Path |
Digest |
Size |
mewpy/__init__.py |
sha256=cJo3_M3D9q2bZB9SnZpeJEtkm9mRrmKDRQjFV7sbmWM
|
2004 |
mewpy/cobra/__init__.py |
sha256=h354SMb2ZhOWki44IcHLB1oJxZw6Hvajd2Qtj5ETddQ
|
829 |
mewpy/cobra/medium.py |
sha256=xqZjfh6jCgBsCF8KHWeip3-a2E37UDMl5svmMBNecVk
|
9558 |
mewpy/cobra/parsimonious.py |
sha256=LlOlbesRmkvDBS6tQPf0rav9dSaAdVp5nXVYhWmO73Y
|
4243 |
mewpy/cobra/util.py |
sha256=euHlrGiEmSZ_Jvj6NOk4ZYpTCA8ULiDbWMDTMMEuC1A
|
10336 |
mewpy/cobra/com/__init__.py |
sha256=fg0ZeuNUOE_vhMOtiSepAayUMgq0yzC91bbEWG6D2q8
|
799 |
mewpy/cobra/com/analysis.py |
sha256=sW011jYcmME_IUxAkEUnJKo2PTFdzNMLjUm9diLZ9-M
|
20211 |
mewpy/cobra/com/similarity.py |
sha256=LFOBX-u3D3vQpjV2gLwdtENSe6XgW1CbsKQbye33Fz4
|
8422 |
mewpy/cobra/com/steadycom.py |
sha256=YCzwKc_Lyh6_I-FQ9PbrdOzrPRXsJt6q8ntPZLK0TAg
|
13935 |
mewpy/germ/__init__.py |
sha256=TWfrK7dHKzy1gxXhJV95gmVIh4LqSKS0IpogAnhaoDk
|
136 |
mewpy/germ/algebra/__init__.py |
sha256=ntMjX6FIxaR7fw0sASowGTAfK4YwmrmvGh2rPCk5izA
|
140 |
mewpy/germ/algebra/algebra_constants.py |
sha256=5MVYizyqOavfsCNuruWgibLEgclknV8Iev6FdX7ftNo
|
5528 |
mewpy/germ/algebra/algebra_utils.py |
sha256=dJnH4IteI_gzjg8iRsgvCunkz7oQaGYvG8uba-7Ge9I
|
1469 |
mewpy/germ/algebra/expression.py |
sha256=GWaFAEl1Q7DYsbfPaodRuKmYquCbHf10x3J3ho50Uuw
|
15123 |
mewpy/germ/algebra/parsing.py |
sha256=VC4i4hi-RhPxr4Qz8DfKbyEp1FXyyKpAYH50w5x4uRw
|
18392 |
mewpy/germ/algebra/symbolic.py |
sha256=XTCiI4ZTbSs-qaCLnrl9X3xnbWsWt6HJvHYIKI0ojoU
|
20461 |
mewpy/germ/analysis/__init__.py |
sha256=2i4Wl2zl0UrnWIIeqz69AGzGOwUGsmIMiFEcUmTw1vs
|
1548 |
mewpy/germ/analysis/analysis_utils.py |
sha256=z5jNnRNkoO-qtNo7UsqppViI-PdCLlQwdkyuFxYAPLo
|
9268 |
mewpy/germ/analysis/coregflux.py |
sha256=KxjDCrS4X2uH2q7ovRY9a6qinhmcABsOS75FkBPv5vM
|
23026 |
mewpy/germ/analysis/fba.py |
sha256=MmE6ozWqSuKUjjLSOU31h9zlAj5LGg3ODau8TUW-zvQ
|
3694 |
mewpy/germ/analysis/integrated_analysis.py |
sha256=W0XL2ijSsvvs7_JtnzED8WDW6pXxvVt4JW9aZMfsyB0
|
26281 |
mewpy/germ/analysis/metabolic_analysis.py |
sha256=xQTM2E8G2om19ypWkSBgPWUROc5icFHcDD1ofAt3jDU
|
8990 |
mewpy/germ/analysis/pfba.py |
sha256=686__hsrA6CzKzIntfxWaDK-uCJeY3fp-xhQ0LA4-SA
|
6251 |
mewpy/germ/analysis/prom.py |
sha256=m2Yo1Se0pe9GXXrfiscEq5o_CuyRf_9uN72xTjs3zGY
|
18155 |
mewpy/germ/analysis/regulatory_analysis.py |
sha256=AlvnPBc6YYxRJbnGRKhRz7V2aqVeLmFQcmMRyHrEjEw
|
2883 |
mewpy/germ/analysis/rfba.py |
sha256=ANiEOn81JyGC7kvZibJycFEkXSTES8jnIx3VMkhbQVY
|
24979 |
mewpy/germ/analysis/srfba.py |
sha256=bipMOtUsVXNdUJCsXGcFjWQI_g6W1rdf60oEkqjWKMo
|
34852 |
mewpy/germ/lp/__init__.py |
sha256=mkjLoKZIpFL_kFXgfxUsgCITJA9NaBFh_uQTlwn9YNk
|
179 |
mewpy/germ/lp/linear_containers.py |
sha256=iWmPlZXh4opOeR7kduyv38B98MS1GiJs6L090PnCYvs
|
5917 |
mewpy/germ/lp/linear_problem.py |
sha256=KCKcVzhHsnl09LDmVD7YoCXIR_FotM0LqkXxsYbv72M
|
27457 |
mewpy/germ/lp/linear_utils.py |
sha256=AypC-xTSjweCGoYcuhKz4yN-VpQViUQlyuC54p5Kxx0
|
7251 |
mewpy/germ/models/__init__.py |
sha256=T8570UMAwDsWb4dcatgYqfArk4apLTLQFgf0sNEb2Bs
|
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mewpy/germ/models/metabolic.py |
sha256=jmJOy7BPxn1cjRnaGIUCZ_HwjzV2GjjgbwPmPwXVFa8
|
24189 |
mewpy/germ/models/model.py |
sha256=KkFIrqzPO4O7QQjni27DVyrXbqISqOp6FuSF0FOSFdw
|
41456 |
mewpy/germ/models/regulatory.py |
sha256=oNkop10vKG20LE96C076EhbJjgT50bIyftz-HiDHeVo
|
20780 |
mewpy/germ/models/serialization.py |
sha256=QABkjuTtz_8tda9Vh7eg7CmXOuX4AFD7iakx7wHnzfQ
|
23379 |
mewpy/germ/solution/__init__.py |
sha256=4ULhCdzw9TZVV3Q9p1cNwVg8fLjXTRujdCuHWG_5zd8
|
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mewpy/germ/solution/model_solution.py |
sha256=GwYxkrlN-YJfFG4NKB0ELVlZkSVRYpqm-Q5ENkxeaT8
|
25870 |
mewpy/germ/solution/multi_solution.py |
sha256=STIJh4ii44l_dMlo2vKuBGCSPZhoTEVv0Sreq1p26W4
|
7918 |
mewpy/germ/solution/summary.py |
sha256=wmsbJBtldCOoK5XJD79ZSV5c4z65DLCB253UwbyVZmw
|
1579 |
mewpy/germ/variables/__init__.py |
sha256=zNJFtvf2qxhhH-JeR6U2nU5fNW_OOYXA6yqaDRdqlVc
|
233 |
mewpy/germ/variables/gene.py |
sha256=sIYoyywN-1YLOjwdGnuCLiEv-_MjphPitTNm6yVGnos
|
7238 |
mewpy/germ/variables/interaction.py |
sha256=QRfbXqOcUIC1LGBbFFKYRxLVR0mMN6eZ_HzFQeaWVcQ
|
21681 |
mewpy/germ/variables/metabolite.py |
sha256=uEZ28O_KvmLQLX_CgJPrNWSWGvImGzafvPztWuBvwXM
|
9499 |
mewpy/germ/variables/reaction.py |
sha256=cRY5YXYdGDw-vv08ZPl-y71B41Bp7FFhEdvxPyWF2Ys
|
29703 |
mewpy/germ/variables/regulator.py |
sha256=LZd1J9dkCSca6u5Lyi-xik9zvpRBfmxGTRq86YAuVm4
|
8682 |
mewpy/germ/variables/target.py |
sha256=7k04HjCQzBMmG9ToHsJHHluee4VYeegElj9ShLeFjls
|
8461 |
mewpy/germ/variables/variable.py |
sha256=FhJFr1wlR7lVBz6qMa3FfjX4PeiU8iZFLykrN6CaRso
|
36384 |
mewpy/germ/variables/variables_utils.py |
sha256=cz2F05L9tOPWPBvxcHcijWLkCrynFlPiJiQB8jZhCrQ
|
1173 |
mewpy/io/__init__.py |
sha256=MLDJfzZVUaPQ6xBkcQBmGBEifMRXxnkGhWviepY9jZQ
|
9879 |
mewpy/io/builder.py |
sha256=UDVLknbT4ajkLcY3WQFkWBfX7SQYqxY11Nao2IsyTvU
|
1716 |
mewpy/io/director.py |
sha256=xT4I1CjYJztZHYZv8xkSWP4Xgtj7isfQLyq-nfJ6IXo
|
5909 |
mewpy/io/dto.py |
sha256=jLUrYT-19qAhT_o8uGTpnLuNZ91lGQRBRl3UJ4_EIlc
|
5879 |
mewpy/io/reader.py |
sha256=kPAhCZLk7Aoc3xRnDyupB8l4aTkNREA41xM3aoYMJTY
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5624 |
mewpy/io/sbml.py |
sha256=NnZtOBNZI8ry6H3xjn7LQFANswYO8sbHCRWjnYt3IRI
|
6391 |
mewpy/io/writer.py |
sha256=-fDxGFDZwR6o39Bcn31vP5lpgUIKVKJO_SNJtqzmuhI
|
3977 |
mewpy/io/engines/__init__.py |
sha256=slzCcuu7XDr-Xh3Sn6wrpPKaagYuGkecOAspma7BXcM
|
1108 |
mewpy/io/engines/boolean_csv.py |
sha256=3mpYRpzP__t4iao-0uPAgFk9tih1K7hrVevdKo3d_ls
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9817 |
mewpy/io/engines/co_expression_csv.py |
sha256=e48fjTF_H9AKiITqKEc5n4h_hskB8WCjVBBjRMxi-hw
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9664 |
mewpy/io/engines/cobra_model.py |
sha256=g5H4ed0z5voAiP-aix2jmDjCSV80VBVvde8RFwgAFAo
|
11346 |
mewpy/io/engines/engine.py |
sha256=vvmAJn-4qAX_Fnj7qsW71jy25x4NRuPc7fztVSUb0TE
|
5051 |
mewpy/io/engines/engines_utils.py |
sha256=g206YyptVVIemQ9JuszRkONxAMCNMlKYQBKJesyO1zE
|
10998 |
mewpy/io/engines/json.py |
sha256=QZFLbkAjSS5OMI6loXOQRHXP43W8Rlv3cjLcFiMrjNg
|
2350 |
mewpy/io/engines/metabolic_sbml.py |
sha256=gwzqtKMGg02WdKYDdflT0GWBVjv6GwAMzKlfRwgR7K8
|
40010 |
mewpy/io/engines/reframed_model.py |
sha256=KxvRxmBPdyMJL6ELhY4ikrBZiQVQcx9PKG0Za1J6Ft4
|
10680 |
mewpy/io/engines/regulatory_sbml.py |
sha256=4bJsAUYGPGTS4ElKfSR6HlaPLa_8FPeo-Ad9nRHxDok
|
36611 |
mewpy/io/engines/target_regulator_csv.py |
sha256=I-MQV0elu5S5T9qLLrjQc3WNoOF1s8uxF7i9EpF-FAA
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9283 |
mewpy/model/__init__.py |
sha256=BnhEUw61EdpRVc_2o1QO-0Klejwr7c2_RJsk_zOvBC8
|
125 |
mewpy/model/com.py |
sha256=Q-vdsgqazPVFfc_KBEFKLi61R7dab8J4BWZ_SwBDmQg
|
17753 |
mewpy/model/gecko.py |
sha256=5J7WVM5NT4mDj_qUy5FvQ_oYL1slOs_Dva4hEkm7v0U
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25432 |
mewpy/model/kinetic.py |
sha256=WnXcjznTcmHqUV4upAG3LvqGs3pXO1wG2gurUYZ7DEo
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26193 |
mewpy/model/smoment.py |
sha256=eCyOWoqVX3I9r3Lh8m5suvk53NkWzDohEd_zBqbSmQA
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2297 |
mewpy/model/data/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
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0 |
mewpy/model/data/ecYeastGEM_multi-pool.xml |
sha256=_9_01tnFnqC4pIoiw-3vhA69C1FJfa9kenHK33PDkMM
|
6261715 |
mewpy/model/data/ecYeastGEM_single-pool.xml |
sha256=4aWMf4JV8DFlI7hrx5Q9vRWaFhauNcCEBsMWTnhXYf4
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6379721 |
mewpy/model/data/proteins.txt |
sha256=x_n_TmexgdyTyG1knluFu_HdKheJpFRMb9YRPC4CJQs
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183816 |
mewpy/omics/__init__.py |
sha256=EQx5qDEAKo7GB0z38ncoX1jMa_xfattEBc_Om-rl6P8
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mewpy/omics/expression.py |
sha256=GXfR1UXv56EgprlUonMDNGzIB1KUSu2anbVz05qbx2A
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18683 |
mewpy/omics/integration/__init__.py |
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mewpy/omics/integration/eflux.py |
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mewpy/omics/integration/gimme.py |
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mewpy/omics/integration/imat.py |
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3703 |
mewpy/optimization/__init__.py |
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mewpy/optimization/ea.py |
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mewpy/optimization/settings.py |
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mewpy/optimization/evaluation/__init__.py |
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mewpy/optimization/evaluation/base.py |
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mewpy/optimization/evaluation/community.py |
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mewpy/optimization/evaluation/evaluator.py |
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mewpy/optimization/evaluation/phenotype.py |
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mewpy/optimization/inspyred/__init__.py |
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mewpy/optimization/inspyred/ea.py |
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mewpy/optimization/inspyred/observers.py |
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mewpy/optimization/inspyred/operators.py |
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mewpy/optimization/inspyred/problem.py |
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mewpy/optimization/inspyred/settings.py |
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mewpy/optimization/inspyred/terminator.py |
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mewpy/optimization/jmetal/__init__.py |
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mewpy/optimization/jmetal/ea.py |
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mewpy/optimization/jmetal/observers.py |
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mewpy/optimization/jmetal/operators.py |
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mewpy/optimization/jmetal/problem.py |
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mewpy/optimization/jmetal/settings.py |
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mewpy/problems/__init__.py |
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mewpy/problems/cofactor.py |
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mewpy/problems/com.py |
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mewpy/problems/etfl.py |
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mewpy/problems/gecko.py |
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mewpy/problems/genes.py |
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mewpy/problems/hybrid.py |
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mewpy/problems/kinetic.py |
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mewpy/problems/optorf.py |
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mewpy/problems/optram.py |
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mewpy/problems/problem.py |
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mewpy/problems/reactions.py |
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mewpy/simulation/__init__.py |
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mewpy/simulation/cobra.py |
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mewpy/simulation/environment.py |
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mewpy/simulation/germ.py |
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mewpy/simulation/hybrid.py |
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mewpy/simulation/kinetic.py |
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mewpy/simulation/reframed.py |
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mewpy/simulation/sglobal.py |
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mewpy/simulation/simulation.py |
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mewpy/simulation/simulator.py |
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mewpy/solvers/__init__.py |
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mewpy/solvers/cplex_solver.py |
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mewpy/solvers/gurobi_solver.py |
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mewpy/solvers/ode.py |
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mewpy/solvers/odespy_solver.py |
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mewpy/solvers/optlang_solver.py |
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mewpy/solvers/scikits_solver.py |
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mewpy/solvers/scipy_solver.py |
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mewpy/solvers/sglobal.py |
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mewpy/solvers/solution.py |
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