Reverse Dependencies of PyVCF3

The following projects have a declared dependency on PyVCF3:

• bio-wrangler — A bioinformatics data wrangling package for FASTA, FASTQ, VCF, and GFF files.
• biometrics — Package to generate sample based biometrics.
• biomojify — Convert FASTQ and FASTA files to emoji.
• cgap-higlass-data — Data file generation for CGAP's Higlass browsers
• cuteFC — Regenotyping structural variants through an accurate and efficient force-calling method
• cutevariant — GUI to visualize and process variant data
• epytope — A Framework for Epitope Detection and Vaccine Design
• genelastic — Generate and store genetic data into an Elasticsearch database.
• haploblock-shuffler — Create all possible combinations of phased and unphased blocks in a vcf
• hl7v2GenomicsExtractor — Convert vcf/xml files to HL7V2 message
• howard-ann — HOWARD - Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery
• pacu-snp — Workflow for whole genome sequencing based phylogeny of Illumina and ONT data.
• postprocessing-variant-calls — This hosts multiple scripts necessary for filtering and processing of variant calls in the vcfs/txt file generated by callers.
• primervcf — primer design for haplotype genotyping using indel information
• querynator — Python package to query cancer variant databases
• snputils — Process diverse genomes with ease
• svbench — no summary
• ToolBiox — a biological toolkit for genome assembly, annotation and analysis that we have accumulated from our bioinformatics work
• varcode — Variant annotation in Python
• vcf2fhir — Convert .vcf files to HL7 FHIR standard
• vcftoolz — Tools for working with Variant Call Format files.