Reverse Dependencies of psims

The following projects have a declared dependency on psims:

• casanovo — De novo mass spectrometry peptide sequencing with a transformer model
• depthcharge-ms — A mass spectrometry toolkit for deep learning with Transformer models.
• massql — Mass spectrometry query language python implementation
• ms-deisotope — Access, Deisotope, and Charge Deconvolute Mass Spectra
• ms2ml — Provides an intermediate layer between mass spec data and ML applications, such as encoding.
• mzspeclib — HUPO-PSI Spectral library format
• psm-utils — Common utilities for parsing and handling peptide-spectrum matches and search engine results.
• pyteomics — A framework for proteomics data analysis.
• simsalabim — Simple Interface for MS Applications
• vimms — A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics.