Path |
Digest |
Size |
config/base.yml |
sha256=3AyrbWy82ZdD8y8sFSJGjSr2U7sQRkjLqNh0dNv7XGQ
|
2972 |
config/predict.yml |
sha256=_vdwp7Zyq98EP3GW0eXQrP4FRdtdwRPc9TuVKSngXL8
|
471 |
config/pretrain_large.yml |
sha256=NQ9snmQGPWt9RmFjY8muyJrqmDSHb8kW16vrcYL0358
|
158 |
config/pretrain_medium.yml |
sha256=hpg8FAaDgZxr2p_ZcCZfgKo3O8RkmNUeAn69UEUXz78
|
129 |
config/pretrain_small.yml |
sha256=SIpxSDD-IyIYGh_IRxEJkOZ_GiK0UDcOndtYexdw1yo
|
129 |
config/pretrain_vlarge.yml |
sha256=0YnOHmIPPiclk-ZT6jx6kJzTqyqgExNw_gLLfrgaWMc
|
348 |
config/pretrain_xlarge.yml |
sha256=U67o0auofsTYU8gZY8R5Xybj91UC-vi6PGcSM3q-qr0
|
1117 |
config/scgpt.yml |
sha256=kEFbXMWEYGi-ypVFUmHBgfQckFGJAFXquwGk49GmMck
|
3601 |
config/others/pretrain_MLM.yml |
sha256=SYS7rVU-1RhFn9Zk7aiOlefpFDgY1jqR7v4kRS4xNzM
|
3590 |
config/others/pretrain_denoise.yml |
sha256=7ThSuJnpZHy6nG5OsJm2fkIKrfkquYWg9_en5_8HveQ
|
3589 |
config/others/pretrain_mvc.yml |
sha256=9Qyxwd-22rTae9Kv6Cv9AtkkbiNl5Pp7fuFyW6Is2E4
|
3601 |
config/others/pretrain_onlydenoise.yml |
sha256=xD-XyVwUTKxuIb0eHoBWNnZHJxb3RI0LzmYO_dvGV-k
|
3456 |
config/others/pretrain_small_2000.yml |
sha256=kxMYqnayXSAWss76h42d_1xpUTWK3NMOOr42UM4kkbk
|
3750 |
config/others/pretrain_small_all.yml |
sha256=nT-DXXvPy2PDJxl_9KSvv_3NjhbNttaJDjbC9iMW-K0
|
3675 |
config/others/pretrain_small_noClass.yml |
sha256=fXh1-iUtwexEXaumKtQno18_h3sNhgxyvgg_h023Hi8
|
3680 |
config/others/pretrain_small_onlyDNS.yml |
sha256=yWitLPB1oMsYEbi1O-DtZ0eJiMYzYgGEVgVu-cIPDCc
|
1346 |
config/others/pretrain_small_onlyMLM.yml |
sha256=uC7gO7tVm9GFRMIgRVOI5K3lOwq7FhxrF92TIRUJf84
|
3667 |
scprint/VERSION |
sha256=1-dHLCYhhLoNpJuXwyP9qKDsvu4z17NNtIQF76_WVd4
|
6 |
scprint/__init__.py |
sha256=iwLQKikn1g2ADX3aI9T8Jr599V283ORtYjUAENOi6dE
|
306 |
scprint/__main__.py |
sha256=0qokyKzNVzWNOb2SMLvI5SI6xksIVuI2yzNZdB1OqlA
|
1571 |
scprint/base.py |
sha256=NRyrF3s_w5xNNs6uCV9MYHH8CPbUE8RVLNPIaMdskjY
|
323 |
scprint/cli.py |
sha256=7lXqbBaadiniCXKM76Ud4mx7QrUI5WIUHCibTKGAFxM
|
10555 |
scprint/explainer/__init__.py |
sha256=du4tEGvkbiMlQ_WezLUG5wtwl7l3DIZxBg_pzO1zX1U
|
51 |
scprint/model/__init__.py |
sha256=4RxYx0PdMSXwqF7ricAmZwa0cWsQcA65ntHxjRnLI-g
|
21 |
scprint/model/decoders.py |
sha256=ZWHHdeyiAcz9UTWD6r-HfL5pbJW8Kd7T6YrpPSGqt0I
|
8318 |
scprint/model/encoders.py |
sha256=Zbj3sXgU7VTY2ECtJGsjPX601jWPcouT8OKEFjOmJAA
|
8739 |
scprint/model/loss.py |
sha256=WivaLAOHVmhBk8ade8KHwwvvwmNqKybnwakUT3VZfa4
|
11884 |
scprint/model/model.py |
sha256=1tPAWQ5m_5inSN1GS6SmO68FBGdwTe-xKIco9jnV48s
|
58278 |
scprint/model/utils.py |
sha256=Brn0HzVWGVtmDPU16yygml_85eGqBYGppn8fx5bi6NQ
|
29997 |
scprint/model/flash_attn/__init__.py |
sha256=DYngA2nAXWeOmT_kkSDJNBDTzOhKLzMhUOXDAWQvDQs
|
86 |
scprint/model/flash_attn/activations.py |
sha256=0Dvq8PfT39IVlD2XudmS4VcJ8IWUuyLfbknOh6JEQp0
|
3937 |
scprint/model/flash_attn/block.py |
sha256=lYFMJLhPNwGr1p1OaPdT2Mz-2ByP-vMQl7Ydjk6PDVk
|
15550 |
scprint/model/flash_attn/flashattention.py |
sha256=j2c9gJkJqWqe4TdQ_91vPYHEUszjUpTeblIykPLqokQ
|
49572 |
scprint/model/flash_attn/flashformer.py |
sha256=ZIdHcsc0UKQEGg0QRlQP_EOuGP5JhjY0qkuu6ag5qrg
|
8885 |
scprint/model/flash_attn/layer_norm.py |
sha256=l9BzP8NGXgWTbq4LPmS6geGxKjOCWxCv66j6RRM65Go
|
38648 |
scprint/model/flash_attn/mha.py |
sha256=pNWtk7rLIVmBXvDaMW4VCTeeWPdUHHKvUuZJahIm7Ew
|
32055 |
scprint/model/flash_attn/mlp.py |
sha256=p99To2zhwVJAD0XKOaaL_cVSWs4BJZAEyz94grLFm-o
|
2852 |
scprint/tasks/__init__.py |
sha256=Tvma5_bljxot3TkJcO7aBhxFidQWEPfZayf_fqU7Zr4
|
66 |
scprint/tasks/cell_emb.py |
sha256=GpqqTZ-61x328Npwic8ANnqFwF8KvwZHswoEkFMrVrY
|
22605 |
scprint/tasks/denoise.py |
sha256=2HRmD9prt-bGovLE0Gqg4ReNktQuSNZS78hpwkGV50o
|
13671 |
scprint/tasks/grn.py |
sha256=9FvKB-Vwb861_cvcBHlInWoUiCKQRKKKrJSyB738rJc
|
31261 |
scprint/tasks/knn_smooth.py |
sha256=1STNuKem8vdtWedxk0OR2cINi8zWnEwxc9pMyMfnq_8
|
10408 |
scprint/tasks/tmfg.py |
sha256=Vgl8dkZVyHf3upu-LYf3BSHDqkPRZ2nbsFA7qQyVqX8
|
4064 |
scprint/tokenizers/__init__.py |
sha256=6ofva0ZdgNzybLVxcg0RYkfi_h41JjXzXZ4I4YL00Hw
|
128 |
scprint/tokenizers/embedder.py |
sha256=BdlHIe334aRYzv9272THblpLoRLHd9Dols2uESTbk5M
|
3238 |
scprint/tokenizers/protein_embedder.py |
sha256=4wm-rpqI5ZCYWaBZenGgX_zNQovIXxPEDAEYM4H0xL8
|
2729 |
scprint/trainer/__init__.py |
sha256=nOu2MUtdfpmSWWc7l-Gk5v9gS5JKzsicArMl8038IsU
|
23 |
scprint/trainer/trainer.py |
sha256=Y5f7AtZDYT0zdZYUZABp9lXxBgBVnUHOwu0K7pDbZiU
|
8346 |
scprint/utils/__init__.py |
sha256=D6HN4Q6NJ0YUMGFUdJpLl5YJDKA7Ge51x3pX0WUISbw
|
83 |
scprint/utils/get_seq.py |
sha256=-usONgOIKjW97SuKziBRhy1ZMLF1kxuqUFQc0dVAJKY
|
21569 |
scprint/utils/sinkhorn.py |
sha256=xY0ZeLVEPQAR9PWWktLY_1zwQHtOPjlbIUEaQ8jGHWU
|
3309 |
scprint/utils/utils.py |
sha256=7QyC8kkLuPeqHcFlOEGxlY5VOQVeEqNzEvzf8oK1Q_8
|
5943 |
slurm/submit_large.sh |
sha256=WkxArnxd0xgZqV7c6IzZFj_HWe1SlmgQm4QDb8bNjls
|
804 |
slurm/submit_medium.sh |
sha256=tEG9Pzk0fpFOi7_T-lxuGACpzVFkNz4g7R0xpjEr9Zs
|
858 |
scprint-1.6.4.dist-info/METADATA |
sha256=uwyTQ_j7J1eRVW5u7EB-TrqhrgUBrE1GkMeklC55yWk
|
18329 |
scprint-1.6.4.dist-info/WHEEL |
sha256=C2FUgwZgiLbznR-k0b_5k3Ai_1aASOXDss3lzCUsUug
|
87 |
scprint-1.6.4.dist-info/entry_points.txt |
sha256=MlwZHTfZ4LQ4JvJFobTYGMrv3uCY9xW3Eour8rLvVE4
|
50 |
scprint-1.6.4.dist-info/licenses/LICENSE |
sha256=qAl_x9jZlynu1XSNctMbF1KRCc50-XfHrD9i25BHVcQ
|
1104 |
scprint-1.6.4.dist-info/RECORD |
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