pymob

View on PyPIReverse Dependencies (0)

0.4.1 pymob-0.4.1-py3-none-any.whl

Wheel Details

Project: pymob
Version: 0.4.1
Filename: pymob-0.4.1-py3-none-any.whl
Download: [link]
Size: 84866
MD5: af1d2894484db76385da17fddd146a7e
SHA256: 8f3cba8b059bef4ce37d19cdde82624371b4131c89edbb536e034eea54fd4a07
Uploaded: 2024-07-03 23:08:51 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: pymob
Version: 0.4.1
Summary: Modelling platform for Python
Author-Email: Florian Schunck <fluncki[at]protonmail.com>
Project-Url: Homepage, https://github.com/flo-schu/pymob
Project-Url: Issue Tracker, https://github.com/flo-schu/pymob/issues
License: MIT License Copyright (c) 2023 Florian Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python :: 3
Classifier: Natural Language :: English
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.10
Requires-Dist: arviz (~=0.15.1)
Requires-Dist: click (~=8.1.3)
Requires-Dist: dpath (~=2.1.6)
Requires-Dist: matplotlib (~=3.7.1)
Requires-Dist: numpy (~=1.24.0)
Requires-Dist: pandas (~=2.0.2)
Requires-Dist: prettytable (~=3.7.0)
Requires-Dist: scipy (~=1.10.1)
Requires-Dist: scikit-learn (~=1.2.2)
Requires-Dist: tqdm (~=4.65.0)
Requires-Dist: toopy (==0.6.0)
Requires-Dist: xarray (~=2023.11.0)
Requires-Dist: sympy (~=1.12)
Requires-Dist: pydantic (~=2.5.2)
Requires-Dist: pytest (>=7.3); extra == "dev"
Requires-Dist: pyinstrument (>=4.5); extra == "dev"
Requires-Dist: bumpver; extra == "dev"
Requires-Dist: sphinx; extra == "dev"
Requires-Dist: myst-parser; extra == "dev"
Requires-Dist: sphinx-book-theme; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: ipywidgets (~=8.1.1); extra == "interactive"
Requires-Dist: IPython (~=8.17.2); extra == "interactive"
Requires-Dist: jax (==0.4.21); extra == "numpyro"
Requires-Dist: jaxlib (==0.4.21); extra == "numpyro"
Requires-Dist: sympy (==1.12); extra == "numpyro"
Requires-Dist: sympy2jax (==0.0.5); extra == "numpyro"
Requires-Dist: numpyro (==0.13.2); extra == "numpyro"
Requires-Dist: diffrax (==0.4.1); extra == "numpyro"
Requires-Dist: graphviz; extra == "numpyro"
Requires-Dist: pyabc (~=0.12.3); extra == "pyabc"
Requires-Dist: pathos (~=0.3.1); extra == "pyabc"
Requires-Dist: pymoo (~=0.6.0); extra == "pymoo"
Requires-Dist: pathos (~=0.3.1); extra == "pymoo"
Provides-Extra: dev
Provides-Extra: interactive
Provides-Extra: numpyro
Provides-Extra: pyabc
Provides-Extra: pymoo
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 4362 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (70.2.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
pymob/__init__.py sha256=VyttpX2VX58Q6Kou7sE2ilrHEflECzMya_w2D6eGBcw 156
pymob/__main__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
pymob/infer.py sha256=z8DQ41xV66J0Bm6tDMOb-tDnDzUqVtmfTgsjK8UCFRA 2028
pymob/prior_predictive_checks.py sha256=F7XNyuPUoNmITYmr8PlxQSLA7akx_EKbVtvZd6JC2nk 5248
pymob/simulate.py sha256=WVCjx_vlxJDKVNUNoZLPJo79WLkpQAp4hKFP7N27l3k 1405
pymob/simulation.py sha256=jXaG0DwixNYJDD4XHid0NcPJphPn6QMFrs5S1dgw_oo 44447
pymob/inference/__init__.py sha256=I3Nosa_fI3GoseQO-uSgaEDxFjjCEtpcy31A26IgiLQ 437
pymob/inference/analysis.py sha256=5TeEuvTmzo7KuCsUfLK9VY-MvkwPce38FjyXtOs1UN4 13111
pymob/inference/interactive.py sha256=aWFKhPsmwN27KINS0QVnxO0BBHjPACbpWf4zFpvrcZk 14171
pymob/inference/numpyro_backend.py sha256=6vh3hH3D5tqarys7fUGVlAgtM87N2Dm7fDskDDCQEHw 47658
pymob/inference/optimization.py sha256=9tE5VBpFAd-d6d2uXawqszV40LfKIS09OmQdEJIkuIo 11871
pymob/inference/pyabc_backend.py sha256=X7jL4k-13KLW5am57OiJCFW2OTmidSPlRbX4lLSn8PE 16588
pymob/inference/pymoo_backend.py sha256=2vFLi1TWeD4-Vw_33AqSlhrd1KXypVlIbGoqgqN1ZoA 7917
pymob/inference/sbi/plot_posterior_predictions.py sha256=pzOOuyv9yeH7tg2FatSu5s2E8CF8C5k6rjcEN0xIP4A 1866
pymob/inference/sbi/posterior_predictions.py sha256=3nRlT7RvEoYbxxG5CAw1xs6mwedDyHaf_UdiIdvKXq0 3160
pymob/inference/sbi/process_simulations.py sha256=L7ob4trBIv3DUZ0y3XDh-E_Rrh2ZhFgkoV9da0fIzJU 2023
pymob/inference/sbi/sbi_backend.py sha256=oN6SjQ0650fNrPeBJPYSmVA1f0eHTSyczDLTgdXdUZw 4475
pymob/inference/sbi/sbi_snle_sample_posterior.py sha256=1goIlHnkb8eq_kkDX0NZtD6GDoan4QbRYNYA-GGBoZw 1953
pymob/inference/sbi/sbi_utils.py sha256=seA_lswIY_Y8_bp3UzxJrVQPVn9Om2Hdx3sREiNb7ac 1214
pymob/inference/sbi/train_network.py sha256=xS-buhOXaLgsp603rIEwi3G6EhgCYC5-VC5dir16ZDU 4094
pymob/sim/__init__.py sha256=MIZFic5yAdXmiv_IDkKiVLbiByXSMPVFlud62GwtMjs 88
pymob/sim/base.py sha256=Vhok4HQNisAqB3J9oxxJzeCOoNJgN_CNFe8lcwKMY4c 3434
pymob/sim/config.py sha256=2gL5Tg8ywhpHcNIArSqaBC6mJN7S4_AsMeAESJ-cUmo 25978
pymob/sim/evaluator.py sha256=wFq_XAPTOcXH5ZhZz7NpsngWmP6EJwX5N0o4BA9siTg 7441
pymob/sim/solvetools.py sha256=mN1yhMJhL38RQVil0dfI-EDW0J_RFB_jEg91-QCgRQE 5859
pymob/utils/__init__.py sha256=Jomg6qkxh0lrpe4sCq-SU7YuaxGHsgNSXZMz-jv8W5g 87
pymob/utils/bayesian.py sha256=RgYW3HcRpLzEUQ9YXySL9oAyVxZoD4vO6okpXYarb3c 1013
pymob/utils/config.py sha256=dno69yDEMFQbHEmCnGmXKM12sbBxQQd0fcQ5zpLk2dA 2187
pymob/utils/errors.py sha256=SZ53JqkvM1CQx1s-wocQZzUyyrjbKF7dc8nRJ6RJ5Aw 3090
pymob/utils/help.py sha256=UkBdu8AE7bVkeWQtmjYxiNzU5d38d7CCvZ4f8FbNCS4 526
pymob/utils/math_helpers.py sha256=VBhnZBQNCIB0jc7wO0TsTZWzu5gh-qm196hgfojyJM8 516
pymob/utils/misc.py sha256=B_3fzXxBFyVzTIGqYpXfjpSkkKe1etwo2xWiAdOqaT4 4970
pymob/utils/plot_helpers.py sha256=WzbhjvO5d8NooH5taQ6j6H2DLs_l8WjXoxDAmiVyZCo 3688
pymob/utils/store_file.py sha256=pJKYIV0finYHbJD0YUPkVsUeqQaFq2iMlB4Uj6P6XOQ 14013
pymob-0.4.1.dist-info/LICENSE sha256=YzvyGPUFd2h-J7E-eOvUqhOhbcNY4tun_zNl3y_aUYw 1064
pymob-0.4.1.dist-info/METADATA sha256=qRNgmSrTPOOZF_kcNLEZLmFTDlAaSzsJT-6kduzioTk 7806
pymob-0.4.1.dist-info/WHEEL sha256=y4mX-SOX4fYIkonsAGA5N0Oy-8_gI4FXw5HNI1xqvWg 91
pymob-0.4.1.dist-info/entry_points.txt sha256=AUPx8ZiPBvoV4Hmaelo93yOsEcYhTwPfhBas_8CnCbU 86
pymob-0.4.1.dist-info/top_level.txt sha256=_PNgXQ73P0rUhIXDT3chxwy3SDNF7njZU1j0AegOCF0 6
pymob-0.4.1.dist-info/RECORD

top_level.txt

pymob

entry_points.txt

pymob-infer = pymob:infer.main
pymob-simulate = pymob:simulate.main