Reverse Dependencies of pyfasta

The following projects have a declared dependency on pyfasta:

• alphaquant — An open-source Python package of the AlphaPept ecosystem
• bamsnap — A converter from .bam to .png for specific genomic region.
• circFL-deep — circFL-deep: a tool for full-length circRNA isoform construction based on convolutional neural network
• circFL-refine — circFL-refine: a tool for full-length circRNA isoform construction based on convolutional neural network
• circfull — circfull: a tool to detect and quantify full-length circRNA isoforms from circFL-seq
• ogtk — General tools for genomics and lineage tracing
• RiboCode — A package for identifying the translated ORFs using ribosome-profiling data
• RNA-APoGee — A package for aligning RNA-seq data without reference biases
• smashbenchmarking — Check the accuracy of one VCF callset against another