loqusdb

View on PyPIReverse Dependencies (1)

2.7.12 loqusdb-2.7.12-py3-none-any.whl
2.7.7 loqusdb-2.7.7-py3-none-any.whl

Wheel Details

Project: loqusdb
Version: 2.7.7
Filename: loqusdb-2.7.7-py3-none-any.whl
Download: [link]
Size: 50303
MD5: 4954a73cd175d2d645799759129ff6b6
SHA256: 7b8a9b230df716d53cc65fb0f3ff6cfcf5f3c7d69ce3a77038ae039f28812666
Uploaded: 2024-07-17 11:26:15 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: loqusdb
Version: 2.7.7
Summary: Store observations of vcf variants in a mongodb
Author: Måns Magnusson
Author-Email: mans.magnusson[at]scilifelab.com
Home-Page: https://github.com/moonso/loqusdb
License: MIT
Keywords: vcf,variants
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Unix
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.7.0
Requires-Dist: pytest (==5.4.3)
Requires-Dist: cyvcf2 (==0.30.12)
Requires-Dist: mongomock
Requires-Dist: click (==7.1.2)
Requires-Dist: pymongo
Requires-Dist: numpy (==1.21.4)
Requires-Dist: coloredlogs (==14.0)
Requires-Dist: pyyaml (>=5.4.1)
Requires-Dist: vcftoolbox (==1.5)
Requires-Dist: pip (==23.1.2)
Requires-Dist: setuptools (>=70.0.0)
Requires-Dist: mongo-adapter
Requires-Dist: ped-parser
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 4798 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.43.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
loqusdb/__init__.py sha256=-Aely8DNlyshaqijJY256EyizUwcePFgiX6lXJcfBQc 1758
loqusdb/__main__.py sha256=8FGKySAGaWSzAYMj6HRsxeyiME3V01Idt7HrmN7pSYY 397
loqusdb/log.py sha256=CDcrCjzs9ef-d5Wg8Q_41bCOZRM5j8PyP06kNcynTj0 1691
loqusdb/build_models/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
loqusdb/build_models/case.py sha256=P3sfQkI_fH8u5iqecYWhV866lcHz4upWkepaea5MMIw 4255
loqusdb/build_models/profile_variant.py sha256=TbSxfVjESstS_FgbkOW4NQwMQVeTyhn9oc9yPZmDhzI 1021
loqusdb/build_models/variant.py sha256=LviEaovB_s_-jaLM64x0NzqzilFr__NPgv4Vf49Rhbk 6939
loqusdb/commands/__init__.py sha256=BXAN3UADgqPrkGczzjlLO9GyyQ96dnLnP7n92JlYHgo 603
loqusdb/commands/annotate.py sha256=748kImopE5WbaO1nuv3WUgIqezWFSsi7SBeWhOz26-s 1384
loqusdb/commands/cli.py sha256=wJD5S1BoCxtRTAobd1QtmQpzlngJg-mt1nsyD92fDD4 3176
loqusdb/commands/delete.py sha256=R6ysHKSMw1mmL4ZbktoUIKzdzDLQ3314YPYhIy1myic 1979
loqusdb/commands/export.py sha256=-9SHgvr0G8FlyW0FGSfe1dmNDnjx4HKAaa-xYzSkvNc 3238
loqusdb/commands/identity.py sha256=KLA9c8e6cJFDxtqIa1G6zdHTHK1sz2b3v1Utdtik_4k 787
loqusdb/commands/load.py sha256=cVDdY7meBfcv8nMEGsjAX6aE-SKDOceGqM2vAvXPhko 4407
loqusdb/commands/load_profile.py sha256=cflCbF9f77_HCH8xPnN8zSSocvIffRMnC2LPE0j7Xq8 3336
loqusdb/commands/migrate.py sha256=2C8YL-zVqnpnqg3JIyUr0rbVnb8-AGPVWNhicHnPKLo 667
loqusdb/commands/restore.py sha256=eqPX0yao0IAYS5SbjCdlsfSJRBbRByBLISUU2hTzqqs 1492
loqusdb/commands/update.py sha256=zz3wueaJVqJ1FKact-rpY2az__5oa1LnZKf7mgqNGPk 3211
loqusdb/commands/view.py sha256=kQ_HuFhIX5wTHoEFC6atH-5unQFkRtopzD2_GqHNPKY 5198
loqusdb/commands/wipe.py sha256=WTOjyNooCUhtmZ6pdcPFa0PZrFc9E_pkLbnat_zP96M 553
loqusdb/constants/__init__.py sha256=r6y2TN8BqbKuh2Uyxq0trh-3A9xiWeStqWlvEPp-rSA 1645
loqusdb/exceptions/__init__.py sha256=Fq0UQg9TepWh19D7WT3dARyAHvorwJF6phhnZi2AkxE 88
loqusdb/exceptions/case.py sha256=n3mGF7RIc1imQFxnNJ1TWxeJeMWN4MHsKxoZb0m1-Os 92
loqusdb/exceptions/profile.py sha256=TVkRXh3ZbkNCmFHzZTCuhPP3iFWBwP1YQGD8IlSoCTo 98
loqusdb/exceptions/vcf.py sha256=QMpr9oRzYtMaHzP8wtSU5HiXGmi4k48YnjCilNZ0j2M 95
loqusdb/models/__init__.py sha256=yf0wONlDuGkztsOv15BFulYyQxdzqhuUKpL-R_clDVM 139
loqusdb/models/case.py sha256=EJOkrAMJfS6eID3E7QtWkoa_tMMf21KV3Z5B-U0c-Wk 1660
loqusdb/models/identity.py sha256=3DBlaZtrEtoiSU6nMXs7zY-mvy-9ew08-ZPjr_F3x3c 511
loqusdb/models/profile_variant.py sha256=7Y7HRnoOfhvThAuuaXWe2tOr0u2wktSFr5GmoLuDhg8 409
loqusdb/models/variant.py sha256=9QpM0ojJ24tKY9RrcgC411Wjnl3uRUawVYo6RWz1gXY 1068
loqusdb/plugins/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
loqusdb/plugins/mongo/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
loqusdb/plugins/mongo/adapter.py sha256=rRUQ2y_bZwjINbdTtfzJ_1JwE0Ns0usyAJ3o0O1Y10I 2593
loqusdb/plugins/mongo/case.py sha256=zKnaaam8Ey1AEH-1GofXp6iNqgmSvWWxZZWsx7dAO0Y 3006
loqusdb/plugins/mongo/profile_variant.py sha256=madOBa3HacIN_T1V8mp7NEC4QOpqQBqSY6pKTObkMLA 600
loqusdb/plugins/mongo/structural_variant.py sha256=RPc3GF37-O3GqRS9Z5PRxsBXACljfRT4KFsrEl0jCu0 12955
loqusdb/plugins/mongo/variant.py sha256=NS3N8bhRap1b2ZSGjOw2LO6l7q_CzD00GZs499l38Tg 8715
loqusdb/resources/__init__.py sha256=JOx3Ppgtghx55cOJN0bfBonSXM5DM_v0OFdlT-Qybg4 639
loqusdb/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
loqusdb/utils/annotate.py sha256=cPNWlhsv6yoe3lxNfa9DytO5eACuM_mOJJw_mglVMN0 2646
loqusdb/utils/case.py sha256=aeTvyACJTDjzl-aOjAZaUzFMLisgFKMfcoXSvNAZz4s 2168
loqusdb/utils/delete.py sha256=-ddBM_QXKzlUN6egEJggKzXX1P-WEdi92HgaD1DJRtg 4843
loqusdb/utils/load.py sha256=rujUk89lL5jO35QfO8NKGJkjEJmN6PQxohKkxtpnw6Y 8252
loqusdb/utils/migrate.py sha256=9Q6kdIi9TpFVzDYptlEE8RqPPS5wyzfM3F8egzmmBBk 1113
loqusdb/utils/profiling.py sha256=3OizF7CpYvSl9kyl2g4KGJxbIRUqWfmfLxn3843XYDk 9164
loqusdb/utils/update.py sha256=1edJG-u24FgOSxyXAQEiyTG4IyK-Uo3lSIl5qyzcXsI 4433
loqusdb/utils/variant.py sha256=Lq5x9egVB-3rExBiRceF67TaL4Hp2gGoWMSRBEcnm4Q 2088
loqusdb/utils/vcf.py sha256=ybmrTBEPYa0FbUXo8ttlwATk13RnKjX9eIDbRDwCiVE 5175
loqusdb-2.7.7.dist-info/LICENSE sha256=urpFcJXw3elN9kV2fFutc-lXegjuu2lqP_GSy8_CAbs 1054
loqusdb-2.7.7.dist-info/METADATA sha256=GaJfNgMpj-5LP68vCgjKrBGfRScPomzR6leTDExQHT0 6007
loqusdb-2.7.7.dist-info/WHEEL sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ 92
loqusdb-2.7.7.dist-info/entry_points.txt sha256=39QklW01vy9ilBLcRPgCP18kN6oKXXLoOK50gZE7Jbs 59
loqusdb-2.7.7.dist-info/top_level.txt sha256=lRdRO6hqPhJEjFhfNsbCgVWMztvkYsjiOGK9DAL0UAI 8
loqusdb-2.7.7.dist-info/RECORD

top_level.txt

loqusdb

entry_points.txt

loqusdb = loqusdb.__main__:base_command