Orange3-SingleCell

View on PyPIReverse Dependencies (0)

1.7.2 Orange3_SingleCell-1.7.2-py3-none-any.whl

Wheel Details

Project: Orange3-SingleCell
Version: 1.7.2
Filename: Orange3_SingleCell-1.7.2-py3-none-any.whl
Download: [link]
Size: 798819
MD5: e0759ba681caf4dcbeaffbda28e8ebd0
SHA256: 8f017098ad671ba02bc89b97a4602fb07748a4485b6c38a6c4d0e0bb73e1c077
Uploaded: 2024-06-28 08:18:59 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: Orange3-SingleCell
Version: 1.7.2
Summary: Add-on for bioinformatics analysis of single cell data.
Author: Bioinformatics Laboratory, FRI UL
Author-Email: info[at]biolab.si
Home-Page: https://github.com/biolab/orange3-single-cell
Project-Url: Bug Tracker, https://github.com/biolab/orange3-single-cell/issues
Project-Url: Documentation, https://singlecell.biolab.si/docs/
Project-Url: Source Code, https://github.com/biolab/orange3-single-cell
License: GPLv3+
Keywords: orange3 add-on
Requires-Python: >=3.6
Requires-Dist: Orange3 (>=3.34.0)
Requires-Dist: orange3-bioinformatics (>=4.0.0)
Requires-Dist: fastdtw (==0.3.2)
Requires-Dist: pandas (>=0.23)
Requires-Dist: loompy (>=2.0.10)
Requires-Dist: xlrd (>=2.0.1)
Requires-Dist: openpyxl
Requires-Dist: anndata (>=0.6.21)
Requires-Dist: numpy
Requires-Dist: scikit-learn
Requires-Dist: sphinx; extra == "doc"
Requires-Dist: recommonmark; extra == "doc"
Requires-Dist: sphinx-rtd-theme; extra == "doc"
Requires-Dist: docutils; extra == "doc"
Requires-Dist: twine; extra == "package"
Requires-Dist: wheel; extra == "package"
Requires-Dist: coverage; extra == "test"
Provides-Extra: doc
Provides-Extra: package
Provides-Extra: test
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 1088 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (70.1.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
Orange3_SingleCell-1.7.2-py3.11-nspkg.pth sha256=UYCZtLWueceGiAlmXKRJUZ0TWQEubpPoQ1pVnAAsME0 502
orangecontrib/single_cell/__init__.py sha256=182oOd4qWSHkZTM3Sz0L5TDgh5QnVOIQg-OG8D3oYtM 245
orangecontrib/single_cell/reader.py sha256=lBEoNJ-8r6nPCgHvBcMa40C1r7ydv_dj-GN0pUiHolM 2142
orangecontrib/single_cell/preprocess/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
orangecontrib/single_cell/preprocess/alignment.py sha256=sVIIDBU5t3qlRQ756IAU3o3hLFc4cRZH0erYQcXvzo0 10512
orangecontrib/single_cell/preprocess/biweight.py sha256=zw4cHGwMCINJ2SMIJlzrdBN3RsT6Cygm0KJNbVDGv7w 28199
orangecontrib/single_cell/preprocess/cca.py sha256=3VBbPjxRgWAYH9qE5MUnQnFdB-ZUx-55mLh7V-s1msc 4152
orangecontrib/single_cell/preprocess/clusteranalysis.py sha256=-Iy51cvmtXD2WJzeNbbCQUoiH86qeY8eKeRI3ZnC5LA 17547
orangecontrib/single_cell/preprocess/scbnorm.py sha256=Zdx1m73GEG3XozM5ddcboyw-f-2sQpAnz6uyna7yf_I 8077
orangecontrib/single_cell/preprocess/scpreprocess.py sha256=v2GFciF_uoll4RyFuss-UNfUc9s6u6JpT5KNZBTMv9M 10477
orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle sha256=OhaKrQhIyLjQ6vDY5yjS22ytVGstqsBL49Mq_t_i-DI 8268912
orangecontrib/single_cell/tests/__init__.py sha256=mE2hOnh8QPOzsN6ReDKc6AfaeGZShs330fKhoZYJ2S4 481
orangecontrib/single_cell/tests/test_load_data.py sha256=VNDDMagktCArmPAh3w0j8OpYSVtWP2gbxwbV8jDpUB8 9457
orangecontrib/single_cell/tests/test_owaligndatasets.py sha256=mQ4SduSXeEC0snslMBRiOhoskfHL80qLCxO-5HKXb-g 3844
orangecontrib/single_cell/tests/test_owbatchnorm.py sha256=ZuyPq1qjo48r1aLF5KVaXXzJCzVrTJYF-h2vpDsHFb0 3889
orangecontrib/single_cell/tests/test_owdatasets.py sha256=31W5tA-Qsde0VtvNO-KJ2b_UbPoH1r5rOR8L821gOek 903
orangecontrib/single_cell/tests/test_owdotmatrix.py sha256=N1hlGA59Vpvyb40Iy5HJOE-uo2LPowXal53MZRKLbzE 8322
orangecontrib/single_cell/tests/test_owdropout.py sha256=zFr8zveRrWz38MdFER80kCUW9itCy-Fk-SvFI0kNj1s 10332
orangecontrib/single_cell/tests/test_owfilter.py sha256=-E_qF9Vq4yGQXfmw7I8cUnI0tvkXgq-x0bjYrN7Jp3Q 3652
orangecontrib/single_cell/tests/test_owgenerank.py sha256=TmdzcFUyNHQCTrpWMzRcoy3SqJeFABKSTZRwNhZ4QxA 2504
orangecontrib/single_cell/tests/test_owloaddata.py sha256=BGud41Dx8tpDZ0ASoqfi9rMFf_jD3CtRX2eombxfd3U 17487
orangecontrib/single_cell/tests/test_owmultisample.py sha256=F1jA062Nacbxd7YmaRAjzx6qAjBtvjotjl3nXtF9EhI 4817
orangecontrib/single_cell/tests/test_owscorecells.py sha256=Q5bFOGn0nWj4eczjFpP8fqDDZhb4lRYJj5MmOb6MCDg 2641
orangecontrib/single_cell/tests/test_owscoregenes.py sha256=cDMdfAgRnQgoJNOlcR4cR0BSNqTO6kH4otun5QpiwAQ 1203
orangecontrib/single_cell/tests/test_owscpreprocess.py sha256=mM5rvFOFCvo-3V1BoVVzb70GlH-VdE0B2MLwc2fNdYo 6749
orangecontrib/single_cell/tests/test_owspatialautocorrelation.py sha256=B4lBZQ28u4lI_l7PXRRXpY5LNCDj1LvVgT_8VMz5c54 1735
orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt sha256=zB9jHtgitE9nSteo_A1l67xiRxNTQafEmul-R4t-bI4 1084
orangecontrib/single_cell/tests/data/data.csv sha256=OlMujfmkbPTy7d8cyNeS4tNKu68NNB_OeQ8w0vOv_G4 554
orangecontrib/single_cell/tests/data/data.loom sha256=FkxBGCp3uVJ_rfFp0fpqWMVAUyiuOqVg9vZUoDOLfPk 14100
orangecontrib/single_cell/tests/data/data.pkl sha256=XN_JJj8d5znrMLC5s1cd462yji37ipAYfEN6wRV9hdo 5021
orangecontrib/single_cell/tests/data/data.txt.gz sha256=eEAaSHKi8BrMVIMtJYV-EhRSyE2v5MPFgKaOChb6QQc 361
orangecontrib/single_cell/tests/data/data.xls sha256=WF0XlXxEA2hXSuIvEsNdYGXDF7fqufadHgwCr9IihUw 27648
orangecontrib/single_cell/tests/data/data.xlsx sha256=V3V6rw-8ws-qynsFatcJXEd0NI2vxgblNyMuUvwOs9o 9160
orangecontrib/single_cell/tests/data/data_dense.h5ad sha256=PKtcLgPosuO81p7H4crRJ02bc_53LlL7A4QY0RCR89Q 11060
orangecontrib/single_cell/tests/data/data_sparse.h5ad sha256=PgrXLgsEBsRgrNfvf6a-B5T4d86t1-rXKKnZec6Z5iM 19560
orangecontrib/single_cell/tests/data/dermatology.tab sha256=Xg-918aWrpwLnPEZ7KbuFv-R1Busy3UF-9Z4-soT5vI 31682
orangecontrib/single_cell/tests/data/lib.cell.count sha256=Pa94l0Cqw40iLuA_kdOpBAyXPhlCnWHDxRHcf2p7WJE 428
orangecontrib/single_cell/tests/data/lib.cell.meta sha256=Fid-axpOGuhWNMm6Oh8uuAXHCJ07LNK6pnvgahejSFY 671
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv sha256=6xRc_cegBQxzrMaqulM8mPsjpOZ7BpgQvYo6DQUI310 380
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv sha256=78Yx50ndSCUuepx8wA6hdfjcPU_UAtMolatRWYLCwsk 13273
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx sha256=5S-fOQQuWB9PUgMIAqrxXvVTiemyy1YP2wY4tc92f-4 10847
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv sha256=_3-JJGg3IbqJTNUfoSOcZoYi0tf9qFNIujPQi5YU-P0 475
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv sha256=78Yx50ndSCUuepx8wA6hdfjcPU_UAtMolatRWYLCwsk 13273
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx sha256=bxGBgvXU72ciXKtqyiLCIvmVFXbgfxuvRBW89prLhtU 10790
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv sha256=z7Ke7aGwlgxmI8rsuCZ2pComRrJ5fXWgNMWRi5WjEDo 570
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv sha256=78Yx50ndSCUuepx8wA6hdfjcPU_UAtMolatRWYLCwsk 13273
orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx sha256=kZdRaySZPKhZChbvgD-D_pazODsDonWsm-A6Zf2AbK8 12021
orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv sha256=pTyZPc39gBvFM5AydOzGPKAQ5bpbILD3ubFnxrfLqVA 114
orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv sha256=-BM678PsU8G8R6p1sxy_OM11L7y9iiQKYysdRVq8rLI 105
orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx sha256=HKpKJk5luT00q6wdXEmcW0szY0YIPfOSeJXDZfx66m4 112
orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv sha256=HLQiu4XgRxnOp7u_QcEXIWAQtNjXeXqc_clrY1qlRiI 96
orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv sha256=wQKC_-CEUUYBtnBFHV6j3hgrfrKgRLwlH3FKyXf3tPM 124
orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx sha256=lQJsXEiSvSsqVPbTsmBaalSnXPmsBi-aHCbpF0jZIlY 105
orangecontrib/single_cell/tests/preprocess/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
orangecontrib/single_cell/tests/preprocess/test_alignment.py sha256=JjfJDmHhbViMvRO5tIxgHtrkQpcn7NvoBIHpTNGYlUQ 981
orangecontrib/single_cell/tests/preprocess/test_cca.py sha256=01gBABieBQqbfDMiEhPQHrbWgm0sSDhREefEJnT2P5k 1485
orangecontrib/single_cell/tests/preprocess/test_scbnorm.py sha256=yGlr8tenj5kh6KMni_fp3Xnm7tNcjkhxcDcl-oSVGdQ 8175
orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py sha256=s2KEcH938QWjzlnHra5fuKZnsCTz73WPS0SM5f-ODJU 10588
orangecontrib/single_cell/widgets/__init__.py sha256=gQPmF5i89C4R7QuD38mjZDeNdxMsaWjm61yI9y5k80U 1062
orangecontrib/single_cell/widgets/contingency_table.py sha256=sW63E9vSHJv0CLfrp2X1uzjq__kEfR01KUWM0RVBc2o 17883
orangecontrib/single_cell/widgets/load_data.py sha256=eKy_TSWrb7lHoN2F4jJWmA8dV_CayE3X8KeKsonm5_k 29156
orangecontrib/single_cell/widgets/owaligndatasets.py sha256=_82aSRAKdoN0XAoZceZtKsxbURb4jkXXdYzMQJt4p1k 21556
orangecontrib/single_cell/widgets/owbatchnorm.py sha256=37zMzaBEUaQLiNMOFfqFbQXVPOuSfK21fQUoBFa1KqM 9686
orangecontrib/single_cell/widgets/owdotmatrix.py sha256=SMb5TvEC13N5dLKcPOpI406OBSgoaEos4bie7ocK5uU 14271
orangecontrib/single_cell/widgets/owdropout.py sha256=mM6rjD7DQPyH5ZKCXwq7aAhngg6K_c6oqQ0FwI1JVHI 15423
orangecontrib/single_cell/widgets/owfilter.py sha256=0XzMuUg5RzQwH03P1dJODOqMBm7L2s9UbO68v1Fp8EI 40735
orangecontrib/single_cell/widgets/owloaddata.py sha256=pbYlYls2smRPH9yyEoBPjZfDmBUInGhBgfvjRrm6JJ0 25960
orangecontrib/single_cell/widgets/owmultisample.py sha256=cM1WbdheeRg4RbshVP-Wbz3kLYQCEqfUzcgd1zzyZqU 17828
orangecontrib/single_cell/widgets/owscdatasets.py sha256=D-AZ9sFGXchC1YAAAeL28B3xjfEcTjCqMeCYVRKfj3s 4164
orangecontrib/single_cell/widgets/owscorecells.py sha256=JTZwWvijVhh6V_OZa6bBKozPqQvjzgZgduLQQ5aN8vo 10923
orangecontrib/single_cell/widgets/owscoregenes.py sha256=y6SxX4sGAt70jz7XZkPWvWiXqWiwC769OFE2zfE-GBo 26130
orangecontrib/single_cell/widgets/owscpreprocess.py sha256=g4vCMkij6_Q0PrJkkjifiiSCt8kz3Ky4N2TiTmRvauY 23729
orangecontrib/single_cell/widgets/owspatialautocorrelation.py sha256=bLUVxyRhDG7eWfWV9Cy2ZDqSizy61bM5g8V7r51By_Y 8720
orangecontrib/single_cell/widgets/icons/AlignDatasets.svg sha256=5pvJyHzbWrdJjY-fqd3Osi9X3C6G2dQO_cBI9AeV1GY 1153
orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg sha256=3GaVh3pRzDwr4XaUjokkyPrbebhvis8RZ7d-dzKuoCs 1487
orangecontrib/single_cell/widgets/icons/Binarize.svg sha256=41M1MsHdU_c2OhzPauRmmYoQctAteFFfCuMRDFeqY64 1479
orangecontrib/single_cell/widgets/icons/DotMatrix.svg sha256=YzyAKKzRzTTpfCAguriTJwuKaQmUsxMFyOxF99mCVLc 2186
orangecontrib/single_cell/widgets/icons/Dropout.svg sha256=YE9SnBKk0gEaUdCQ49dBKQkPSgDtUoGoUDJbCqynS68 753
orangecontrib/single_cell/widgets/icons/Filter.svg sha256=QBZHt6fk1jFrMdBJenJhnzAL0zlbwOhvbd04PDGabt4 620
orangecontrib/single_cell/widgets/icons/LoadData.svg sha256=69-tcESULzudy3rZLHHCGwiO8uyUZDKXULmyzQ-O79Y 710
orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg sha256=asKaOanLwNK5winom00lGRuk2-2q-TeFEJ-vogeeCgc 758
orangecontrib/single_cell/widgets/icons/MarkerGenes.svg sha256=no-3lPNav4VavPrZY7bCQp4nRYV6jIRInLmsBJoSyE0 1232
orangecontrib/single_cell/widgets/icons/MultiSample.svg sha256=tncWotT2dPAqCPmwFntWIvZjqFUH_i9yh-c_kQdVx_0 961
orangecontrib/single_cell/widgets/icons/Normalize.svg sha256=9e3M0vLJvku2aVEGA1ItWxToRsR1w1MVrYUiDvglgGw 1401
orangecontrib/single_cell/widgets/icons/Rank.svg sha256=lZd2aUG5rNHPoyRY_-8l473k0bc6S1b_WeO7Cf8oXuA 2481
orangecontrib/single_cell/widgets/icons/ScoreCells.svg sha256=Nttwx6mEe4HS-hxxV2-RI8XPt_d8q3g7R6ieMiKqTdg 901
orangecontrib/single_cell/widgets/icons/ScoreGenes.svg sha256=4usiimq0msR7usYxJweOu5uQyTYtumHxhz59UFKDAMM 1582
orangecontrib/single_cell/widgets/icons/SelectGenes.svg sha256=yVcZFq0TcLGuscFnMQbewfYJMsaru6dkfjkw--f_Rj4 6765
orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg sha256=tC0_MQu9XDY7AQ7f0sy_yAFU1WSdXRRRKHmFgoLVDjk 810
orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg sha256=9bFr44PeXw-FjaTb-8-B_LVotAU1BXAR8EJ6bDFI8L0 1404
orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg sha256=JhBekXr8lXzCAbXQvtAz6VjJ3yRTH7c7c70Sctk-ieU 1280
orangecontrib/single_cell/widgets/icons/Standardize.svg sha256=f4vxo6F_n9ThYkf5J88Gf4TIg5COoBWAnIck9zMASWA 1304
orangecontrib/single_cell/widgets/icons/VCFFile.svg sha256=hdRBgOIdaUIj3v1PS-7a5hsoxBatsmZ7UW54Emdu2Hw 1806
orangecontrib/single_cell/widgets/icons/category.svg sha256=p1SQeU9QybxPnsASajyI2O__PfuKkWt32oWwEUPcThQ 871
Orange3_SingleCell-1.7.2.dist-info/LICENSE sha256=aaxgecz6bhrWFC7mrbSNfvX3ehVeLV4ZCjh4cTAts0w 756
Orange3_SingleCell-1.7.2.dist-info/METADATA sha256=ataWwY9n-c5uhK147sK8FMB8AkFtq_A2nXjLKGLLJqo 2351
Orange3_SingleCell-1.7.2.dist-info/WHEEL sha256=mguMlWGMX-VHnMpKOjjQidIo1ssRlCFu4a4mBpz1s2M 91
Orange3_SingleCell-1.7.2.dist-info/entry_points.txt sha256=hIoYZO32oaelNZzVX9I8wkJRl_4-rJOyNuY_BSYzYFg 287
Orange3_SingleCell-1.7.2.dist-info/namespace_packages.txt sha256=Iut-JTfT11SZHHm77_ZeszD7pZDWXcTweCbvrJpqDyQ 14
Orange3_SingleCell-1.7.2.dist-info/top_level.txt sha256=Iut-JTfT11SZHHm77_ZeszD7pZDWXcTweCbvrJpqDyQ 14
Orange3_SingleCell-1.7.2.dist-info/RECORD

top_level.txt

orangecontrib

entry_points.txt

html-index = orangecontrib.single_cell.widgets:WIDGET_HELP_PATH
Single Cell = orangecontrib.single_cell.widgets
vcftutorials = orangecontrib.single_cell.tutorials
single_cell = orangecontrib.single_cell

namespace_packages.txt

orangecontrib