Reverse Dependencies of pynwb

The following projects have a declared dependency on pynwb:

• nwbext-ecog — Convert data to nwb
• nwbext-simulation-output — Extension for storing large-scale simulation output in the Neurodata Without Borders: Neurophysiology format
• nwbinspector — Tool to inspect NWB files for best practices compliance.
• nwbmatic — NWB creator from various data streams
• nwbwidgets — This is nwbwidgets, widgets for viewing the contents of a NWB-file in Jupyter Notebooks using ipywidgets.
• Patchview — Patchview perform data analysis and visualization on whole-cell recording data, including firing pattern analysis, event analysis, synatpic connection detection, morphorlocial analysis and more.
• photon-flux-estimation — Library to compute estimated photon flux from multiphoton imaging data
• physion — Vision Physiology Software
• population-analysis — Analysis code for a papers population analysis
• process-nwb — ECoG preprocessing scripts for NWB files.
• pynapple — PYthon Neural Analysis Package Pour Laboratoires d’Excellence
• roiextractors — Python module for extracting optical physiology ROIs and traces for various file types and formats
• RutishauserLabtoNWB — Export and Analysis Code for NWB:N
• segmentationextractors — Python module for extracting optical physiology ROIs and traces for various file types and formats
• silverlabnwb — Python tools for working with Silver Lab data in the NWB2 format
• simply-nwb — Common NWB use cases and simplified interface for common usage
• simuran — Simultaneous Multi-region Analysis supported with a network style
• sleap — SLEAP (Social LEAP Estimates Animal Poses) is a deep learning framework for animal pose tracking.
• sleap-io — Standalone utilities for working with pose data from SLEAP and other tools.
• spikeextractors — Python module for extracting recorded and spike sorted extracellular data from different file types and formats
• spikeinterface — Python toolkit for analysis, visualization, and comparison of spike sorting output
• spyglass-neuro — Neuroscience data analysis framework for reproducible research
• suite2p — Pipeline for calcium imaging
• suite2p-haisslab — Pipeline for calcium imaging
• tank-lab-to-nwb — NWB conversion scripts and tutorials.
• tolias-lab-to-nwb — tool to convert Tolias Lab matlab intracellular electrophysiology data into NWB:N format
• trodes-to-nwb — A python package to convert SpikeGadgets data to NWB
• vame-py — Variational Animal Motion Embedding.
• visiomode — An open-source platform for touchscreen-based visuomotor tasks in rodents.
• x-to-nwb — Convert various patch-clamp data formats to NWBv2