Reverse Dependencies of roifile

The following projects have a declared dependency on roifile:

• acia — The acia library provides utility functionality for analyzing 2D+t time-lapse image sequences in microfluidic live-cell imaging experiments.
• batoolset — An aggregate of functions I find useful
• Cellamander — A package for combining Cellpose gradients for cell phenotyping
• cellphe — CellPhe: Toolkit for cell phenotyping from time-lapse videos
• cellpose — anatomical segmentation algorithm
• cellpose-plus — cell segmenetation framework based on cellpose
• cellsium — CellSium – Cell Simulator for microfluidic microcolonies
• cgohlke — Install all packages by cgohlke
• deepd3 — A tool for segmenting dendrites and dendritic spines.
• dextrusion — DeXtrusion: automatic detection of cell extrusion in epithelial tissu
• epicure — Napari plugin to manually correct epithelia segmentation in movies
• epyseg — A deep learning based tool to segment epithelial tissues. The epyseg GUI can be uesd to build, train or run custom networks
• findmycells — An end-to-end bioimage analysis pipeline with state-of-the-art tools for non-coding experts
• impy-array — Speed up coding/extending image analysis in Python.
• napari-annotatorj — The napari adaptation of the ImageJ/Fiji plugin AnnotatorJ for easy image annotation.
• napari-bacseg — Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.
• napari-filaments — A napari plugin for filament analysis
• neura-library — Utility tools for system neuroscience research, including Open Source Wrapper or Parser
• neuralactivitycubic — Computation of local and signal-close-to-noise calcium activity
• neuroimage_denoiser — no summary
• numena — Image Processing and Analysis toolbox package
• polony — no summary
• pyfigures — PyFigures will assist you assemble publication ready scientific figures in no time.
• tifffile — Read and write TIFF files
• tllab-common — Common code for the Lenstra lab.