoScbD_Nw1q2wBjCmII4MlO0 1488
sisua/models/scscope_models.py sha256=pPdCsal58Id2DcUrX7QML62kyr3rUVOki0_1-m-hROE 2266
sisua/models/scvi_models.py sha256=eC4lGMFuHUKftvv35iu-T7BwqW-rjfjvQpfnhj98QIo 8339
sisua/models/semi_supervised.py sha256=v3WOBslRFhvg5qmWj8LD7_-Uvegi77hq799f0vRaY6E 2703
sisua/models/variational_autoencoder.py sha256=WKKRDcXBxByGJOyZmiBAaGzhkV2LaIkNafEOyp6Ns_M 4321
sisua/utils/__init__.py sha256=5iDaum9qxc0haf_JnwpD1XxYq6GwnpNqmggxEsVoPcU 490
sisua/utils/io_utils.py sha256=8TG_ZDUAWc2NO-2TnCT0eqw7d8SvA0DYarPcmAIMEKU 1843
sisua/utils/others.py sha256=ZLS3fM02PnVKWVLiV2vzqZfvtr_6mZr8TAclc0EbQEI 5369
sisua/utils/plot_utils.py sha256=rtODYxqKKx_D2t7rrqJQT3BPvTtQrJwLOsJhGTj4r4g 5135
sisua/utils/visualization.py sha256=LVBOIwRpfQ0K_UYYRv0cbuJYM31ERLcECqyrUDSHiUw 28142
sisua-0.4.3.data/scripts/sisua-analyze sha256=hqEhwHD5ufMZobLP2gMUsQumfiIztVrlHH31cpsCErk 77
sisua-0.4.3.data/scripts/sisua-train sha256=ubbvCr5HPvEvVsrU4kgAkCNLG34kyKfzNJYRee5KAuQ 75
sisua-0.4.3.dist-info/LICENSE sha256=Zdc3chuyBjpr7uZDRbaRqDS7yT9_TZh3vLULIjZS4to 1064
sisua-0.4.3.dist-info/METADATA sha256=WA8-VNyxtYAoKTuzbwxpCtsT5h1Mek0-w_Zf3fXgl-s 5281
sisua-0.4.3.dist-info/WHEEL sha256=S8S5VL-stOTSZDYxHyf0KP7eds0J72qrK0Evu3TfyAY 92
sisua-0.4.3.dist-info/top_level.txt sha256=nQj9TbtYUWCttkauadf5v_lPle0aswMGrG2rXpTUsUs 6
sisua-0.4.3.dist-info/RECORD

top_level.txt

sisua