Reverse Dependencies of pdb-tools
The following projects have a declared dependency on pdb-tools:
- arctic3d — Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
- evodiff — Python package for generation of protein sequences and evolutionary alignments via discrete diffusion models
- mdms — An interface to one of the most popular Molecular Dynamics codes - Amber - which aids user in preparing and running their own simulations.
- nerrds — NERRDS uses backbone chemical shifts to generate an ensemble
- pdb2af — pdb2af downloads AF2 predictions that overlap with PDB structures
- poli-base — poli, a library of discrete objective functions
- poli-core — poli, a library of discrete objective functions
- rush-py — Python SDK for interacting with the QDX Rush API and modules
- SieveAI — SieveAI: An Automated Drug Discovery Pipeline
- tengu-py — Python SDK for interacting with the QDX Tengu API and modules
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