prophyle
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0.3.3.2 | prophyle-0.3.3.2-py3-none-any.whl |
Wheel Details
Project: | prophyle |
Version: | 0.3.3.2 |
Filename: | prophyle-0.3.3.2-py3-none-any.whl |
Download: | [link] |
Size: | 1119912 |
MD5: | 1f3f8efeaad8362b96c573bb30f42609 |
SHA256: | 165bf71ef8e6f920ef8867401c9ff6389ec3aa2d72000a41eabacf4c36b14227 |
Uploaded: | 2024-04-21 15:31:39 +0000 |
dist-info
METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt
METADATA
WHEEL
Wheel-Version: | 1.0 |
Generator: | bdist_wheel (0.43.0) |
Root-Is-Purelib: | true |
Tag: | py3-none-any |
RECORD
Path | Digest | Size |
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prophyle/1step_match.py | sha256=MaI9OgPEIEWqbpRSTGN7ENL6bpBZJNWQhDxQ3jFpOhs | 2086 |
prophyle/Makefile | sha256=Snz5E4O_89RE-4dtyOSzj39epWBw0e6GMTSjJHQECt4 | 651 |
prophyle/__commit.py | sha256=6p5MGqu_ZfLRVuEH43mUEL0hVoC9Fov70k-Nb1Z54X8 | 78 |
prophyle/__init__.py | sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU | 0 |
prophyle/_all_kmers.py | sha256=mSis1TtFvbA_ajTrtkrkiTD6ewkClyQkjaiv4bfk0Hs | 973 |
prophyle/_fa_norm.py | sha256=yTmSw7OMKKRSEw3ODxTzxqlA0aImRTaWfLjhabVxzmU | 1862 |
prophyle/_fa_to_kmers.py | sha256=TLxX6CsnFP-cl-IbSZ1L1OMjhnylBa5PK--LeOfBkeY | 3636 |
prophyle/increment_version.py | sha256=D5sIvP5jyP5KJD9Blk9HtnBh4AUIbZ7zkgXvRE3Glz8 | 435 |
prophyle/prophyle.py | sha256=_-mhGyAlOakKmUSNKTX_upBVgxqenRFcFY1fVyQNCO4 | 48225 |
prophyle/prophyle_analyze.py | sha256=uaSQN41XSljdKaCcFgb6t5kjUWDjOE5USDIeEKxK4Nc | 21074 |
prophyle/prophyle_assignment.py | sha256=6c2sTm-NE2bcoe1HW30w2P5GLfgUHfmThbhy3nKba0Q | 27164 |
prophyle/prophyle_ncbi_tree.py | sha256=f2t8Yyjk969yFh3jI04GDWnD7w6iTCSLBzyBfeJzLOs | 9093 |
prophyle/prophyle_oldrefseq.py | sha256=AwKTZqjEcc4qKeanbsClvRJNYXMz69TmlHjZyLQJ2nA | 3939 |
prophyle/prophyle_paired_end.py | sha256=_2gU_5OrsJlgf7AOv5VrkKR1mDHwNvTFioe37RVU1f8 | 5028 |
prophyle/prophyle_parse_rpt.py | sha256=EeuLGcTwbrNxLcUfO54NZeVWiTfT_mw9a5D8H8sAcEc | 763 |
prophyle/prophyle_plot_tree.py | sha256=c-gB42QOcfT2_pNiXtEN8k934YOuk2-IZijwWMIovzA | 2409 |
prophyle/prophyle_propagation_makefile.py | sha256=qnk5IsV8PPvDhzo1TqcKRmCha-KJP_ipLB4hSor9IQ4 | 14151 |
prophyle/prophyle_propagation_postprocessing.py | sha256=BmuVX2vK0NlI_vrUvhHgbZyn-KBJXHVQGUbV6iN5QSI | 4878 |
prophyle/prophyle_propagation_preprocessing.py | sha256=B5Osl6CUxFr9iz_oGI74vlEyDXToVwLnhI2dkhJau6E | 6126 |
prophyle/prophyle_split_allseq.py | sha256=3TnKSyW2S5lmQAdcLjPS28Jp7hyQEfno6RJ7oT0NVWw | 1762 |
prophyle/prophyle_validate_tree.py | sha256=J1GkTW3ZB12jp6ZM9bP69ECrxqwH5ccZ7vZXbTds5o8 | 1090 |
prophyle/prophylelib.py | sha256=inXivZxLSQ1v_0i-oLbkQkdaS86VWMmNAXdrHW26uqI | 15290 |
prophyle/tree_print_fasta_names.py | sha256=IUSPopqJRGLPDdYUfdFbRj_Gi4VklHgAz68LJf8mL8E | 1020 |
prophyle/version.py | sha256=-5XxICmM3D_Is6SLnxM6v_Iv1BrWDI5s1qWzKWJkPC4 | 81 |
prophyle/prophyle_assembler/Makefile | sha256=RGebpejM6yKZLZ5rpirwKDTxB4fCA3J11Pim4ZeMJrE | 373 |
prophyle/prophyle_assembler/kseq.h | sha256=OKa1P3Yu2EPLH_-cXXFKxrgzjpJko2tdlvoJrNqcfp8 | 8795 |
prophyle/prophyle_assembler/prophyle_assembler.cpp | sha256=KM-03V4MgS7-dKCe9TG3IaoAYZC9O_sree5HL3-A9OY | 16593 |
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prophyle/prophyle_assignment/read_processor.cpp | sha256=oBOZroV20z9Ib-yo1aoxZp6SZjJIedwkOj3QHdO7ZVg | 9310 |
prophyle/prophyle_assignment/read_processor.h | sha256=6w_QQjLDJ57TOUdCfVtVxNMWONkJoWJfr_-ZdwkXEQU | 2106 |
prophyle/prophyle_assignment/tree_index.cpp | sha256=zYMeurBbmg8yl_K8k1PYaC07UBWgrGYMFrmqTIbbw4A | 3404 |
prophyle/prophyle_assignment/tree_index.h | sha256=DtIlUI8XJapm_OsnOHZ78srHrKYp5T3KlJLJMNasexY | 1566 |
prophyle/prophyle_assignment/word_splitter.cpp | sha256=mk7clUUFFGw4cXJ3fSjRnMFE7ZiOsEm11-XZcWrx1ZM | 296 |
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prophyle/prophyle_index/contig_node_translator.c | sha256=72QQUnrickerg917wdtRSj8IGTD0bV6TIL4aigSWU6M | 1802 |
prophyle/prophyle_index/contig_node_translator.h | sha256=8j31I_rmtc2FyErrYeJ2eCQQbL1H67feVPad2xraFPo | 427 |
prophyle/prophyle_index/klcp.c | sha256=lkcMV7hWYvC9MwMNR5Yan9TKrUib5UvxVP7isSgVaBo | 5640 |
prophyle/prophyle_index/klcp.h | sha256=jU7MAvLO4p-DJn4_-wCyzaemf3gniapEi5IqJkJmEpY | 619 |
prophyle/prophyle_index/main.c | sha256=_XZxjvd3RL4DQfqSD1p7vxEeu1bJKuv0Tmy25-nXLNM | 4823 |
prophyle/prophyle_index/prophyle_index_build.c | sha256=GYAzP2JBveXGqP9UVjxcTCcJMgzuRZugCbRTjhIDAsM | 3942 |
prophyle/prophyle_index/prophyle_index_build.h | sha256=GuaNo6rCjft7PBUWYpKNrz5M39cbEmUB9DFi6oKshCc | 415 |
prophyle/prophyle_index/prophyle_query.c | sha256=uuwH4gPNeIIzbg5IZHvLpMqk4Yq-xO-Rssv4IL2PAYk | 18322 |
prophyle/prophyle_index/prophyle_query.h | sha256=-9U8cp-8qHiM4C9lwFvk0iQXl5-oC0jh7kmcrYti1Lc | 934 |
prophyle/prophyle_index/prophyle_utils.c | sha256=tVvIqOOEGb5F7ZUgtogLppgVSZCnAfmfmeYlLxSeCFg | 502 |
prophyle/prophyle_index/prophyle_utils.h | sha256=TomgM2z4djzyGy9AEqLwVeS2lmrHKIHWjEfcdtwanVc | 588 |
prophyle/prophyle_index/bwa/Makefile | sha256=FGAI5ejRuJv7_fVsbwvOyK1lJizdv4Rymn_MWc9bwrg | 3286 |
prophyle/prophyle_index/bwa/QSufSort.c | sha256=YQX-CT_cy1isyy4ua2Cqfwtcb9PGV-T6zFvX35Lhe78 | 12638 |
prophyle/prophyle_index/bwa/QSufSort.h | sha256=WdqM-ushgFiVSl_MCdaE9rmLJ-h3btyoJejJLHZWJTk | 1646 |
prophyle/prophyle_index/bwa/bamlite.c | sha256=As36vm0-fNAMyw8tQOHsfwWiqeUfCQRRyqPhHOCJuxY | 6098 |
prophyle/prophyle_index/bwa/bamlite.h | sha256=Xk_ZUQC8I5UcJ8R5xGSHgPxXHdqwgCDvRIQde4Z1K5o | 3124 |
prophyle/prophyle_index/bwa/bntseq.c | sha256=RsSNsogIjxfWYCR-0eJYyhc9rEMLY9EMhEWM1v6xwbE | 13988 |
prophyle/prophyle_index/bwa/bntseq.h | sha256=rB7uVqOnm_YBBgRhMp2rNhXMucqtehy1d8gdA4_KKJY | 2842 |
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prophyle/prophyle_index/bwa/bwamem_extra.c | sha256=gVXJUoNB2bhoNOdQAE-d3D0bhN74LNhYSGY6zGbU9wQ | 5810 |
prophyle/prophyle_index/bwa/bwamem_pair.c | sha256=gnoTq52T9iI1BzSFqXgZgrXyeG1XO3fa5fBS5xosh_Y | 18618 |
prophyle/prophyle_index/bwa/bwape.c | sha256=KGJRGzr825LNIcwCBamu-_dGEZpYvLTuBqeO0dEWGEA | 29396 |
prophyle/prophyle_index/bwa/bwase.c | sha256=wcidbTkI5a7iK984g9x08bW1INV2NwgahC4GCsgt9ds | 19566 |
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prophyle/prophyle_index/bwa/bwaseqio.c | sha256=ET-kUb4PouI740pxlV5kmU4yWr3m0X4SJtjK1Y31FWU | 6868 |
prophyle/prophyle_index/bwa/bwashm.c | sha256=czsqhHao5a3KN0fkiUtiMvyhDjdFbfuJOO40pFUpylA | 5816 |
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prophyle/prophyle_index/bwa/bwt_gen.c | sha256=nmuT28Dm7SyQK0AFHrbt_du0bkka-4_3F5ix_SFKBgI | 54027 |
prophyle/prophyle_index/bwa/bwt_lite.c | sha256=JHW2CgZk-8FUrjGj3bmD8n8zWXnJMVPAGTnzgu9cQ6I | 2682 |
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prophyle/prophyle_index/bwa/example.c | sha256=sS-mGFhTclJQTzREVGhFQ460tX6-ziKINDcEg8JpX6I | 1844 |
prophyle/prophyle_index/bwa/fastmap.c | sha256=Xhqu_lRvv4zB-WTp4AVYlx4ZegGj7EUb48gFj3Pspmc | 21027 |
prophyle/prophyle_index/bwa/is.c | sha256=gA12_MNEo_NsIr-Ik_Bx-2Um_pUbL1cA4_RRLN_m2y4 | 6674 |
prophyle/prophyle_index/bwa/kbtree.h | sha256=-BHxd4jb_hUK49NO_czDvdGRP8d3KJfNC8askWVrgnU | 15889 |
prophyle/prophyle_index/bwa/khash.h | sha256=Xw_d4gNx-bbUzsiSpW2UutiLibfTMaf-I8sGJOYuzjo | 20888 |
prophyle/prophyle_index/bwa/kopen.c | sha256=8U1Yh_KwcXZVodmklE28BBfVBFZLzz-mOfo0n-Pu-P0 | 9714 |
prophyle/prophyle_index/bwa/kseq.h | sha256=_iH4E8XTpqg1X5bBjtR_XS7VHzoAlHQI50qthaEhEnE | 8857 |
prophyle/prophyle_index/bwa/ksort.h | sha256=Tun6lkR9xS7ftDM_jVY5mIfjWSPEwejGiWx4H-93VPo | 9718 |
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prophyle/prophyle_index/bwa/kstring.h | sha256=hGpbZa24I09FKM-trlQ_Qet19zgxQSgat3SH7gCHMvk | 2332 |
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prophyle/prophyle_index/bwa/kvec.h | sha256=LP9f35Wsm8ohahz-oA90tchPP6oZh4l0SFhzB0ysN68 | 2940 |
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prophyle/prophyle_index/bwa/neon_sse.h | sha256=hix6hwj4URzOk6OGQbOPaCs1O0_Ska07GGSwyF4BVIs | 1482 |
prophyle/prophyle_index/bwa/pemerge.c | sha256=IzIVTqJSENn1RH-zqzrMdAmmFGKBCMPvvo2BisrbEto | 8825 |
prophyle/prophyle_index/bwa/rle.c | sha256=RYTtoURzJu_Bh7TVGkP6R0uvGwwadC_b_0N2OibCnNw | 4821 |
prophyle/prophyle_index/bwa/rle.h | sha256=ihDdGtAy7fkEVU69vSBOIzlDJED8XfZwlF-_yhIDnyA | 1910 |
prophyle/prophyle_index/bwa/rope.c | sha256=orYd-8TpRy2_jK8VGCv3Xl70ns7ljlNXSszQ7pIxFaI | 9019 |
prophyle/prophyle_index/bwa/rope.h | sha256=5vjcO591S9EuP3nBOuspmUwPMnwDOzzeb3i-14Gk3Ys | 1548 |
prophyle/prophyle_index/bwa/scalar_sse.h | sha256=F_ck-Mc_aRBgfqBDYKn27ngrsjl8uBZf3foiA-NHXog | 2619 |
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prophyle/prophyle_index/bwa/utils.h | sha256=AoUjNJbNK-FzP2LZ2VlA8ffPfGGAJmGOOsmnSx3zaoY | 3916 |
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prophyle-0.3.3.2.dist-info/WHEEL | sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ | 92 |
prophyle-0.3.3.2.dist-info/entry_points.txt | sha256=0441KlGsKa8JMZ-3sR7y_oP1xzLGpQy0o2u4aBRfBSA | 716 |
prophyle-0.3.3.2.dist-info/top_level.txt | sha256=_O79qh1Y6c3mQFMgEB6D3-HiJcqDj73eZBOm8eY1CY0 | 9 |
prophyle-0.3.3.2.dist-info/RECORD | — | — |
top_level.txt
prophyle
entry_points.txt
prophyle = prophyle.prophyle:main
prophyle_analyze.py = prophyle.prophyle_analyze:main
prophyle_assignment.py = prophyle.prophyle_assignment:main
prophyle_ncbi_tree.py = prophyle.prophyle_ncbi_tree:main
prophyle_otu_table.py = prophyle.prophyle_otu_table:main
prophyle_paired_end.py = prophyle.prophyle_paired_end:main
prophyle_plot_tree.py = prophyle.prophyle_plot_tree:main
prophyle_propagation_makefile.py = prophyle.prophyle_propagation_makefile:main
prophyle_propagation_postprocessing.py = prophyle.prophyle_propagation_postprocessing:main
prophyle_propagation_preprocessing.py = prophyle.prophyle_propagation_preprocessing:main
prophyle_split_allseq.py = prophyle.prophyle_split_allseq:main