Reverse Dependencies of pytabix

The following projects have a declared dependency on pytabix:

• CoverageCalculatorPy — Calculated coverage metrics from a GATK3 Depth Of Coverage file and a bedfile
• cwas — Category-wide association study (CWAS). This is a data analytic tool to perform stringent association tests to find non-coding loci associated with autism spectrum disorder (ASD).
• filter_variants — Filter variants based on frequencies
• Galaxy-ML — Galaxy Machine Learning Library
• genmod — Annotate genetic inheritance models in variant files
• granite-suite — granite is a collection of software to call, filter and work with genomic variants.
• himut — himut: single molecule somatic single-base substitution detection using PacBio CCS reads
• HiNT-Package — HiNT -- HiC for copy number vairations and translocations detection
• mutanno — Mutation Annotation Tool
• nanome-jax — NANOME (Nanopore methylation) pipeline developed by Li Lab at The Jackson Laboratory
• nanomethphase — Phase long reads from Oxford Nanopore Technologies based on their methylated profile.
• ngsderive — Forensic analysis tool useful in backwards computing information from next-generation sequencing data.
• polygenic — Polygenic score toolkit
• smunger — munger for GWAS summary statistics.
• Truvari — Structural variant comparison tool for VCFs
• ukbsearch — no summary