Reverse Dependencies of sequana-pipetools

The following projects have a declared dependency on sequana-pipetools:

• MergeGI — Merge MGI fastq files
• sequana-bioconvert — description: convert NGS format from one to another using bioconvert
• sequana-demultiplex — Pipeline that runs bcl2fastq and ease demultiplexing of Sequencing data
• sequana-denovo — Multi-sample denovo assembly of FastQ sequences (short read)
• sequana-depletion — A pipeline to deplete reads from a given reference
• sequana-fastqc — A multi-sample fastqc pipeline from Sequana project
• sequana-mapper — A multi-sample mapper to map reads onto a reference
• sequana-multitax — A multi-sample and multi-databases taxonomic analysis using Kraken
• sequana-nanomerge — Merge barcoded or non barcoded fastq files generated by Nanopore runs
• sequana-revcomp — reverse complement a set of FastQ files
• sequana-ribofinder — A multi-sample identification of ribosomal content
• sequana-rnaseq — A RNAseq pipeline from raw reads to feature counts
• sequana-variant-calling — A multi-sample variant calling pipeline