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Project: nextstrain-augur
Version: 28.0.1
Filename: nextstrain_augur-28.0.1-py3-none-any.whl
Download: [link]
Size: 343438
MD5: fca63d7dd2fa596931f854a0ac96fa65
SHA256: 2c5e67520e83a6af549160644c77d2cc355fbe9881d40bb8fcf06621eb52d0cf
Uploaded: 2025-02-10 18:26:53 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.2
Name: nextstrain-augur
Version: 28.0.1
Summary: A bioinformatics toolkit for phylogenetic analysis
Author: Nextstrain developers
Author-Email: trevor[at]bedford.io, richard.neher[at]unibas.ch
Home-Page: https://github.com/nextstrain/augur
Project-Url: Bug Reports, https://github.com/nextstrain/augur/issues
Project-Url: Change Log, https://github.com/nextstrain/augur/blob/-/CHANGES.md#next
Project-Url: Source, https://github.com/nextstrain/augur
Keywords: nextstrain,molecular epidemiology
Classifier: Development Status :: 5 - Production/Stable
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU Affero General Public License v3
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.8
Requires-Dist: bcbio-gff (==0.7.*,>=0.7.1)
Requires-Dist: biopython (==1.*,>=1.80)
Requires-Dist: cvxopt (==1.*,>=1.1.9)
Requires-Dist: importlib_resources (>=5.3.0); python_version < "3.11"
Requires-Dist: isodate (==0.6.*)
Requires-Dist: jsonschema (==4.*,>=4.18.0)
Requires-Dist: networkx (<4,>=2.5)
Requires-Dist: numpy (==1.*)
Requires-Dist: packaging (>=19.2)
Requires-Dist: pandas (<3,>=1.4.0)
Requires-Dist: phylo-treetime (<0.12,>=0.11.2)
Requires-Dist: pyfastx (<3.0,>=1.0.0)
Requires-Dist: python_calamine (>=0.2.0)
Requires-Dist: referencing (<1.0,>=0.29.1)
Requires-Dist: scipy (==1.*)
Requires-Dist: xopen[zstd] (<3,>=2.0.0)
Requires-Dist: cram (>=0.7); extra == "dev"
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Requires-Dist: flake8; extra == "dev"
Requires-Dist: freezegun (>=0.3.15); extra == "dev"
Requires-Dist: mypy; extra == "dev"
Requires-Dist: nextstrain-sphinx-theme (>=2022.5); extra == "dev"
Requires-Dist: pandas-stubs (<3,>=1.4.0); extra == "dev"
Requires-Dist: pylint (>=1.7.6); extra == "dev"
Requires-Dist: pytest (>=5.4.1); extra == "dev"
Requires-Dist: pytest-cov (>=2.8.1); extra == "dev"
Requires-Dist: pytest-mock (>=2.0.0); extra == "dev"
Requires-Dist: recommonmark (>=0.5.0); extra == "dev"
Requires-Dist: Sphinx (>=2.0.1); extra == "dev"
Requires-Dist: sphinx-autobuild (>=2021.3.14); extra == "dev"
Requires-Dist: sphinx-argparse (!=0.5.0,>=0.2.5); extra == "dev"
Requires-Dist: sphinx-markdown-tables (>=0.0.9); extra == "dev"
Requires-Dist: sphinx-rtd-theme (>=0.4.3); extra == "dev"
Requires-Dist: sphinx-autodoc-typehints (>=1.21.4); extra == "dev"
Requires-Dist: sphinx-tabs; extra == "dev"
Requires-Dist: types-jsonschema (==3.*,>=3.0.0); extra == "dev"
Requires-Dist: types-setuptools; extra == "dev"
Requires-Dist: wheel (>=0.32.3); extra == "dev"
Requires-Dist: ipdb (>=0.10.1); extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
Dynamic: author
Dynamic: author-email
Dynamic: classifier
Dynamic: description
Dynamic: description-content-type
Dynamic: home-page
Dynamic: keywords
Dynamic: project-url
Dynamic: provides-extra
Dynamic: requires-dist
Dynamic: requires-python
Dynamic: summary
License-File: LICENSE.nextstrain-cli
License-File: LICENSE.txt
[Description omitted; length: 3306 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.8.0)
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Tag: py3-none-any

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nextstrain_augur-28.0.1.dist-info/RECORD — —

top_level.txt

augur

entry_points.txt

[console_scripts]
augur = augur.__main__:main