Reverse Dependencies of scirpy

The following projects have a declared dependency on scirpy:

• mist-vae — MIST: an interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis
• mvtcr — mvTCR: A multimodal generative model to learn a unified representation across TCR sequences and scRNAseq data for joint analysis of single-cell immune profiling data
• panpipes — Panpipes - multimodal single cell pipelines
• sc-dandelion — sc-TCR/BCR-seq analysis tool
• scAtlasVAE — scAtlasVAE: a deep learning framework for atlas-scale scRNA-seq integration and analysis