scslat

View on PyPIReverse Dependencies (0)

0.2.1 scslat-0.2.1-py3-none-any.whl

Wheel Details

Project: scslat
Version: 0.2.1
Filename: scslat-0.2.1-py3-none-any.whl
Download: [link]
Size: 33625
MD5: f4099cd54127073609103447bc6ac938
SHA256: 40cd511cc83acb2b8bbe0c72d23ee42780b90b5aa5e68be3cacbdfcdf007a9c5
Uploaded: 2023-04-17 08:53:59 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: scslat
Version: 0.2.1
Summary: A graph deep learning based tool to align single cell spatial omics data
Author: Chen-Rui Xia
Author-Email: xiachenrui[at]mail.cbi.pku.edu.cn
Home-Page: https://github.com/gao-lab/SLAT
Project-Url: Documentation, https://slat.readthedocs.io/en/latest/
Project-Url: Repository, https://github.com/gao-lab/SLAT
License: MIT
Keywords: bioinformatics,deep-learning,graph-neural-network,single-cell,spatial-omics
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.8,<4.0
Requires-Dist: anndata (>0.7)
Requires-Dist: faiss-cpu
Requires-Dist: h5py
Requires-Dist: harmony-pytorch
Requires-Dist: ipykernel
Requires-Dist: ipython; extra == "dev"
Requires-Dist: jinja2; extra == "docs"
Requires-Dist: joblib
Requires-Dist: jupyter; extra == "dev"
Requires-Dist: leidenalg
Requires-Dist: matplotlib (<3.7,>3.1.2)
Requires-Dist: myst-parser; extra == "docs"
Requires-Dist: nbformat
Requires-Dist: nbsphinx; extra == "docs"
Requires-Dist: numpy (>1.19)
Requires-Dist: opencv-python
Requires-Dist: packaging
Requires-Dist: pandas (>1.1)
Requires-Dist: papermill; extra == "dev"
Requires-Dist: plotly
Requires-Dist: pynvml
Requires-Dist: pytest; extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: pyyaml
Requires-Dist: scanpy (>1.5)
Requires-Dist: scikit-learn (>0.21.2)
Requires-Dist: scikit-misc
Requires-Dist: scipy (>1.3)
Requires-Dist: seaborn (>0.9)
Requires-Dist: sphinx; extra == "docs"
Requires-Dist: sphinx-autodoc-typehints; extra == "docs"
Requires-Dist: sphinx-copybutton; extra == "docs"
Requires-Dist: sphinx-intl; extra == "docs"
Requires-Dist: sphinx-rtd-theme; extra == "docs"
Requires-Dist: sphinx_gallery (<0.11,>=0.8.2); extra == "docs"
Requires-Dist: torch (>=2.0.0)
Requires-Dist: torch-geometric (>=2.3.0)
Requires-Dist: torchaudio
Requires-Dist: torchvision
Provides-Extra: dev
Provides-Extra: docs
Description-Content-Type: text/markdown
[Description omitted; length: 3922 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.5.2
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
scSLAT/__init__.py sha256=KPWDGflcHb5IqX87220h9VeJ6PWkhvqdhw1g8FFuf5Y 339
scSLAT/metrics.py sha256=WkGVLAUZAPsRqUZuAKmWQqmL9rS8fmFeOuVUVYLXh0o 9198
scSLAT/model/__init__.py sha256=iwtcvkbYBHdJxWhRPjfCS_8zHMDpcXjDsGBdHa0bb5k 193
scSLAT/model/batch.py sha256=Ud2pzr_c0D8NgK30-bSffURwdEWwuhBL8BbqbtLUQ9Q 1969
scSLAT/model/graphconv/__init__.py sha256=_s8k3o5cQz9cJIHFUmHOQlliqn-ghcvoqnKchWI8hDg 70
scSLAT/model/graphconv/combnet.py sha256=djhHE0MlaKsRatZDmBKkObV2m-4z0JwPp5cn20ug7yM 2396
scSLAT/model/graphmodel.py sha256=8q2wiGIZ6OF3Ao6wXh0QP2xpQrO8ItYb7hEs68DsCbw 3712
scSLAT/model/loaddata.py sha256=5ePOPzOXMw1aO8XL0-wsw-hhW1U9RWUuaz24OG6y_bg 11049
scSLAT/model/loss.py sha256=v7Mk-9rzUe8ytNGe92O3i1acfwRwipKOxqNu9v-L4f8 476
scSLAT/model/prematch/__init__.py sha256=m8fgmgDc_BkoIEIYVimjlBO5mCeCW0sFzgvihsFHOKI 39
scSLAT/model/prematch/icp.py sha256=ulP2eOUE5oig3wQzdHAB_wE9me1r5fT6KgZjVVJJFN4 4527
scSLAT/model/prematch/utils.py sha256=eZb5rOlr_R3B-8LbQygY7_IC3ERuu3Pr7ZuPbQ3Y4QM 3947
scSLAT/model/preprocess.py sha256=FZgYfBhtqshE1E-0117Ukq4LC7NT9PKL6DlCbDvu6k0 3183
scSLAT/model/train.py sha256=-N5uPjBWhHYRcFcI57WygFHW-tzYPcpA3SfQ6euiQvg 5109
scSLAT/model/utils.py sha256=DgMYI9Ynp95A0GWMzZy7fun91qNSCc40WeT2M3Td4G0 12513
scSLAT/utils.py sha256=CxmsIP0dqEEOWAEqXm6HXF6W1UWdiz1V0QwPwO9ov9g 2792
scSLAT/viz/__init__.py sha256=x0xJOlq1MUqJz1NhpW6cLN3JbzoLZnUiLiQXmrYEcyM 988
scSLAT/viz/color.py sha256=lfIJkuwgObz5cveUkG_nMyCMYZgJNhxOrIEcL8WLXds 3474
scSLAT/viz/multi_dataset.py sha256=dbMbTNt12z3VSKu-5c23It_YK_YlMik4Gw73Ln_fh1o 25075
scslat-0.2.1.dist-info/LICENSE sha256=b2jaBPOXpm05Tvj0Sxs8bd5aCtHEgaMN5EAahqh5RnA 1064
scslat-0.2.1.dist-info/METADATA sha256=pEbdVo_tSHLjR1IySeprZ3wnASVJd2sqE-f7baEdBjU 6693
scslat-0.2.1.dist-info/WHEEL sha256=7Z8_27uaHI_UZAc4Uox4PpBhQ9Y5_modZXWMxtUi4NU 88
scslat-0.2.1.dist-info/RECORD