metator

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1.3.8 metator-1.3.8-py3-none-any.whl

Wheel Details

Project: metator
Version: 1.3.8
Filename: metator-1.3.8-py3-none-any.whl
Download: [link]
Size: 652615
MD5: b3689619187ba72938b8ca4d45455af9
SHA256: 30421323d137ea882040ee233745b0219cfe448b932375db1eee6c323868bbac
Uploaded: 2025-03-01 00:15:16 +0000

dist-info

METADATA

Metadata-Version: 2.4
Name: metator
Version: 1.3.8
Summary: A pipeline for binning metagenomic datasets from metaHiC data.
Author-Email: Amaury Bignaud <amaury.bignaud[at]pasteur.fr>, Jacques Serizay <jacques.serizay[at]pasteur.fr>
Project-Url: homepage, https://github.com/koszullab/metator
Project-Url: documentation, https://github.com/koszullab/metator
Project-Url: repository, https://github.com/koszullab/metator
Project-Url: changelog, https://github.com/koszullab/metator/blob/devel/CHANGELOG.md
License: GNU General Public License v3 (GPLv3)
Keywords: bioinformatics,metagenomics
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: Unix
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
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Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 12872 characters]

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entry_points.txt

metator = metator.main:main