Reverse Dependencies of pod5

The following projects have a declared dependency on pod5:

• blue-crab — blue-crab: A Slow5/Blow5 <-> Pod5 converter
• capfinder — A package for decoding RNA cap types
• fast5_rekindler — Collates information from BAM and POD5 files and generates FAST5 files for use in legacy tools such as tailfindr.
• loreme — Extract Methylation calls from ONT or PB long read data
• nanogo-basecaller — A bioinformatics pipeline for basecalling ONT NGS Data.
• ont-remora — Nanopore methylation/modified base calling detached from basecalling
• pod5Viewer — GUI for inspecting ONT pod5 files
• read5 — Wrapper to read fast5 and pod5 files.
• read5-ont — Wrapper to read fast5 and pod5 files.
• rnakinet — Package for predicting 5EU in nanopore reads and predicting RNA halflives
• seq2squiggle — End-to-end simulation of nanopore sequencing signals with feed-forward transformers