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lbster

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0.0.3 lbster-0.0.3-py3-none-any.whl

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Project: lbster
Version: 0.0.3
Filename: lbster-0.0.3-py3-none-any.whl
Download: [link]
Size: 907640
MD5: c620ca8d74b08a581ed51e938d5679de
SHA256: 319112d9b84ba6eab7a1fb98f4f03f8e2010ea20deab0c9a6ff848c2ccecbeec
Uploaded: 2024-11-14 18:13:52 +0000

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METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: lbster
Version: 0.0.3
Summary: Language models for Biological Sequence Transformation and Evolutionary Representation.
Author-Email: "Nathan C. Frey" <frey.nathan.nf1[at]gene.com>
Requires-Python: >=3.10
Requires-Dist: lightning
Requires-Dist: torch
Requires-Dist: torchmetrics
Requires-Dist: biopython
Requires-Dist: torchvision
Requires-Dist: universal-pathlib
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: pyarrow
Requires-Dist: s3fs[boto3]
Requires-Dist: biopandas
Requires-Dist: wandb
Requires-Dist: hydra-core
Requires-Dist: torchdata
Requires-Dist: datasets
Requires-Dist: tokenizers
Requires-Dist: transformers (>=4.24.0)
Requires-Dist: scikit-learn
Requires-Dist: matplotlib
Requires-Dist: seaborn
Requires-Dist: python-dotenv
Requires-Dist: torcheval
Requires-Dist: fastparquet
Requires-Dist: datasketch
Requires-Dist: peft
Requires-Dist: icecream
Requires-Dist: captum
Requires-Dist: pooch
Requires-Dist: edlib
Requires-Dist: onnx
Requires-Dist: onnxscript
Requires-Dist: beignet[all]
Requires-Dist: fair-esm
Requires-Dist: mypy; extra == "dev"
Requires-Dist: pytest; extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: ruff; extra == "dev"
Requires-Dist: ipykernel; extra == "dev"
Requires-Dist: selfies; extra == "mgm"
Requires-Dist: rdkit; extra == "mgm"
Provides-Extra: dev
Provides-Extra: mgm
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 9007 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.5.0)
Root-Is-Purelib: true
Tag: py3-none-any

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lbster-0.0.3.dist-info/RECORD — —

top_level.txt

lobster

entry_points.txt

[console_scripts]
lobster_embed = lobster.cmdline:embed
lobster_eval = lobster.cmdline:eval_embed
lobster_intervene = lobster.cmdline:intervene
lobster_intervene_multiproperty = lobster.cmdline:intervene_multiproperty
lobster_perplexity = lobster.cmdline:perplexity
lobster_predict = lobster.cmdline:predict
lobster_train = lobster.cmdline:train