Reverse Dependencies of scanorama

The following projects have a declared dependency on scanorama:

• besca — Collection of BEDA internal python functions for analysing single cell RNAseq data.
• biotranslator — BioTranslator: Cross-modal Translation for Zero-shot Biomedical Classification
• genomap — Genomap converts tabular gene expression data into spatially meaningful images.
• mazebox — A suite of tools for analyzing single-cell transcriptomics data
• ngs-toolkit — A toolkit for NGS analysis with Python.
• OnClass — Single Cell Annotation based on the Cell Ontology
• panpipes — Panpipes - multimodal single cell pipelines
• pegasuspy — Pegasus is a Python package for analyzing sc/snRNA-seq data of millions of cells
• popari — Popari: a probabilistic graphical model for integrated spatial transcriptomics analysis
• popv — Consensus prediction of cell type labels with popV
• scab — Single cell analysis of B cells
• scanpy — Single-Cell Analysis in Python.
• scanpy-recipe — shortcut tools for scRNA-seq data analysis based on scanpy
• scib — Evaluating single-cell data integration methods
• scib-metrics — Accelerated and Python-only scIB metrics
• stereoAlign — A toolkit package of data integration
• STpipe-sc — STpipe is designed to analyze spatial transcriptomic data.