Reverse Dependencies of scib

The following projects have a declared dependency on scib:

• celldisect — Cell DISentangled Experts for Covariate counTerfactuals (CellDISECT). Causal generative model designed to disentangle known covariate variations from unknown ones at test time while simultaneously learning to make counterfactual predictions.
• helical — Helical Python SDK
• iVAE — Interpretable Variational Autoencoder for Single-Cell Data
• panpipes — Panpipes - multimodal single cell pipelines
• pydance — Deep Learning for Single-cell Analysis
• scgpt — Large-scale generative pretrain of single cell using transformer.
• scib-metrics — Accelerated and Python-only scIB metrics
• scPEFT — Harnessing the Power of Single Cell Large Language Models with Parameter Efficient Fine-Tuning.
• scprint — scPRINT is a Large Cell Model for Gene Network Inference, Denoising and more from scRNAseq data