relion

View on PyPIReverse Dependencies (0)

0.13.16 relion-0.13.16-py3-none-any.whl

Wheel Details

Project: relion
Version: 0.13.16
Filename: relion-0.13.16-py3-none-any.whl
Download: [link]
Size: 219397
MD5: 421c8d943b4249a5ca1946da29390ee1
SHA256: 4f2343387bfa7c55ade0716eed9c7525d064d738a7f8ee3dd7157f2a3b0b2275
Uploaded: 2024-02-09 16:54:13 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: relion
Version: 0.13.16
Summary: Relion Python API
Author: Diamond Light Source - Scientific Software et al.
Author-Email: scientificsoftware[at]diamond.ac.uk
Project-Url: Documentation, https://python-relion.readthedocs.io/
Project-Url: GitHub, https://github.com/DiamondLightSource/python-relion
Project-Url: Bug-Tracker, https://github.com/DiamondLightSource/python-relion/issues
License: GPLv2
Keywords: relion
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License v2 (GPLv2)
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.8
Requires-Dist: gemmi
Requires-Dist: htcondor
Requires-Dist: importlib-metadata
Requires-Dist: ispyb
Requires-Dist: marshmallow-sqlalchemy
Requires-Dist: matplotlib
Requires-Dist: mrcfile
Requires-Dist: numpy
Requires-Dist: opencv-python-headless
Requires-Dist: pandas
Requires-Dist: pillow
Requires-Dist: plotly
Requires-Dist: pydantic (==1.10.7)
Requires-Dist: pyyaml
Requires-Dist: starfile
Requires-Dist: workflows
Requires-Dist: zocalo
License-File: LICENSE
[Description omitted; length: 1445 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.42.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
relion/__init__.py sha256=3VPjwgMiv23aBKyBLT_hJzSVYypjay788ydD-H3PUEc 14413
relion/parse_project.py sha256=JNup6AZaoxNeFmRWDqpkI3ItHk2JkqxiLB9mdnOy0-s 4468
relion/_parser/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
relion/_parser/autopick.py sha256=CAkpDvRudFIh_zpv5fUgMk7_nNo-AeaCOIHIymsfJDA 5669
relion/_parser/class2D.py sha256=ICrmdtp-12yzuCyOpdiOQZjlvmG2Ba5Rsrbi2R2L0sw 8636
relion/_parser/class3D.py sha256=uqWuiwS2Fwboi4UiGqSJYSwFwqXY2qJHbcdLwmGhUFw 10540
relion/_parser/combine_star_files.py sha256=YqqJ8b1mP5fWGDWyRfpOlzdRCBWfsoCilLyvv4_0qs8 8911
relion/_parser/combine_star_job.py sha256=aFaqX59erdZvjaA4hG_pXSuP59CUJ6IJZU2KQA6JT0E 6164
relion/_parser/cryolo.py sha256=xDnGfRJ5G2u1NJJsvIGxRN20C2yewcpBoYXlaFeIp1g 7957
relion/_parser/ctffind.py sha256=ngyibIY2bHWXkLbhFXkE5_32UKY1r5PjdgwLnZ31uhY 4768
relion/_parser/initialmodel.py sha256=-K3vSJBlX4Y43lb4c6KP3cRezqrsuFhKT465qwAs0yw 2616
relion/_parser/jobtype.py sha256=suE3jOSI5pzDYMwAtJDjdrdlmIHn8AIU4LiwyPhNAY0 3244
relion/_parser/motioncorrection.py sha256=vIgyJa_WkbTqYMGhTVNVlZbZq4GCLBmrEYjTKaYojkw 7392
relion/_parser/processgraph.py sha256=juU_2fMy4uxcqy7mgi3Fy1sXwaqOcoQ9jcmtCU92kHI 4668
relion/_parser/processnode.py sha256=XdmgIJ68YSlEpkJpRDzIDfvAq306SZscMSQHrdb0I4g 2729
relion/_parser/relativeicethickness.py sha256=IzNg4r6rHHmFAJyX6oHxK1JlIi5nJ-59n213vtK7k5Y 3617
relion/_parser/relion_pipeline.py sha256=_xhIvHnzVxfB7_jIis1oiZPHSL2_hbr5hwYHBqKHPQA 24144
relion/_parser/select.py sha256=Wgx1jBt1-KNRye2xPuq_Hg-CvLXu8RlneGDGE8uUi_U 3049
relion/cli/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
relion/cli/current_job.py sha256=-HwPpDA-GVUTMJDyq5xhFCgUqjV8RZCKneEf9q-xX7I 989
relion/cli/pipeline_viewer.py sha256=43V5i9KuVgcwVlAbCoA9WMKpQi19Q6dobQhG601QCdk 744
relion/cli/print_default_options.py sha256=uiHWPrR6V-XevHNKPPHU_OgaQzKNrUg49d-M-L9sO30 1490
relion/cli/project_linker.py sha256=iY09jJwHN5vzFg56LmSxEU1J0RGEPCJ2qSA9vSAgGl8 3449
relion/cli/refine_pipeline.py sha256=QgavN2VfWZR_AeDXG399UL-XyMtW_ROgMJRpFdmEzog 2188
relion/cli/run_pipeline.py sha256=9Lb9QL-OOkhUEaT_rNlBLJ5vv9Nai0kXeY-ZylAkgBk 4138
relion/cryolo_relion_it/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
relion/cryolo_relion_it/cryolo_external_job.py sha256=jyEsWBkYyFwJAHpMlYtyOnvj2ycG-msPKwwuU9HBeeg 8574
relion/cryolo_relion_it/cryolo_fine_tune_job.py sha256=umOgFuRVAX7SqLYwoxHXF45QuxFdlfmrRYIi04AVhSs 7699
relion/cryolo_relion_it/cryolo_relion_it.py sha256=rQvQVss7xE_BwPC2N10TaYVO13GnPyE8gUu15447oy8 170893
relion/cryolo_relion_it/dls_options.py sha256=PPN13RK5KUZaaLgnLa9CGkMOYbUoKyz33jWuyS5MIe0 2710
relion/cryolo_relion_it/fsc_fitting_external_job.py sha256=xfM8VVht4ycS97ra-mJfGRcdrALAKlYRo6Lfz-1c6Tk 3389
relion/cryolo_relion_it/icebreaker_histogram.py sha256=IhmGF7iGVh3xJIGUbHAixlVf8g5CxZKL2LEYrwEKtw4 3509
relion/cryolo_relion_it/mask_soft_edge_external_job.py sha256=qkX5-IsHluBtAOg499fysLbEqpc_X6OoGvAUWOpDyX4 2498
relion/cryolo_relion_it/reconstruct_halves_external_job.py sha256=so84OSmamJhsdF9DK7dYfmGp50VIU-6g-vVlLWqlHhY 4045
relion/cryolo_relion_it/select_and_split_external_job.py sha256=o1IIC51izlOpX47tL8sNu7QbKIFv5c-DFht1jgfPx3A 3106
relion/dbmodel/__init__.py sha256=9I0XMlsTiQk0tggbwJd_fZTQWkzrq4hfv4zmhwqYIjg 5315
relion/dbmodel/dbgraph.py sha256=LKIQQ5WI6KowVz12Vj0V-8GGKgulCs3WvfNmR7c61DU 1440
relion/dbmodel/dbnode.py sha256=Z5V48yMoqr9Bg3sDcV2xMAzMfO9Plr6akOSHNvUOf0c 7739
relion/dbmodel/modeltables.py sha256=LDkpFymP5LtDD4S9AkD-H8buCXyJQDc5PWBhwanfPrA 13321
relion/node/__init__.py sha256=3xJTZuyztQ01GFlAq_vMHUEMPzdaE4sxKqg-wY3-fx8 5425
relion/node/environment.py sha256=BWSMRSjMkO8XX6Ya4OME1QBFp7Id8UMIolkcmAUFdUA 5583
relion/node/graph.py sha256=OVX5QAEdmiR8pHpRY7e2iEU6u__UkQB1peSFnJET75I 8536
relion/pipeline/__init__.py sha256=QFKQ67jY_kLsn7IDTJrfYubqIYVLSd_DwaqnfKCKXhw 63227
relion/pipeline/extra_options.py sha256=wxQJIq87k5MC7IEAAtFNEg2aq_7lr_0WlNW2DL70P1Y 3754
relion/pipeline/options.py sha256=7wipmGBwnhPml2c2dsVXttXFJ3sYm3KBFArK7jyWkck 10242
relion/pipeline/refine.py sha256=rz9mKG_OarnCEVYBbk65q7GqSzmaTNJqgaVRyxET0sw 4724
relion/zocalo/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
relion/zocalo/alchemy.py sha256=qpvq3xp6ic3RqxnwVfa4yo_ANj0sEUanLj3EO03Jlzg 3130
relion/zocalo/class2d_wrapper.py sha256=4K8sKYJo_mCHbVo3bmyAIJY58gh0U3FJS1Kld-WTsMY 14545
relion/zocalo/class3d_wrapper.py sha256=OGsAPLFAeuH8NY4icDuNOCR8XYfepCwWF06UDKUAgzE 20737
relion/zocalo/cluster_submission.py sha256=wLNce4kgCq7K-imlAI7ZKBbPCVfKjDk83Yl3kAAoINc 15939
relion/zocalo/cryolo.py sha256=eHvvShq7jfmSfono1Rc6i9jY-nXxioy9PFUT24cCInM 14480
relion/zocalo/ctffind.py sha256=3d3MgqChCDPJKu6pxiTLv7USek3I3yAV8HPeQys2S3c 12403
relion/zocalo/denoise.py sha256=iKzAwY1_h-323Ipp2rBbPPAZxMy1VKOQMo0B4xEcVfM 11840
relion/zocalo/extract.py sha256=zROj9yu7VWGJpfEQg8DjeHK8on24qlN9XHKF0ex5TuU 17097
relion/zocalo/icebreaker.py sha256=IlpDFXUvYUdEcMIvnbgGihgD3-c2UhaOBlltwdqRCzI 14564
relion/zocalo/images.py sha256=CHs5A4-pbLYbpo5lkGbD4-NjWW3kJXL7OECqZ9_zqIw 7058
relion/zocalo/images_service_plugin.py sha256=pH3fkyXK-07mwqX6NBQBaeMEZFYubqpQzP74-POMyPY 9885
relion/zocalo/ispyb_buffer.py sha256=ZsISpiVZg0Ya8cufKj4x3AXRR_VlcoclZcgKWl7lQ9E 3588
relion/zocalo/ispyb_recipe_tools.py sha256=r59toI3i_x-4KJ42woQLDuekKOMKxw-P4QeqTjGcOSQ 7995
relion/zocalo/ispyb_service.py sha256=2jdwzKOTr_XpvTFMGnl9Yv2i6E91u576L96wNATgYy4 48039
relion/zocalo/motioncorr.py sha256=iYrkcltlfjYDooFMm3a1SwTBguxkRineQVQYHmLZ8Eg 25405
relion/zocalo/motioncorr_wilson.py sha256=FjoagxCgmInwNbQGPpSfiRJ-WZAT39rmQEVvOpszX5s 9851
relion/zocalo/node_creator.py sha256=XZda7zLyfD6qBlcNnP7Z3XJR0N5L-h_2Wl3tWyIWGAY 13912
relion/zocalo/select_classes.py sha256=mqVNZAbNjmX53qzRU0a6iYRrrt798ciJc5ReJKNO-2k 21080
relion/zocalo/select_particles.py sha256=VLfNON2PLfs_P7e-kM0dJ14F0vfpN3bEtFpsTqxsuPU 12000
relion/zocalo/service.py sha256=q-GXdDMOYgsgN9FQEQE1yywPqvpdYKCJq2sroH3Q-QI 1992
relion/zocalo/spa_output_files.py sha256=iDIwE3cMnsmEF9L_yQ2QRX7t8dYCnMjLbtHzd6yJjas 12330
relion/zocalo/spa_relion_service_options.py sha256=w5bGPHmXaz298OmaebQACDoFteF3lP4NwIdc1OoaFYg 9644
relion/zocalo/tomo_align.py sha256=tAlIHZWaDFE8M5Dy5RmkjOdMX3TS2tGBag-pFtaN_Pg 21844
relion/zocalo/tomo_align_iris.py sha256=JJI8MsH4x6pt91WpvqzQuHSHrHFQmB46LZcp0GnUlb4 8311
relion/zocalo/wrapper.py sha256=x6OSZ_6gP29TM4msEiUa7X0hsEn4Hoe8uyiflh44SMQ 33786
relion-0.13.16.dist-info/LICENSE sha256=0zI1zp8mUOOBedUhOibRHOSyOWH6ss8a6KBJwcJNXKs 17222
relion-0.13.16.dist-info/METADATA sha256=NBul9Abe2jDlSWdeG46RokaYgG2Q2S-8L7OYi-58MKE 2773
relion-0.13.16.dist-info/WHEEL sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM 92
relion-0.13.16.dist-info/entry_points.txt sha256=KC6vIQoj0Fyz5S5NriqBU53Nqd8nVCajpQ3j0uEQPrY 2767
relion-0.13.16.dist-info/top_level.txt sha256=7pRb9A8EcFx2an8OF8cqS2YZzPVJkJzkkE554hx9CPo 7
relion-0.13.16.dist-info/RECORD

top_level.txt

relion

entry_points.txt

combine_star_files_job = relion._parser.combine_star_job:ProcessStarFiles
combine_star_files = relion._parser.combine_star_files:main
external_job_cryolo = relion.cryolo_relion_it.cryolo_external_job:main
external_job_cryolo_fine_tune = relion.cryolo_relion_it.cryolo_fine_tune_job:main
external_job_fsc_fitting = relion.cryolo_relion_it.fsc_fitting_external_job:main
external_job_mask_soft_edge = relion.cryolo_relion_it.mask_soft_edge_external_job:main
external_job_reconstruct_halves = relion.cryolo_relion_it.reconstruct_halves_external_job:main
external_job_select_and_split = relion.cryolo_relion_it.select_and_split_external_job:main
relipy.job = relion.cli.current_job:run
relipy.link = relion.cli.project_linker:run
relipy.print_options = relion.cli.print_default_options:run
relipy.run_pipeline = relion.cli.run_pipeline:run
relipy.run_refine_pipeline = relion.cli.refine_pipeline:run
relipy.show = relion.cli.pipeline_viewer:run
relion = relion
CTFFind = relion.zocalo.ctffind:CTFFind
ClusterSubmission = relion.zocalo.cluster_submission:ClusterSubmission
CrYOLO = relion.zocalo.cryolo:CrYOLO
Denoise = relion.zocalo.denoise:Denoise
Extract = relion.zocalo.extract:Extract
ISPyB = relion.zocalo.ispyb_service:EMISPyB
IceBreaker = relion.zocalo.icebreaker:IceBreaker
Images = relion.zocalo.images:Images
MotionCor = relion.zocalo.motioncorr:MotionCorr
MotionCorWilson = relion.zocalo.motioncorr_wilson:MotionCorrWilson
NodeCreator = relion.zocalo.node_creator:NodeCreator
RelionStopService = relion.zocalo.service:RelionStopService
SelectClasses = relion.zocalo.select_classes:SelectClasses
SelectParticles = relion.zocalo.select_particles:SelectParticles
TomoAlign = relion.zocalo.tomo_align:TomoAlign
TomoAlignIris = relion.zocalo.tomo_align_iris:TomoAlignIris
grid_engine = relion.zocalo.cluster_submission:submit_to_grid_engine
htcondor = relion.zocalo.cluster_submission:submit_to_htcondor
slurm = relion.zocalo.cluster_submission:submit_to_slurm
ispyb = relion.zocalo.ispyb_recipe_tools:ispyb_filter
ispyb = relion.zocalo.ispyb_recipe_tools:ready_for_processing
mrc_central_slice = relion.zocalo.images_service_plugin:mrc_central_slice
mrc_to_apng = relion.zocalo.images_service_plugin:mrc_to_apng
mrc_to_jpeg = relion.zocalo.images_service_plugin:mrc_to_jpeg
picked_particles = relion.zocalo.images_service_plugin:picked_particles
Class2D = relion.zocalo.class2d_wrapper:Class2DWrapper
Class3D = relion.zocalo.class3d_wrapper:Class3DWrapper
relion = relion.zocalo.wrapper:RelionWrapper