Path |
Digest |
Size |
pgpipe/__init__.py |
sha256=0_7kR02-UdnP0hvyEAEFl7M8c6JVIOmSctolSDEXQY4
|
945 |
pgpipe/admixture.py |
sha256=CP3B8k9Xcblutg2rZGrJrXORxuHCiorHTLzQJIHdniI
|
13609 |
pgpipe/argparse_sets.py |
sha256=lkXQp7evfpu_3AuN6tQpsbT2_F47a5oRgGPamcI1FXs
|
729 |
pgpipe/bcftools.py |
sha256=jBs2oMuy_SR7zWkDUGw_PKJkz1uxzfB01W4o8_Mpryo
|
31084 |
pgpipe/beagle.py |
sha256=DgSAdZy-tz5KAS8mBJpb16mfH3rnSJ8sjYl3ifVwQaU
|
6001 |
pgpipe/bed_invert.py |
sha256=_pyPufES4qkRr5auNZEnyojAJwcNOMjpkl1Ab8GpKbk
|
5911 |
pgpipe/bed_utilities.py |
sha256=Bf8GtOQ6MZ6m5J2trGmYOvq6mf_EEGnTMj8QI8qa2Pg
|
23692 |
pgpipe/bedtools_wrapper.py |
sha256=aMKPXb4Vx9ghBHGtUchPLAvYjfftnDAiUbNqV0ql-8c
|
4947 |
pgpipe/eigenstrat_fstats.py |
sha256=n6Jau-fOfpzHWTmespw4p19XClqmitKRhHQK7ZfOzJo
|
26122 |
pgpipe/eigenstrat_wrapper.py |
sha256=l3BNBvtLVoinA4wLN6r1526ylaxAvNehmuMAMz6neas
|
17156 |
pgpipe/extend_loci.py |
sha256=AakIke1V9dXfBp0wAZJwasaBRzMqDokxrqgxBq16-ek
|
1456 |
pgpipe/fasta.py |
sha256=rIj1ydMX7PDgAoV-YTOn70lOEn5IfREjxLns84wmv9c
|
1278 |
pgpipe/fasta_utilities.py |
sha256=wZzUrFAH1XzVFpJbZi4ORBFllaHo9BIWTa4dE4aZmqg
|
3943 |
pgpipe/filter_single_vcf.py |
sha256=_7YbYp7KHTiaJtYOy7h57xxIfCwlZmuDzJiKyLe39_o
|
2041 |
pgpipe/genome_region.py |
sha256=iIzosljw5HtUl2PwskV_r5ttyUljQxw-LqC3xs1m7Hc
|
17421 |
pgpipe/get_nonmissing_chunks.py |
sha256=d_-OC1_uw2-gVELBmCPt27owB_DKHVdp2sN1ttC217E
|
8699 |
pgpipe/graph_plotter.py |
sha256=8F8wOzS2OldMCljEImbvHBM9vEIsZvYzv7Rcl5gAIDI
|
4811 |
pgpipe/ima3_wrapper.py |
sha256=eRR-N1bo-UPUWLBI5HweQQvvmT-ecTMdhM2Mm6jVMco
|
7695 |
pgpipe/ima_priors.py |
sha256=pj9V0WVjoQk2xS88gm-ggJZ0640w6p-j1aQYNm38wzs
|
2267 |
pgpipe/ima_to_treemix.py |
sha256=h9Uls6Z6z7G-Mbd3RNCNDtGQJ2Wt_UdlSAisgP9RslY
|
3286 |
pgpipe/informative_loci_filter.py |
sha256=ZN056IzAcrqdkfsi4yG-8tSu0v1NFGd2nHmblSjjBMU
|
11797 |
pgpipe/logging_module.py |
sha256=tkeOMuUwb400NOgbyGEloQIYMU931VmxWXXke30Mop0
|
3655 |
pgpipe/min_pop_filter.py |
sha256=DmNzlFlTEiWH12p61JiqGuk2wgD-U0t7J3c1hGCl9uE
|
329 |
pgpipe/misc.py |
sha256=FyqzEs_eQvZ3slaXfIIWp_z6K8hVTLoJ03ZU8Yb5A4A
|
1785 |
pgpipe/model.py |
sha256=Xok-OGk-DKKKlccfS1cbm6zfqan_OWYAe8AcSQ5dnTI
|
14972 |
pgpipe/model_creator.py |
sha256=p2LtVZpEDygVbqD0nKRhZvp8Wwa7_mt2v8Yj6IU63eI
|
32466 |
pgpipe/model_sampler.py |
sha256=BTeIRYwqpqg9312JtO2kE-6354jNE_2CYmfLQALrFIg
|
12916 |
pgpipe/parse_functions.py |
sha256=TkZbCFAVNVNQIAR3EGT-cekiwhhD098mOBEcGMseL0E
|
5548 |
pgpipe/picard.py |
sha256=Q7I0AVkM5kYI-9eXb0bS6HQXXhT2FtGvI9eywGcKlns
|
7885 |
pgpipe/plink.py |
sha256=DD6QEh9shLFk86aZUMJpRwh3NVb4ChOo5ypkT6wKalc
|
20584 |
pgpipe/plink_linkage_disequilibrium.py |
sha256=5Y3UatXxl5TkJ_OzQoKMCIH9P8Djc869FemRmZlaonU
|
23654 |
pgpipe/shapeit.py |
sha256=Q09iwP3CAUZXfkZsj4dgkflt437sRP9voyRUspxR7lg
|
7039 |
pgpipe/site_stats.py |
sha256=LrS6QLnY4IqsMGyC55HlhPWK1lpmul_ulVDEa-M_ogM
|
4787 |
pgpipe/stat_sampler.py |
sha256=urkH2XMX6wav5GNswj2rcdFMrzsBbCfMH-EbsDuZEOQ
|
17756 |
pgpipe/subtract_bed.py |
sha256=bERRi7LG1IPNgTdsH1subqARk_4oBkxu6gPW3lUZ9JY
|
1291 |
pgpipe/test_cython.pyx |
sha256=oEle0oU2ey0t29KMVzTVFAm1X7rl04x6VeQvRsUh1Sg
|
1577 |
pgpipe/vcf_bed_to_seq.py |
sha256=eYm_TolaBRC7wLskAQzLf_gKWD7Xflx6Y23MfQy_5vk
|
19194 |
pgpipe/vcf_calc.py |
sha256=DskrlLMlKP7ZQl_T-8rFURRsIxkd45_BNPYfFdKERzQ
|
30680 |
pgpipe/vcf_filter.py |
sha256=8nc1gtbrQrriffItTiCsgM__MXIElSmaV_0UKFVcYHc
|
39139 |
pgpipe/vcf_filter_vcftools.py |
sha256=6t3va1zpjWsTYUg33sPGq5KKU434li-q2NmEh550qnw
|
29894 |
pgpipe/vcf_format_conversions.py |
sha256=K3SsjGoGrXqIdQeQxxsSreM0Wx0WNxb-HNhkm7lnrV8
|
15415 |
pgpipe/vcf_four_gamete.py |
sha256=Hh97xECoLbFvzoPbjZSD6LqFrvjZGQURQINN4dpIEOA
|
40767 |
pgpipe/vcf_liftover.py |
sha256=3noh6Ne0EKK-C80UMyrkh0khLWH84JKk5KnpWp_edXw
|
13829 |
pgpipe/vcf_phase.py |
sha256=OIAxPvZValTwayAOAmGYE-HiHefe-mhGg7HEx2iCYZ4
|
41187 |
pgpipe/vcf_reader_func.py |
sha256=aDHrA_6BYaqNh_GmBGXAfjCPtSgouRck4hkGHKAeEHI
|
25172 |
pgpipe/vcf_ref_to_seq.py |
sha256=BfnhI1-Cd4DX0afgUOeIxBnAYgopdt0R-lIEtYsMpT0
|
12482 |
pgpipe/vcf_split.py |
sha256=3zuDukS4En7AnZc0ni7pL7X-uKX44OgVSEOvdCpoR5k
|
23085 |
pgpipe/vcf_split_pysam.py |
sha256=FGBp4vr8G0J1Fg1g5XIMaw4unuFuYL2P770yOqtmLWg
|
15020 |
pgpipe/vcf_to_dadi.py |
sha256=F0_czT1rjcF730KkFOCCQvPcPewjsVWfXwpOueDK9dY
|
12918 |
pgpipe/vcf_to_fastsimcoal.py |
sha256=z__0ZkUKTTsNubdd7j9g3sChQ4hhHNo7h6gm7-qYE4c
|
15313 |
pgpipe/vcf_to_gphocs.py |
sha256=rUoHMM7UZ_kLU8PxFEvuqeSGlZoyO__04N119KQl0h8
|
11620 |
pgpipe/vcf_to_ima.py |
sha256=WJrx940AuEcpe56YQyHr5I5l-5QfdToScniDF-_KZf0
|
29977 |
pgpipe/vcf_to_sfs.py |
sha256=b1dEo62U1sw5BN6HCbIX3TikUto0OT2MhGc08v_KE00
|
27194 |
pgpipe/vcf_to_treemix.py |
sha256=icwZw99_udSQnoaN1kf8nAg051Jfl-WFfzy2a-H7wzI
|
12854 |
pgpipe/vcf_utilities.py |
sha256=9Px6BJqhVzn6lzLN9BGjM7_v1ZcjVvu3jK1uKVafg2s
|
14710 |
pgpipe/vcftools.py |
sha256=a_5basXODt7z3lpynhgnwS0XyNN8yD8s3IiUVYv3ku0
|
29755 |
py_popgen-0.1.10.data/scripts/admixture.py |
sha256=iZN9j3VyEILM5U8HaNHVI9ThXlSkrp1XOfF_xxIam5Q
|
13596 |
py_popgen-0.1.10.data/scripts/bed_utilities.py |
sha256=h5cs8pNBfes8Y2D327yf1n9UhWI3dZhfblBhT3fjEcA
|
23679 |
py_popgen-0.1.10.data/scripts/eigenstrat_fstats.py |
sha256=gkT405WjPUBXkSorcGgiY_yxBYoWMycGvYHaJC4vk5o
|
26109 |
py_popgen-0.1.10.data/scripts/ima3_wrapper.py |
sha256=LBapwN3_q8POaKnLpjNnrJQ60ARocGdj_cQQlXA5rRs
|
7682 |
py_popgen-0.1.10.data/scripts/informative_loci_filter.py |
sha256=IDzRPy8eJH2eN-cC9Hw4_YeisVSOwNOefvNN2qa_lXw
|
11784 |
py_popgen-0.1.10.data/scripts/model_creator.py |
sha256=HSYfrqj5_joBejMzHM276q18oicZc_6rFGKWn20y52s
|
32453 |
py_popgen-0.1.10.data/scripts/plink_linkage_disequilibrium.py |
sha256=tzSFnyeOQnDml35Ipl821T1un9Uy65z6LE-NLznVXDc
|
23641 |
py_popgen-0.1.10.data/scripts/stat_sampler.py |
sha256=o5sWSn3I-2qh4pqv0bzwF5cqU26_2ErW3M_LfyhaqeI
|
17743 |
py_popgen-0.1.10.data/scripts/vcf_bed_to_seq.py |
sha256=KPQhSIb0JxnvoptAOkp5VXXxrQYe9ktH1mr3rzS5LcU
|
19181 |
py_popgen-0.1.10.data/scripts/vcf_calc.py |
sha256=mIgDFBU8Uw1SzkpvkD5dESatrQiPDARJCzlhvYBNGIE
|
30667 |
py_popgen-0.1.10.data/scripts/vcf_filter.py |
sha256=z_EV3QKUwVlenF8JarEPs7pPkvxdaD7gQ8UV_jwwXDI
|
39126 |
py_popgen-0.1.10.data/scripts/vcf_format_conversions.py |
sha256=RuHBWRx5JtJYc5Bd2sVe6idx1eAHma8KJv9Zf78v9jI
|
15402 |
py_popgen-0.1.10.data/scripts/vcf_four_gamete.py |
sha256=brqSqZO7HLabdHMAahHU1Q-1Uc-Lx5nvR3hRChSBEuI
|
40754 |
py_popgen-0.1.10.data/scripts/vcf_phase.py |
sha256=lV8es_y3IaCDw889g8x5BAFu3XDGUOznu4P-07c8Ji8
|
41174 |
py_popgen-0.1.10.data/scripts/vcf_split.py |
sha256=iud2qYq-lQ-NQks0aIn_ZiIytY_Aor2i_g9W834Pf1k
|
23072 |
py_popgen-0.1.10.data/scripts/vcf_split_pysam.py |
sha256=FGBp4vr8G0J1Fg1g5XIMaw4unuFuYL2P770yOqtmLWg
|
15020 |
py_popgen-0.1.10.data/scripts/vcf_to_dadi.py |
sha256=wPUZftySDqW60rx2GgrwS3_PozX2XBNpf_oo9zOsE1g
|
12905 |
py_popgen-0.1.10.data/scripts/vcf_to_fastsimcoal.py |
sha256=TR4VJrnoUCi6ojYmz7IaRU-ydl2u9P6BNHlbR4UBeyk
|
15300 |
py_popgen-0.1.10.data/scripts/vcf_to_gphocs.py |
sha256=naGSkmDYIQ9HAfLzkJvMmaM2WXp3BCuh-82tYpfFKNQ
|
11607 |
py_popgen-0.1.10.data/scripts/vcf_to_ima.py |
sha256=wCEGEYN4jRfRgWCGum1Pois9jMIE2LaAKYBDXXzBPD4
|
29964 |
py_popgen-0.1.10.data/scripts/vcf_to_sfs.py |
sha256=sODAUtFuT6ng5P5HNpjahtUJaWt_CLKOsBfKtwIKllk
|
27181 |
py_popgen-0.1.10.data/scripts/vcf_to_treemix.py |
sha256=fSasPSUHrn5O9RldrpiRMi8xaGItpMrQlfdeZ1djBNM
|
12841 |
py_popgen-0.1.10.data/scripts/vcf_utilities.py |
sha256=0HqobINVR1kkXOQEf1jIBtIpGbMatP_waJjD53lG3us
|
14697 |
py_popgen-0.1.10.dist-info/METADATA |
sha256=XLyTspGdkqkuiplldLKJl05UQMWO_0WR5LibiQYaLHc
|
2279 |
py_popgen-0.1.10.dist-info/WHEEL |
sha256=EVRjI69F5qVjm_YgqcTXPnTAv3BfSUr0WVAHuSP3Xoo
|
92 |
py_popgen-0.1.10.dist-info/top_level.txt |
sha256=H2ihnf5Mq876-KdcbYqdv948EIp64NLnXwY27rE27tY
|
7 |
py_popgen-0.1.10.dist-info/RECORD |
— |
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