Wheelodex » Projects » SigProfilerExtractor

SigProfilerExtractor

View on PyPI — Reverse Dependencies (2)

1.1.25 SigProfilerExtractor-1.1.25-py3-none-any.whl

Wheel Details

Project: SigProfilerExtractor
Version: 1.1.25
Filename: SigProfilerExtractor-1.1.25-py3-none-any.whl
Download: [link]
Size: 495464
MD5: d26df1525c09eea40e02750ffe425a8e
SHA256: 64b2e5c7e3cde01fbc3e7e6c4ace111c8e3978f08ab6e671eab13e2d4a7a3c68
Uploaded: 2024-12-10 05:00:14 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: SigProfilerExtractor
Version: 1.1.25
Summary: Extracts mutational signatures from mutational catalogues
Author: S Mishu Ashiqul Islam
Author-Email: m0islam[at]ucsd.edu
Home-Page: https://github.com/AlexandrovLab/SigProfilerExtractor.git
License: UCSD
Requires-Dist: scipy (>=1.6.3)
Requires-Dist: torch (>=1.8.1)
Requires-Dist: numpy (>=1.21.2)
Requires-Dist: pandas (>=1.2.4)
Requires-Dist: nimfa (>=1.1.0)
Requires-Dist: SigProfilerMatrixGenerator (>=1.2.25)
Requires-Dist: sigProfilerPlotting (>=1.3.22)
Requires-Dist: SigProfilerAssignment (>=0.1.4)
Requires-Dist: statsmodels (>=0.9.0)
Requires-Dist: scikit-learn (>=0.24.2)
Requires-Dist: psutil (>=5.6.1)
Description-Content-Type: text/markdown
License-File: LICENSE.txt
[Description omitted; length: 18034 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
SigProfilerExtractor/__init__.py sha256=86R3kPXTji0XI67Ie2oZaWb3Jttvlz4gV8CywdoVJIA 50
SigProfilerExtractor/estimate_best_solution.py sha256=8v8au34HTkFCigrvCjhKFn6DgXjtofsMNU_2C-GFfnE 3886
SigProfilerExtractor/nmf_cpu.py sha256=85GLaFcqBVk7NKVCzcKwJIkY5fMiimeK50uxYWXdscg 10291
SigProfilerExtractor/nmf_gpu.py sha256=yDDyWBcLwdbJeb1e8vulgLy_HCc-z3VbGCjYnylRE9M 10165
SigProfilerExtractor/sigpro.py sha256=nof-nvkEziIJleO1ZozRvKG_Xe91n4WoDZtDT_bPyqg 46785
SigProfilerExtractor/sigprofilerextractor_cli.py sha256=t4ues135UR9w3Vu4kJmWB7WT9s0pzeucNqiB-QKIxZQ 819
SigProfilerExtractor/subroutines.py sha256=-XEpHy_DwBs7TKq_uP8Odv69Qi0jvZhVoadj74irH2Q 68812
SigProfilerExtractor/version.py sha256=_h5xOSel8bZ298y8OyQ_3n1Hkywiu899kXNQCtDWpZU 206
SigProfilerExtractor/controllers/cli_controller.py sha256=HDsg45bgYnOl-hVHriNwjJs_dOkgnQRSfcjtv0D-QLQ 8927
SigProfilerExtractor/data/CNVInput/Battenberg_test.tsv sha256=C-1MFcKzgAaYofmqRdpji_Xfu-uvnmQ4lQTeZOsYsa8 885369
SigProfilerExtractor/data/CSVInput/csv_example.csv sha256=V1NZm9p1E4kj9gSqrvu1_S51aHkhVkcMMEg00f76EE8 3851
SigProfilerExtractor/data/MatObjInput/21_breast_WGS_substitutions.mat sha256=LyZbW5p39pz5yHt60QLnkD8XDGtZFNQHrN-iyn48240 3342
SigProfilerExtractor/data/ReferenceFiles/CNV_features.tsv sha256=ugZNJUNLQ5Vusct60IaWcJSUUqxu6P_D-IlJj2zqUPo 803
SigProfilerExtractor/data/ReferenceFiles/CN_classes_dictionary.txt sha256=_DXtq5eId4lGOdF8htPxzu3N-4avIWyl1AWmCzaGJOs 1641
SigProfilerExtractor/data/TextInput/Samples_CNV.txt sha256=e_yeHQh5ddiRHyMpxBgA6SkJ6VKPaj8lLQcQ_QEGxWI 12790
SigProfilerExtractor/data/TextInput/Samples_DBS.txt sha256=H9vmHBL4BWm3p1yuhaFpzLMD9kFik9CpUT-Pqo_6ox4 1469
SigProfilerExtractor/data/TextInput/Samples_ID.txt sha256=_Zsrie9ig7Ue8590h6qIO8kBCyR8DnAjh3RnX-5hvbo 2087
SigProfilerExtractor/data/TextInput/Samples_SBS.txt sha256=_NqBTgmIHNr7CDFw9MHTur8zLDCUOX4OUFsTnIf3ebw 7124
SigProfilerExtractor/data/TextInput/Samples_SV.txt sha256=dQHswBoWLMRZmYT4kiniYGfI-WbxT6h4sP1fE69olzQ 1165
SigProfilerExtractor/data/VCFInput/PD3851a.vcf sha256=cpJSgBpqHcw2VH6orknYmoVTg65hpE056iT0yaGNcpI 42134
SigProfilerExtractor/data/VCFInput/PD3890a.vcf sha256=i8v7dWQBdWAEWXwjF-Z6OG6h-i6pr0GR6u6lTuqIhwM 144692
SigProfilerExtractor/data/VCFInput/PD3904a.vcf sha256=SekC5MjZQ1wAOVQV3kjAIjvsL5lOstDlagOMK0XU6nY 132516
SigProfilerExtractor/data/VCFInput/PD3905a.vcf sha256=vf6YH22GpRtp-NvMulpbhaHmMQzsKSnmguF2oDakP5A 108261
SigProfilerExtractor/data/VCFInput/PD3945a.vcf sha256=K1DxZEaMk0abDt-nGnx6MXVyhIFqNCg_STE5XtbdzZk 243267
SigProfilerExtractor-1.1.25.dist-info/LICENSE.txt sha256=5TJH23raqYq_6ZBV6Czri6cvYV78kcCfllA_tdKpcbI 1351
SigProfilerExtractor-1.1.25.dist-info/METADATA sha256=6usFvxoKLs1hptDtb_IhLB9HX6p99pCF_KSk0s1TShE 18789
SigProfilerExtractor-1.1.25.dist-info/WHEEL sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA 92
SigProfilerExtractor-1.1.25.dist-info/entry_points.txt sha256=JVLEVcxnwlXGvMsYREc4OwHNB74tkuAuaMsahAE-JoM 101
SigProfilerExtractor-1.1.25.dist-info/top_level.txt sha256=6PjHqV28BkOTBTczRP4pmD6ffSwZV9_NK4xqPlLdKx0 21
SigProfilerExtractor-1.1.25.dist-info/RECORD — —

top_level.txt

SigProfilerExtractor

entry_points.txt

[console_scripts]
SigProfilerExtractor = SigProfilerExtractor.sigprofilerextractor_cli:main_function