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ont-remora

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3.2.0 ont_remora-3.2.0-cp311-cp311-macosx_12_0_arm64.whl

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Project: ont-remora
Version: 3.2.0
Filename: ont_remora-3.2.0-cp311-cp311-macosx_12_0_arm64.whl
Download: [link]
Size: 358062
MD5: f206518bee5d40db46a7f591ac76db0d
SHA256: 6bc2194ba2fa9aea877dfb5592766d2afb55c4f263a87f0e339de0abe0057f33
Uploaded: 2024-05-21 13:43:05 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: ont-remora
Version: 3.2.0
Summary: Nanopore methylation/modified base calling detached from basecalling
Home-Page: https://github.com/nanoporetech/remora
License: ont_public_licence
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python
Platform: any
Requires-Dist: tqdm
Requires-Dist: toml
Requires-Dist: torch
Requires-Dist: numpy
Requires-Dist: scikit-learn
Requires-Dist: thop
Requires-Dist: pod5 (>=0.2.8)
Requires-Dist: pysam (>=0.20.0)
Requires-Dist: parasail
Requires-Dist: requests
Requires-Dist: polars
Requires-Dist: plotnine (==0.12.4)
Requires-Dist: importlib-resources
Requires-Dist: pytest; extra == "tests"
Requires-Dist: pytest-cov; extra == "tests"
Requires-Dist: black (==22.8.0); extra == "tests"
Requires-Dist: flake8; extra == "tests"
Requires-Dist: sphinx; extra == "tests"
Requires-Dist: build; extra == "tests"
Requires-Dist: jupyter; extra == "tests"
Requires-Dist: patchworklib (==0.6.3); extra == "tests"
Requires-Dist: scipy; extra == "tests"
Provides-Extra: tests
Description-Content-Type: text/x-rst; charset=UTF-8; variant=GFM
License-File: LICENSE.txt
[Description omitted; length: 13184 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: false
Tag: cp311-cp311-macosx_12_0_arm64

RECORD

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remora/activations.py sha256=hKoSDW9r8-4bvHKo0STlmqXyGKt3f8jtzaE8D0w3qf4 508
remora/constants.py sha256=tcv73tPJbXJ-2WPKRbYDuVtH8IIQAti18MTufSVDFOc 7642
remora/data_chunks.py sha256=53TpF9yShqi3kEArPUt5HvEnBoXYPE8Av7ZZJIOUH8E 86949
remora/data_chunks_core.cpython-311-darwin.so sha256=V0AufJFSmN2OQtjUBCiL17QaBSmZxwUB1-2pQFgNqKk 204440
remora/data_chunks_core.pyx sha256=f6v2ga81_aXFcBEJu_kDB5p7cNf5eD-P97rsnYQNaHI 1536
remora/download.py sha256=qfDMNFuDXqX1jz2wcp8gZlhZQrt6EabiSvSW31WEEjY 1670
remora/duplex_utils.py sha256=cV5FSm_A_QJMuiPRh-J9sXRloPe1pMCRhPNjvjK53BQ 3353
remora/encoded_kmers.cpython-311-darwin.so sha256=6HvSPJa0eu1IJNQfj_hVLDJMKfAt0vilZrQrDPzgd_I 204512
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remora/io.py sha256=Cpsd09PLhrmlgOKXr7IDY9RUHa_9-XBooMhN0bnIphw 87927
remora/log.py sha256=bLF9YWXFSoJsfKpup8v7__iaxE6z2U_3ZpfQI8Is_aA 2434
remora/main.py sha256=Gb9d-OQ24xZtcHveCKU0QdQSFx1oIHLNOHfXnExzqwI 1901
remora/metrics.py sha256=77GrqWmWqV0TgwE0SG9AG4b1si2SvLjs5raTAEVTP0Y 3839
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remora/parsers.py sha256=Cl6PG7WMB8eFb_m7eGKX6es9l0aYXCI36qbK0FrM90g 78466
remora/prepare_train_data.py sha256=RyI9_0t8I0S0olKX_MLmDFF9uToMBjASJi2cMHzl3QM 8432
remora/refine_signal_map.py sha256=K4jbLeq78tku6ijG8JyB25aRSFNlFHtIdxYAnrPvtX4 31010
remora/refine_signal_map_core.cpython-311-darwin.so sha256=t7l7ALfsQqSg0WApRI_Rdjx-Kn0W2SlRwaYh-8OrPLM 258336
remora/refine_signal_map_core.pyx sha256=QGWCcphsJq7uZutRXf82xn8dwU5-gpVZXTRLIL4Vgxk 19514
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remora/trained_models/readme.rst sha256=nZzj4yWvxYQekqKuuv-WAHKFecU8UMdaQeAK_Si94Xg 338
ont_remora-3.2.0.dist-info/LICENSE.txt sha256=qTm-Ub9kSIxpYJ29TAwUB-sks0EsxXxegyUGwTd--9s 14471
ont_remora-3.2.0.dist-info/METADATA sha256=_OTVBOj73kKH3EIMjO1UIO72lfEWEXmunhlumC98Xxw 14329
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ont_remora-3.2.0.dist-info/entry_points.txt sha256=8_FJh-pfgjKTH2IGlDIJ4l61i9CbtHfgEq4jNibrc4U 43
ont_remora-3.2.0.dist-info/top_level.txt sha256=jpwPbLNtI8pCmzoLNoEu-eNAobKTrh-GK1PjnJU4NA8 7
ont_remora-3.2.0.dist-info/RECORD — —

top_level.txt

remora

entry_points.txt

[console_scripts]
remora = remora.main:run