Wheelodex » Projects » rbapy » rbapy-2.0.1-py2.py3-none-any.whl

rbapy

View on PyPI — Reverse Dependencies (2)

2.0.1 rbapy-2.0.1-py2.py3-none-any.whl

Wheel Details

Project: rbapy
Version: 2.0.1
Filename: rbapy-2.0.1-py2.py3-none-any.whl
Download: [link]
Size: 96519
MD5: 31b4e93ea1171bb200de87e6621f05f9
SHA256: b27a6b88cd40de536b15801c5dec0fc9f8da3eeda90ff8f117eb17f4002d149e
Uploaded: 2023-06-05 14:39:55 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: rbapy
Version: 2.0.1
Summary: Package for automated generation of bacterial Resource Balance Analysis (RBA) models and simulation of RBA models
Author: RBApy was conceived and implemented originally by INRAE (Stephan Fischer, Ana Bulovic, Anne Goelzer and Marc Dinh), and updated regularly by several contributors (Oliver Bodeit, Jonathan Karr, Michael Jahn)
Author-Email: anne.goelzer[at]inra.fr
Home-Page: https://sysbioinra.github.io/RBApy/
License: GPLv3
Keywords: metabolism,Resource Balance Analysis,molecular biology,cell biology,biochemistry,systems biology,computational biology,mathematical modeling,numerical simulation
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.5
Requires-Dist: biopython
Requires-Dist: lxml
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: python-libsbml
Requires-Dist: scipy
Requires-Dist: requests
Requires-Dist: cplex; extra == "cplex"
Requires-Dist: conv-opt[cplex]; extra == "cplex_conv_opt"
Requires-Dist: optlang; extra == "cplex_optlang"
Requires-Dist: cplex; extra == "cplex_optlang"
Requires-Dist: check-manifest; extra == "dev"
Requires-Dist: glpk; extra == "glpk"
Requires-Dist: conv-opt; extra == "glpk_conv_opt"
Requires-Dist: optlang; extra == "glpk_optlang"
Requires-Dist: gurobipy; extra == "gurobi"
Requires-Dist: conv-opt[gurobi]; extra == "gurobi_conv_opt"
Requires-Dist: optlang; extra == "gurobi_optlang"
Requires-Dist: gurobipy; extra == "gurobi_optlang"
Requires-Dist: swiglpk; extra == "swiglpk"
Requires-Dist: pytest; extra == "test"
Requires-Dist: pytest-cov; extra == "test"
Requires-Dist: coverage; extra == "test"
Provides-Extra: cplex
Provides-Extra: cplex_conv_opt
Provides-Extra: cplex_optlang
Provides-Extra: dev
Provides-Extra: glpk
Provides-Extra: glpk_conv_opt
Provides-Extra: glpk_optlang
Provides-Extra: gurobi
Provides-Extra: gurobi_conv_opt
Provides-Extra: gurobi_optlang
Provides-Extra: swiglpk
Provides-Extra: test
License-File: LICENSE.txt
[Description omitted; length: 5369 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py2-none-any
Tag: py3-none-any

RECORD

Path Digest Size
rba/__init__.py sha256=t4F1hOMPbCqpJKWvUFBA3CYMqDm2uk-Cao9_kL-nGuU 587
rba/_authors.py sha256=FYH8UdGf82MpNOe7GgiuLxxMyZyiG-Q_b8rMOJpVCJY 209
rba/_version.py sha256=HVx0XJJ9OYFWBBPBCUFYb8Nm43ChPg9GZLh_dkxh9qI 22
rba/model.py sha256=iGmRRCcqv_sDEty131U-bPvyQTWG6bnWxofhXps9eT0 7646
rba/cli/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
rba/cli/generate_rba_model.py sha256=TTfHH1oYlcuv83X0sM6C2lmGIcfQgM18J1NLVACOHPQ 1022
rba/cli/solve_rba_model.py sha256=CnTauxHuDFzVu65tg7sZnMliajs2_Yl7gROAZ9obnW4 2491
rba/core/__init__.py sha256=WoIDAacyLVcZkEOXESir15SvQR7RyGmQxI9Nz5tT8Qs 174
rba/core/constraint_blocks.py sha256=p4S9Q4cQzRsHxX4-Og3Ckb0eb-kPzdbrgdFtM3WEago 3101
rba/core/constraint_matrix.py sha256=grU1rZr4hhzKDikE78Viuqy2rHL08p5AFMtJCiYyrOQ 7923
rba/core/density.py sha256=1bm4YWs-bdTXW8WTQrL9AHXIoDP3h9Z5GvWqnheq3_c 2214
rba/core/enzymes.py sha256=j40qMKoifilrTsMsrcBryXRooxCM1TqX8UzYWKri810 2833
rba/core/functions.py sha256=vtVzwUGthxdu8ChbLyc7irSG6xOjHc4Dm60SmN_kS2A 10899
rba/core/metabolism.py sha256=A_r3VyFHdO-jTJ_A5s4_28jOZjSHVNwxP9JDLp1OzjA 5411
rba/core/parameter_vector.py sha256=540fOL_u7GsHldPYL1APH5uvYcFtI0iM-rm6CHmjc2Q 984
rba/core/parameters.py sha256=2iSd_qbdjX902cHlJkQoPT8riU2xpuF0CWthFBuRqwc 2960
rba/core/processes.py sha256=eDwGY1hO_fa1CPpNgpBSaZEsT_y0pyo6opTS1sH-fFU 2380
rba/core/solver.py sha256=WqpHjqPJ7y1GYjD5CMsh2rGXqTHG6HrY_BCOH9eJjnI 38261
rba/core/species.py sha256=-ZPQAFkCHbokzB69ZjPW64v6sf_KbV7jGW4PjHEw7YQ 14046
rba/core/targets.py sha256=aAv74eWxeH2LlBhbiug6FL5CPD1LQqC1gOKvx9_a-AE 11309
rba/prerba/__init__.py sha256=4QSGiKafP84yQCrehMds977wNyuudxNp8eNokVb3DZg 147
rba/prerba/curation_data.py sha256=epA4Q1gvOZDUJH79lvY5jfEkJHDuRV6fmnTarpk7FCY 3356
rba/prerba/default_data.py sha256=aow4gBJJQqgS812zLJ3GbqtNxjtKOj8DGsiJ5K_OLwE 13233
rba/prerba/default_processes.py sha256=P5rRgFE1NJ-YPc224GXFj8FleFW41wnN5UMO8spV4PM 9871
rba/prerba/default_targets.py sha256=s6kFodjX53c5RDXDEpN6RJbwdLiGwstYyDIY8R0TEAU 4925
rba/prerba/enzyme.py sha256=a5Yx3iSarMW0MNr7uciGRs4bWdBsil6bdFwWO9ZtPWQ 990
rba/prerba/fasta_parser.py sha256=c3ONL7tXuJbfNJo-B7uxefU1TQCIL-Uyvd-oANZdVHU 3718
rba/prerba/macromolecule.py sha256=qm4BSd5nXCSTSoFUMOkBAAfsMUt9VMu36qqGnY7COC4 1926
rba/prerba/manual_annotation.py sha256=eq2QN8ou5yCtfwfiXkA8OOOuaQJMjlIe-RreQZ_sjUk 8370
rba/prerba/model_builder.py sha256=Jsu6ZtBBUV3fLSTDsLlEycaq_3iYzyrLvMP4CJEEoZo 13855
rba/prerba/pipeline_parameters.py sha256=lfECwJEPQA5bJDXPQFlpPT9burPClAsBxZIgYQYPCQA 2392
rba/prerba/protein_data.py sha256=jhu-MNrEcxiChYvu5v8BsHcV_1r7y6JJJvYuTP0BT-8 8427
rba/prerba/protein_export.py sha256=0xCn5Ud5CBx2uWpsfj2K_-MNcf4KLQWAjcwIjvVggzU 901
rba/prerba/sbml_data.py sha256=PpsBFeRmUKF1XLRXNK6e1tl2kxcPbHJwEuvcj2Yhz5A 11897
rba/prerba/uniprot_data.py sha256=DYMfX1p5nJABTutlwZdL3BgP0kClBmZAPxMrdDAPTd0 10499
rba/prerba/uniprot_importer.py sha256=1lcGvL5-xn9l5MG5gd6Wp6mxuo0FzyzJXBoZoCL_Tmo 4463
rba/prerba/user_data.py sha256=zeaqT8v9_O6jJpi5Uif_jfEt7wRmx1njwvrrzjVeOH0 8354
rba/prerba/user_machinery.py sha256=t1aQEHvV9qT1c4wXkcxsU7TpVNDGV97T98e6IIsJIGI 675
rba/utils/__init__.py sha256=5XQ7TcolvpP3tX7hYwbFLQsMQGqRn11_T2AtutD245Y 104
rba/utils/efficiencies.py sha256=-a_2mjbkr9YkyAkCLCKdVBWrqjquFQv5J-qu2ruRnlA 7807
rba/utils/results.py sha256=Ct5KX4dqfRBrlAK7UpqgxOiDtjTC9RssX6nP2TMgFzQ 9724
rba/xml/__init__.py sha256=k8LfMDuMLwWWL3Mg3f7M8nWWNtIslwb-LfKk1DC8-v0 573
rba/xml/common.py sha256=hqTRGLozVhGja1Hk-hCsgzzuGR4Rx0xKTJSaCpA0MdA 8072
rba/xml/density.py sha256=B5vJj1RTWy_RSTh2OEwVHR8FoSAlAqA8FK1NmTK4zpQ 2655
rba/xml/enzymes.py sha256=qTIIya5A9bqEw8kvTpbO8JNiE2AEI970SNzOGBKGcSA 4220
rba/xml/macromolecules.py sha256=Hz_nXw3CpOMpuipzr7BMZirZy2D-0XnxZpVBTj7vq9w 6557
rba/xml/metabolism.py sha256=StXHY0YA4XHE4cuR6LE-1DYIEN9C-DfcC0Gig-Crsqs 6041
rba/xml/parameters.py sha256=H4rjGdffaP31I8PwhiA1J2BuIxsQuULmXpiSgPf1L9w 7669
rba/xml/processes.py sha256=F_w0qRYLHPyu2BpuPk4lXoDFocFNX9dyT2qUstTCu5Y 13880
rba/xml/targets.py sha256=r2ymuDWKY1Hq1WTQieiGtTw8J4rEOtKC59vV4B18iGI 11610
rbapy-2.0.1.dist-info/LICENSE.txt sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM 35147
rbapy-2.0.1.dist-info/METADATA sha256=WcEs79BoJ6DxQnKfYRHida2vcNTOYB0kSekKrogUKSU 7800
rbapy-2.0.1.dist-info/WHEEL sha256=z9j0xAa_JmUKMpmz72K0ZGALSM_n-wQVmGbleXx2VHg 110
rbapy-2.0.1.dist-info/entry_points.txt sha256=hqyLuKb_UT5Dv4itRKooUxK3xpFGkTL03LJgIVS7MT4 119
rbapy-2.0.1.dist-info/top_level.txt sha256=XSVSb8A_nqOr4kMrd9__qaxd7Db0kQ86IVFIbGxmSxw 4
rbapy-2.0.1.dist-info/RECORD — —

top_level.txt

rba

entry_points.txt

[console_scripts]
generate-rba-model = rba.cli.generate_rba_model:main
solve-rba-model = rba.cli.solve_rba_model:main