scArches

View on PyPIReverse Dependencies (2)

0.6.1 scArches-0.6.1-py3-none-any.whl

Wheel Details

Project: scArches
Version: 0.6.1
Filename: scArches-0.6.1-py3-none-any.whl
Download: [link]
Size: 130165
MD5: c03f7bfb3c206b8f14c78fc899dc8998
SHA256: 90b4980db84ec2d6854dbc69076ea30283de3bed5ba5fb401a311d52cbdb6b75
Uploaded: 2024-02-29 23:10:13 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: scArches
Version: 0.6.1
Summary: Transfer learning with Architecture Surgery on Single-cell data
Home-Page: https://github.com/theislab/scarches
License: MIT
Classifier: Programming Language :: Python :: 3.9
Classifier: Environment :: Console
Classifier: Framework :: Jupyter
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Requires-Dist: scanpy (>=1.6.0)
Requires-Dist: anndata (>=0.7.4)
Requires-Dist: scHPL (>=1.0.0)
Requires-Dist: h5py (>=2.10.0)
Requires-Dist: torch (>=1.8.0)
Requires-Dist: numpy (>=1.19.2)
Requires-Dist: scipy (>=1.5.2)
Requires-Dist: scikit-learn (>=0.23.2)
Requires-Dist: matplotlib (>=3.3.1)
Requires-Dist: pandas (>=1.1.2)
Requires-Dist: scvi-tools (>=0.12.1)
Requires-Dist: tqdm (>=4.56.0)
Requires-Dist: requests
Requires-Dist: gdown
Requires-Dist: leidenalg
Requires-Dist: muon
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 2189 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.41.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
scarches/__init__.py sha256=XL4K4fuau23f7mTpMsEkgyGa6eM8vqcRE3njITQIBtM 376
scarches/classifiers/__init__.py sha256=ojtrxgUWiyS-UMuxdn-cZW8iCsGRt4Z0rL_5qHgYmOc 12
scarches/dataset/__init__.py sha256=x07BbMiFRLqvmQ1turbnyU_SEB27vGgdZ5MGXKDnKso 564
scarches/dataset/DHH_data/_DHH_data.py sha256=JRoJ-Y7f-N2wRBuaxSM1XLG7zKTjkjElwZ4X9G5Ag5k 6372
scarches/dataset/DHH_data/__init__.py sha256=ZkS820Z5JBNn9Piv18CxG00gR8VlFlsxRTpVENkrPO0 29
scarches/dataset/MGA_data/_MGA_data.py sha256=4TQVVPq-ARCcCjjOrW0lY9_W2Q6iLTyJw4TPHXvbmpc 1502
scarches/dataset/MGA_data/__init__.py sha256=w6QT71tprK2ndU_bEJmYUu7KhSVryZl9cWrRnIEF9Kg 105
scarches/dataset/scpoli/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/dataset/scpoli/_utils.py sha256=NNMRTTUkdUJ7eR5jF7AUKwvD_xmYeFcn9RUqzDkL-MI 2028
scarches/dataset/scpoli/anndata.py sha256=_J2Xxs3EY-tetEKu6qj6f5rzkXGUN3NrtzSFlt4Sums 4750
scarches/dataset/trvae/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/dataset/trvae/_utils.py sha256=Tp5OgCmpiLvYE5K4IwFWIoYLLLIvQX3ir5mrBNBffvs 1396
scarches/dataset/trvae/anndata.py sha256=uqPX65sV8I8IjXiJFX4PiG-g8_rSz6B1yVH2bObsekc 4130
scarches/dataset/trvae/data_handling.py sha256=3BUIE8bEy_NXZzOKkLrOmFcotwcbr5mVuZcmWr-EeOQ 597
scarches/metrics/__init__.py sha256=PvAYasGHhwv7XtzuaYkmpZngBXU5N6b7donOd5FkGFo 63
scarches/metrics/clustering.py sha256=dc4JzLiSfks1wcyjPDuLT8pMJ2-h2OFbafUXpP5vMFY 3135
scarches/metrics/metrics.py sha256=vXEUeHwP9Xc4CApgQjm2RWpJbpmwVdcGpQBhLXzKFhI 8783
scarches/models/__init__.py sha256=yeBXXYEap_4mNXuNN9brChSh3TmmfHn_ObJlE19eH3k 1086
scarches/models/base/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/models/base/_base.py sha256=05XrlLnlmr2pbPb1G7PT3i9ExYG-698BxMVSRgRQkUM 17292
scarches/models/base/_utils.py sha256=bh4pXtdDBKzS1eMnWTIp5DSuHQhhGRy6AnZLy9ARt_0 2990
scarches/models/expimap/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/models/expimap/expimap.py sha256=qqR-zzbqgxzinaMPPz-mu5VEoJmdZ3I_BOVRwsC2XmQ 9426
scarches/models/expimap/expimap_model.py sha256=Okir5ckMZ9-atCRcYkmUnNlTwmm8LOWMzdMvhRiTQ8c 28168
scarches/models/expimap/losses.py sha256=3TWgW7D_U5wTwtii0Yk4zS6Y9CrEzMlAns9dN_rTWOs 997
scarches/models/expimap/modules.py sha256=CD67Bzh0aSVzirHho2zCGawH6HsXALmfvIh1F39cPH4 8199
scarches/models/sagenet/__init__.py sha256=7MLV5TObkMyoHShB0FykOtaH0tGNj-n9eUf-GXChKdQ 163
scarches/models/sagenet/classifier.py sha256=lBLynNtTWtccxu0s3dQQoQUaREUbMHyDp4kYVA2ZpU8 12089
scarches/models/sagenet/model.py sha256=b64n9I8-ein4TH_SS1Y31E-rfpJNFmMgP_Mx3n_uAa0 9408
scarches/models/sagenet/sagenet.py sha256=YUGrX3wOAlyyKynNgt-KU08AGzmy5J62WacS2xgzkTA 9501
scarches/models/sagenet/utils.py sha256=8EPYzhuEDVdHUdwOaOvtF9BAq4w4ENji_uxh-ETXa80 7629
scarches/models/scgen/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/models/scgen/_utils.py sha256=sUpsyHN6Oh7Tpkv7y4F_tmDBWmbNklgv6APM__QpoTM 2788
scarches/models/scgen/modules.py sha256=W-Jr4NdJYQcrofYXdgbQ5UCrRqYVlyCFwcSCrv6jSuI 5087
scarches/models/scgen/vaearith.py sha256=BeKEOs0Hq7-GeHR-gD9Wn0e1F5elro_Geasl2-jb6l8 14588
scarches/models/scgen/vaearith_model.py sha256=UkVMK8q57xb6JAdYB-oL2kKIwEAmypzG_-_8GIgm7lo 9345
scarches/models/scpoli/__init__.py sha256=l3VeHhoQ0bJ2GhAVRZBo6Nh9HTXhLhR-lLHZYGpualU 350
scarches/models/scpoli/_utils.py sha256=dIZJb3nsT2sr0QAw05r7GIut2JrOVOpqhNGpHYlOldU 1830
scarches/models/scpoli/scpoli.py sha256=Onp_Hgj_tBket6eynq_3_uHHXqHJRzk1P_Au3xT3twA 25274
scarches/models/scpoli/scpoli_model.py sha256=6Af67w5kQ8mqZN2SPvukmHfQ5BTB_RW3krNJRIrRHq0 39323
scarches/models/trvae/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/models/trvae/_utils.py sha256=q8UDYYh3zk4ezDwHpIcn_F35XzE6P76KkinBW15GG7E 637
scarches/models/trvae/adaptors.py sha256=8Lf3EA2p5Oa1lnlvcgZVTVMRGHg6h9rZe43BtrciR3w 6120
scarches/models/trvae/losses.py sha256=y6yKTlk86XMF1hnRuDJB9yciDviVMugYBkRoQrEC-C0 9088
scarches/models/trvae/modules.py sha256=_rW2ELUCEDwjTBLkTXuAvAYuxAYp09vKpqSGHxNq3UQ 9310
scarches/models/trvae/trvae.py sha256=-G85QgJ-ZMTvOXfzSUnHA3CebABdgXMQ9F44-zoM590 6899
scarches/models/trvae/trvae_model.py sha256=RNSAoJJkJnwANQC_psU-jQata6kHm5m-k7VOfKS9fVw 5713
scarches/plotting/__init__.py sha256=5CEWiR3v_uVPYV2Fl2QiNbPajSfoyWqJb3l_HXYthE0 221
scarches/plotting/_alluvial.py sha256=edFD8kfZzqW8jeMckGhbzw0c2Ot-nPSfdZzjgFfyreo 11198
scarches/plotting/sankey.py sha256=3CvDICR9tuECuU0DDdN7GSHJYq2eYXLl4ygs9jKArdw 1983
scarches/plotting/scvi_eval.py sha256=S722Ppq1naECof8roiG1wb-e1ymxAYCG4PGndlnFX4A 13119
scarches/plotting/terms_scores.py sha256=JK_xUJog-eESZrazvXZu5EELdKtXfdBiKCsJevtHQSk 2451
scarches/plotting/trvae_eval.py sha256=7KIIWCrer5VvJrw3JoRGUX0MiRgGGinLG3symAgbVCc 5508
scarches/surgery/__init__.py sha256=OGsw_JsLhi4P23UimEP42xPlHlqb0XeZE5o-IrhzbUE 34
scarches/surgery/trvae.py sha256=jPdRWPZlbTkaiKydcUiTbnAuFAHACLno2MI2csBAL18 4599
scarches/trainers/__init__.py sha256=bWke-3ZueBaAlzHH22qHFwxfpfKhUTR5zWG4XFFfX18 182
scarches/trainers/expimap/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/trainers/expimap/regularized.py sha256=SFmyrZ803jqTa0kWVz3kuBExatRU0svHtA_tJvz6upE 16062
scarches/trainers/scgen/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/trainers/scgen/_utils.py sha256=tCjefQaaeZkkScMdqBClDFdeJBVyXnMTt9boY_iHBFs 8413
scarches/trainers/scgen/trainer.py sha256=b_jX4xwMBl-NZe-LQRgATYGzwlRSdP6PVdKKnPyP6DY 8861
scarches/trainers/scpoli/__init__.py sha256=p3ONiWhKSvX2OZK9-AIpTtBdypHs33EddpakcGFQmqQ 350
scarches/trainers/scpoli/_utils.py sha256=t8S7CBdmIzRnnCH-f3zW-UUvWDRIiyZPZIIYAyUUFMk 11195
scarches/trainers/scpoli/trainer.py sha256=8PB3JdGdge6hL5AtZ8-jdd1GjIziU5wOhwLz17ulZIg 34652
scarches/trainers/trvae/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
scarches/trainers/trvae/_utils.py sha256=Jlc9CHhWSgKVBlnGz62EFbgQ93Q4uZOE0fXOhWd2flo 9065
scarches/trainers/trvae/trainer.py sha256=srGM9WH7fh7PTYHeYGE8beA8rU9IdfRXhGlD1Hery9g 13449
scarches/trainers/trvae/unsupervised.py sha256=f5PhKVscD_56-SPxG7Qia_XN1ofd4aFP_-15vJdobxw 3598
scarches/utils/__init__.py sha256=H7QAsumqZXpvNpmYpWELbQZ_NlAzoiBCIdssECpiDTQ 185
scarches/utils/annotations.py sha256=dDKOjc6x4s_LOjj8wuv7Xad0ED_iKWfoWzxhVJwwCRk 2266
scarches/utils/knn.py sha256=4niDYVM_lVm7OQtbongA_Qvq-YbCWjxnI4LMvtNnE74 5357
scarches/utils/monitor.py sha256=uisMsDdh77d40E7z8WA73H39eccvf3JJVVB0UAiG0ew 4441
scarches/zenodo/__init__.py sha256=6iIJWBgt5qL3uDXw35A333aqR6OhqqdktMA_JH5UIpE 3018
scarches/zenodo/deposition.py sha256=f09SL5TOgGMJK4vm8xr380JO2_B7Z2lC9KA7FFAzvDs 4452
scarches/zenodo/file.py sha256=3w6GOC0e2u8_yMIkRIKRzFkJm2OXVAdFQmURBUzsIOI 2874
scarches/zenodo/zip.py sha256=Vghk6zf7HB0lAGpea40nsfNPJjoMZ2_lak0VrtYrc4E 548
scArches-0.6.1.dist-info/LICENSE sha256=Pedp37WaQ--UScBuMAD6Ox7XI8qwaHZigr-SQ-fAOMU 1566
scArches-0.6.1.dist-info/METADATA sha256=kAEYKEomCl4A3jnV1QFKGNeoel9dXlPCfCJcZq79yTE 3464
scArches-0.6.1.dist-info/WHEEL sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A 92
scArches-0.6.1.dist-info/top_level.txt sha256=zkVR2p1WinZ3jI-68X_MckHVxPVJtouL3VLGYRYXXis 9
scArches-0.6.1.dist-info/RECORD

top_level.txt

scarches