Reverse Dependencies of scanpydoc

The following projects have a declared dependency on scanpydoc:

• anndata — Annotated data.
• anndata2ri — no summary
• annsel — A Narwhals powered DataFrame-style selection, filtering and indexing operations on AnnData Objects.
• astrohack — Holography Antenna Commissioning Kit
• astroviper — Astro Visibility and Image Parallel Execution Reduction
• auror — Parameter Checking
• constclust — no summary
• cpa-tools — Compositional Perturbation Autoencoder (CPA)
• CytoSimplex — Simplex Visualization of Cell Fate Similarity in Single-Cell Data
• graphviper — Visibility and Image Parallel Execution Reduction for Radio Astronomy
• greatpy — Implementation of GREAT in Python
• lantsa — Landmark-based transferable subspace analysis for single-cell and spatial transcriptomics
• menrva — Generalized Dask Client for GraphViper Framework
• metricq — A highly-scalable, distributed metric data processing framework based on RabbitMQ
• mubind — ML for biomolecular binding
• multigrate — Multigrate: multimodal data integration for single-cell genomics.
• napari-spatialdata — Interactive visualization of spatial omics data with napari
• oqs-licensing — Licensing module of Orange Quantum Systems
• quantify-core — Quantify-core is a unified quantum computing, solid-state and pulse sequencing physical experimentation framework.
• quantify-scheduler — Quantify-scheduler is a Python package for writing quantum programs featuring a hybrid gate-pulse control model with explicit timing control.
• rapids-singlecell — running single cell analysis on Nvidia GPUs
• scanpy — Single-Cell Analysis in Python.
• scgen — ScGen - Predicting single cell perturbations.
• scib-metrics — Accelerated and Python-only scIB metrics
• scvi — Single-cell Variational Inference
• sirius — Simulation of Radio Interferometry from Unique Sources
• sklearn-ann — Various integrations for ANN (Approximate Nearest Neighbours) libraries into scikit-learn.
• skriba — Messaging and logger module for astroVIPER, Dask based ecosystem.
• spagtl — Spatially aligned Graph Transfer Learning
• spametric — Metric learning for Spatial transcriptomics
• sparcl — Relational Contrastive Learning for Spatial Transcriptomics
• spasrl — Spatially aware self-representation learning
• spateo-release — Spateo: multidimensional spatiotemporal modeling of single-cell spatial transcriptomics
• superexacttestpy — Python implementation of the SuperExactTest algorithm
• toolviper — no summary
• velovi — Estimation of RNA velocity with variational inference.
• VirtualFleet — ``Virtual Fleet`` is a Python package to compute and analyse simulations of virtual Argo float trajectories.
• visionpy-sc — Signature Analysis and Visualization for Single-Cell RNA-seq
• wax-ml — A Python library for machine-learning and feedback loops on streaming data
• xradio — Xarray Radio Astronomy Data IO