Reverse Dependencies of pystow

The following projects have a declared dependency on pystow:

• apicuron-client — A client for interacting with APICURON
• autoreviewer — Automate scientific software review
• bio2bel — A framework for converting biological data sources to BEL
• biomappings — Curated and predicted mappings between biomedical identifiers in different namespaces
• bioontologies — Tools for biomedical ontologies
• bioregistry — Integrated registry of biological databases and nomenclatures
• biotools-client — An API client to bio.tools
• bioversions — What's the current version for each biological database?
• chembl-downloader — Reproducibly download, open, parse, and query ChEMBL
• citation-url — Parse URLs for DOIs, PubMed identifiers, PMC identifiers, arXiv identifiers, etc.
• compath-resources — ComPath Resource Utilities
• decimer — DECIMER 2.6.0: Deep Learning for Chemical Image Recognition using Efficient-Net V2 + Transformer
• depmap-downloader — Reproducibly/automatically download data from the DepMap.
• drexml — (DRExM³L) Drug REpurposing using and eXplainable Machine Learning and Mechanistic Models of signal transduction"
• drugbank-downloader — A tool for reproducibly downloading and extracting DrugBank data
• fairsharing-client — A client to the FAIRsharing API
• forayer — First aid utilies for knowledge graph exploration with an entity centric approach
• geneplexus — Network based gene classification
• gilda — Grounding for biomedical entities with contextual disambiguation
• gptchem — Use GPT-3 to solve chemistry problems
• linkml-store — linkml-store
• llm-change-agent — llm-change-agent
• matbench-genmetrics — Generative materials benchmarking metrics, inspired by CDVAE.
• mcodegpt — mCodeGPT
• mcodegpthippa — mcodegpthippa
• mofdscribe — Ecosystem for digital reticular chemistry
• mold2-pywrapper — Python wrapper for Mold2 descriptors
• monarch-py — Python package for interacting with Monarch Initiative knowledge graph
• moviegraphbenchmark — Benchmark datasets for Entity Resolution on Knowledge Graphs containing information about movies, tv shows and persons from IMDB,TMDB and TheTVDB
• oaklib — Ontology Access Kit: Python library for common ontology operations over a variety of backends
• ols-client — A client to the EBI Ontology Lookup Service
• ontoportal-client — A client to BioPortal and other OntoPortal instances.
• orcid-downloader — Download and process ORCID in bulk
• papyrus-scripts — A collection of scripts to handle the Papyrus bioactivity dataset
• protmapper — Map protein sites to human reference sequence.
• pura — Clean chemical data quickly
• pybel — Parsing, validation, compilation, and data exchange of Biological Expression Language (BEL)
• pydeogram — Generate karyotype pictures using Ideogram.js.
• pykeen — A package for training and evaluating multimodal knowledge graph embeddings
• pyobo — Handling and writing OBO
• quickstatements-client — A data model and client for Wikidata QuickStatements
• semra — Semantic mapping reasoner and assembler
• spectacular-analysis — Bayesian logistic regression modeling
• stonkgs — Sophisticated Transformers for Biomedical Text and Knowledge Graph Data
• STOUT-pypi — STOUT V2.0 - Smiles TO iUpac Translator Version 2.0
• sylloge — Small library to simplify collecting and loading of entity alignment benchmark datasets
• synspace — Generative model based on forward synthesis rules
• umls-downloader — Automate downloading UMLS data.
• useful-rdkit-utils — A collection of useful RDKit functions
• xtal2txt — Package to encode and decode crystal structures into text representations
• zenodo-client — A wrapper for the Zenodo API.