Reverse Dependencies of phate

The following projects have a declared dependency on phate:

• akey — akey
• ccsf — Leveraging cell-cell similarity from gene expression data for high-performance spatial and temporal cellular mappings.
• cellograph — cellograph
• CytofDR — CyTOF Dimension Reduction Framework
• cytopy — Data centric algorithm agnostic cytometry analysis framework
• cytotools — A small package of utilities for analysis of cytometry data in Python
• degex — Detect Gene Expression in Single-CEll data
• drcell — GUI to generate, cluster and optimize dimensionality reduction output
• feature-clock — Feature Clock, provides visualizations that eliminate the need for multiple plots to inspect the influence of original variables in the latent space. Feature Clock enhances the explainability and compactness of visualizations of embedded data.
• genomap — Genomap converts tabular gene expression data into spatially meaningful images.
• heatgeo — Heat geodesic embeddings
• litds — litds
• m-phate — m-phate
• meld — MELD
• multiscale-phate — multiscale_phate
• neuroboom — A suite of python tools for visualisation and analysis of Connectomic data
• ngs-toolkit — A toolkit for NGS analysis with Python.
• omicverse — OmicVerse: A single pipeline for exploring the entire transcriptome universe
• presto-multiverse — Presto: Projected Embedding Similarty based on Topological Overlays
• pyVIA — no summary
• seagall — Single-cell explain etc etc
• simplebitk — A bioinformatics tools kit
• xsc — xsc