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RiboCode

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1.2.15 RiboCode-1.2.15-py2.py3-none-any.whl

Wheel Details

Project: RiboCode
Version: 1.2.15
Filename: RiboCode-1.2.15-py2.py3-none-any.whl
Download: [link]
Size: 35077
MD5: 2b8d092b4b9f0589b7e79be3da463efb
SHA256: 590d2b047fdbb819a5004adeaeb3212cbe60f65622486fb0880ac14c3c0071f5
Uploaded: 2022-07-29 01:41:27 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: RiboCode
Version: 1.2.15
Summary: A package for identifying the translated ORFs using ribosome-profiling data
Author: Zhengtao Xiao
Author-Email: xzt13[at]tsinghua.org.cn
Home-Page: https://github.com/xryanglab/RiboCode
Project-Url: Documentation, https://github.com/xryanglab/RiboCode/blob/master/README.rst
Project-Url: Source, https://github.com/xryanglab/RiboCode
Project-Url: ChangeLog, https://github.com/xryanglab/RiboCode/blob/master/ChangeLog.rst
Project-Url: Issues, https://github.com/xryanglab/RiboCode/issues
License: MIT
Keywords: ribo-seq ribosome-profiling ORF
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Environment :: Console
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Requires-Dist: pysam (>0.8.4)
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: pyfasta
Requires-Dist: biopython
Requires-Dist: h5py (>3.0.0)
Requires-Dist: htseq
Requires-Dist: future
Requires-Dist: statsmodels
Requires-Dist: minepy
License-File: LICENSE
[Description omitted; length: 139 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.0)
Root-Is-Purelib: true
Tag: py2-none-any
Tag: py3-none-any

RECORD

Path Digest Size
RiboCode/GTF_update.py sha256=pqX9syippp74Q_0jtsUigULPi1rYXUFZEJ54pgyfym8 4086
RiboCode/RPF_count_ORF.py sha256=Hk4L9jk2kIbidofEc6CG4ByqAnShA09PUq8C4nKYRcE 4586
RiboCode/RiboCode.py sha256=on9MojXsY3N38JqoBFrts5s04DnxB66jV7heUniVCMQ 2529
RiboCode/RiboCode_onestep.py sha256=v0Q2IGpZqrIcXP7oX5pbkHoKDxz-cWghOl3QEqKddn8 3227
RiboCode/__init__.py sha256=GNIo4wru-vvLG911g0JkmKvu7SKNqIx4qmDShssOA-k 97
RiboCode/detectORF.py sha256=xcLDVdN6qaKpP9kC5DfWgx2e2yMFVMGIuvlyuFa-F5E 19698
RiboCode/loadconfig.py sha256=IpAooojfyIxvQM4zZdFhu-70OkntLLVXlG7yA1K8P2k 2323
RiboCode/metaplots.py sha256=XRjZzx0T9PCVU28Lnb7QiK54fYNuAxGT09XtqiPjDjg 9685
RiboCode/orf_finder.py sha256=swwBG47lULqLBqPBTd_Dsg1SV2dUrBZqWQWGy1KA0f4 2039
RiboCode/parsing_opts.py sha256=E31VMqgmdwWgAoWpCPgkTU7OOMlftAxjPgBinK7sFec 21456
RiboCode/pie_plot.py sha256=2fAsh77Lld0sNGxTtX-5XLfaU1fl8rkReN04uUXXA7o 1315
RiboCode/plot_orf_density.py sha256=WKFI2728J5PGHy5yKiK0NwjoTUi9D4SZl27ARd__P5Y 4759
RiboCode/prepare_transcripts.py sha256=F9IX4jsE1breGC3hLq3_Pu72B4xhhwQy8AdXRWgpgTc 12713
RiboCode/process_bam.py sha256=rn2Sd2Vyx6-nLxLzQP9Hf5FXYIDbHIltpRiTwJluzi0 4267
RiboCode/test_func.py sha256=qGRYBtWyZm-3J2jDwmsTdAAhgUPtl0Zl-I0yg-8-AZg 4838
RiboCode/translate_dna.py sha256=Cj4upakHVE6RZI9psijX9-LyE517HFd94P6k3CkgOqs 598
RiboCode-1.2.15.dist-info/LICENSE sha256=Sy4kKzJVVIOzyJ29rRK23Jp5aiUAvDwq5P13v3nxnz4 1075
RiboCode-1.2.15.dist-info/METADATA sha256=gfQwjO3yC3UiH-sZXLsyhdiPQD0F3YEzHCvDNnmbMHQ 1349
RiboCode-1.2.15.dist-info/WHEEL sha256=WzZ8cwjh8l0jtULNjYq1Hpr-WCqCRgPr--TX4P5I1Wo 110
RiboCode-1.2.15.dist-info/entry_points.txt sha256=JFTg-NGK4QCOxlZHLMwhr536h1RH3OoPqXtf8lfPL44 321
RiboCode-1.2.15.dist-info/top_level.txt sha256=0uAClbh01BNVdDeaQoN-VnyP_Tr1jy3AOKmPhay6Pto 9
RiboCode-1.2.15.dist-info/RECORD — —

top_level.txt

RiboCode

entry_points.txt

[console_scripts]
GTFupdate = RiboCode.GTF_update:main
ORFcount = RiboCode.RPF_count_ORF:main
RiboCode = RiboCode.RiboCode:main
RiboCode_onestep = RiboCode.RiboCode_onestep:main
metaplots = RiboCode.metaplots:main
plot_orf_density = RiboCode.plot_orf_density:main
prepare_transcripts = RiboCode.prepare_transcripts:main