jcvi

View on PyPIReverse Dependencies (0)

1.5.1 jcvi-1.5.1-cp310-cp310-macosx_11_0_arm64.whl

Wheel Details

Project: jcvi
Version: 1.5.1
Filename: jcvi-1.5.1-cp310-cp310-macosx_11_0_arm64.whl
Download: [link]
Size: 1126489
MD5: 530b9c114808b30f37d67a8976220669
SHA256: df203ba742cc06b9689ae4c9e104d014d7e212d795639961937e8968938cd741
Uploaded: 2025-01-29 03:40:35 +0000

dist-info

METADATA

Metadata-Version: 2.4
Name: jcvi
Version: 1.5.1
Summary: Python utility libraries on genome assembly, annotation and comparative genomics
Author: Vivek Krishnakumar, Adam Taranto
Author-Email: Haibao Tang <tanghaibao[at]gmail.com>
Project-Url: homepage, http://github.com/tanghaibao/jcvi
License: BSD
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.8
Requires-Dist: biopython
Requires-Dist: boto3
Requires-Dist: brewer2mpl
Requires-Dist: crossmap
Requires-Dist: cython
Requires-Dist: deap
Requires-Dist: ete3
Requires-Dist: ftpretty
Requires-Dist: genomepy
Requires-Dist: gffutils
Requires-Dist: goatools
Requires-Dist: graphviz
Requires-Dist: jinja2
Requires-Dist: matplotlib
Requires-Dist: more-itertools
Requires-Dist: natsort
Requires-Dist: networkx
Requires-Dist: numpy (<2)
Requires-Dist: ortools
Requires-Dist: pybedtools
Requires-Dist: pyefd
Requires-Dist: pypdf
Requires-Dist: pytesseract
Requires-Dist: rich
Requires-Dist: scikit-image
Requires-Dist: scipy
Requires-Dist: seaborn
Requires-Dist: wand
Requires-Dist: webcolors
Requires-Dist: mock; extra == "tests"
Requires-Dist: pytest; extra == "tests"
Requires-Dist: pytest-benchmark; extra == "tests"
Requires-Dist: pytest-cov; extra == "tests"
Requires-Dist: pyyaml; extra == "tests"
Provides-Extra: tests
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 8829 characters]

WHEEL

Wheel-Version: 1.0
Generator: hatchling 1.27.0
Root-Is-Purelib: true
Tag: cp310-cp310-macosx_11_0_arm64

RECORD

Path Digest Size
jcvi/__init__.py sha256=LPZg6Tj-dQ2S8vQgN2cYYz7zXZOhlN6fu09GLddrsaQ 607
jcvi/_version.py sha256=W6YuN1JOd6M-rSt9HDXK91AutRDYXTjJT_LQg3rCsjk 411
jcvi/cli.py sha256=s8NMCnEeXUUfJnhWS-zaBj15a3cnx-L5KOagKrvXVSg 279
jcvi/algorithms/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/algorithms/__main__.py sha256=n6xrFr6WuAtXdvmpdXVYAA0CHtnmZoKVi2W5jtntHSY 263
jcvi/algorithms/ec.py sha256=FHrRJFBdK0gKgRQqxb8p-bK0jP8gazkxIpmf_Q-yq54 6421
jcvi/algorithms/formula.py sha256=i1VOFlAScjV5prm5ydI_2oFopNEIQ1zyoLynNzZh3YA 6412
jcvi/algorithms/graph.py sha256=Gbqcc0W5-bZh1DPB-jLve-EgoCYE181l1fFq5NlIeoQ 14137
jcvi/algorithms/lis.py sha256=4rh0LenijOt3MNn4uEOElk-NjNM_ymAH6bGmxqz9Z10 6275
jcvi/algorithms/lpsolve.py sha256=k3KbxrNvs7VRz9TLw2IbOZQnjrZaYcM8GKAqGydXHko 24107
jcvi/algorithms/matrix.py sha256=KRniMkpDEtRpqSKVmNNiagvWuIF761IzZaZYJb54QJY 6102
jcvi/algorithms/maxsum.py sha256=8Uvw2Qwq4Js55-CGvyeKZ1MWNJqme_3syqLSx09Riqo 1296
jcvi/algorithms/supermap.py sha256=sj9wvxTNcCY1oUT3SHSZOPs4Oh_8WlrmJqJupvnwLhQ 4978
jcvi/algorithms/tsp.py sha256=u-rYX2Og9oM0yunHnjVNg9a8mjpJS3hmqzoVSd8Qn1A 12550
jcvi/annotation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/annotation/__main__.py sha256=KY3waLX4lcUXuGoaeEbV5oDYgQjj9zoBuWbOFDUuA8c 258
jcvi/annotation/ahrd.py sha256=E2nQHWwfJdR5OzDULPmiDMJDragJt6udh1DMCSwDYjg 21401
jcvi/annotation/automaton.py sha256=DPWPmQJTTjKvXVKASCq-UF5Bmk_QoUx0elNYmsGOIKA 7917
jcvi/annotation/depth.py sha256=Re3KCVpqWFQG2Jf0Sno0WN2aGgn4_YPkBU-qnda-SZE 6382
jcvi/annotation/evm.py sha256=ZoAbSgMrOBvmTEogC6TvBvVJlxBotPSNrIlpeztrxbY 7033
jcvi/annotation/maker.py sha256=GuRLstRFHDgITDpZu2BVZrDPpWm_MMBpelniL4O6Vnw 14642
jcvi/annotation/pasa.py sha256=OEWAF51nTZhg8DffjmOHftLJxtenwqUkGhwX0g6w1mQ 19482
jcvi/annotation/qc.py sha256=PkvISKSAEE-YbYyvya8_rUCIwkPg6nuseohzeBkIrhk 12807
jcvi/annotation/reformat.py sha256=GUtj4Io1k2mDNYADSe6xEkrDeruNFYuan1TAxe_DAv4 42705
jcvi/annotation/stats.py sha256=-TFgkkPgqdBGMBwHiqQaaViIpt0qkXTRPn-1dc_iY-4 12632
jcvi/annotation/train.py sha256=y5npy8vRnvi6avS0GPg98lpxwAxb6LbMB2eB8X30OIw 6781
jcvi/annotation/trinity.py sha256=KvGYOlRxr2f6eIOzRuAE_-Y2HadOU9rhE84XrFt89f4 5040
jcvi/apps/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/apps/__main__.py sha256=EO9QbBSlZLTJ2p6UoAafDsMPCn2QPjrjcOZhziQmhN8 249
jcvi/apps/align.py sha256=R8mo5nbU_IEzqSCbSly2fXcYZ_4RAip9zs8m1iVo1Vk 20394
jcvi/apps/base.py sha256=Ni-fCAxm_IPbVsfVzwitUK4V9RORKsvh7_ySqiqRT6o 67255
jcvi/apps/biomart.py sha256=qM_aHuouky41cJmN03fbKPXGoVjiOSLtorJ6YBptr-o 12249
jcvi/apps/blastplus.py sha256=IYpd5TFdNshHZrOPBR_w0jS6tmLAhwvfPVARo_saGgs 3516
jcvi/apps/bowtie.py sha256=xYCTT6RYUHcifMa0eNty2xhBslS8k7KRUjI8xn-wcjE 5209
jcvi/apps/bwa.py sha256=uaXof1bod8Nl57mw9AfyLL7ZChteIBAOyEVnePyNM7U 7676
jcvi/apps/cdhit.py sha256=njHj0BNRECc21kW7s3yxwHCi2si9H41HMZ9lIL0Fzjw 7222
jcvi/apps/emboss.py sha256=hi3Idg4UTLqZO6EZvV7pZwcixeMojFBqYHOsIeGb6M0 2611
jcvi/apps/fetch.py sha256=RGfbKANliJV_xLs8HAdkWbwbA5CMn1x82Ne5SMPMpcE 21317
jcvi/apps/gbsubmit.py sha256=frJD91zpG1ahnPXe0hu0YkByVyB6okywDUfRzie-5xs 19442
jcvi/apps/gmap.py sha256=8YRQ5_1wTNZap4uDBhc7f5bqxTc1lUNv1N8xnOyJMLQ 6881
jcvi/apps/grid.py sha256=Y9LBNF6X_4024EQKrRl6WABEVxutmSIbmUbnjuh2v-w 18428
jcvi/apps/lastz.py sha256=RAHP-am6PhrAmuzuley0HhBQ9FWRa844c3Lp0siEpU0 7214
jcvi/apps/mask.py sha256=MYJpFM1kNQh2DP1VdAwTok9_4MyiqJPUjpC-x2trnUg 2992
jcvi/apps/phylo.py sha256=Wz_MQ2AxfNcwWWb3aRaTwp11U6a6rG_ahhii0j82NbE 35466
jcvi/apps/r.py sha256=h4fWHu88L74AVEvakNbdKHMv3um-Y4w5fmsucm6jEWA 1854
jcvi/apps/restriction.py sha256=gNmTle2Ia_Uw3rDKhZR3x-1B2Rbov7Be7_11-JFP34M 4873
jcvi/apps/softlink.py sha256=CfHXTxSnMNPf2Py9zhNiOyL7QyTLIP2oqy29Gf-ABvs 3767
jcvi/apps/uclust.py sha256=F_LekZAmQdcrKRbNUGZsYT_PYS4-9SguKyt4u0xCLrA 32970
jcvi/apps/uniprot.py sha256=HW5dAF8SANMcvQsodDsQ_Mbu4Sst_AivTREaeBN6dx4 5194
jcvi/apps/vecscreen.py sha256=oUQEoqctTNFDIO5R0AlCAkI1Ljy9SGkpP4e3aRgWdkk 3636
jcvi/apps/wga2ribbon.py sha256=ZPYetrMoCeTbeO_MdOE6JP8eIDthThTAw2kwmXOvkEM 13211
jcvi/assembly/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/assembly/__main__.py sha256=eYPjmwRDhDQyw86mpJ7MattxL9QnYybprGjVVgBvnSU 253
jcvi/assembly/allmaps.py sha256=6EWsgQoiOoEUcaS7NFGfJSD9WRtXKWeAaUmCH1hY0KI 65564
jcvi/assembly/allpaths.py sha256=Ro-kuN2dtmsA_dzxfkcuLCwqXbi-5qxcWVuoRin7G9A 15410
jcvi/assembly/automaton.py sha256=uTpeB-KpgHMzWsnjjCjZqA1oA_03qlOceIEpWlbzJf8 13237
jcvi/assembly/base.py sha256=yju_L3wBgJGRcKa5sFTJz3Srbs0KDhx93UNycRce5vA 5535
jcvi/assembly/chic.c sha256=8u8qb3U-Xz3F57v6q2m9sw416CR6I4hl0bro-4Yr51E 559927
jcvi/assembly/chic.cpython-310-darwin.so sha256=MZpENzJDVcJRs4KCWAOCJ0xXPj5Szyxuh49qDhoDdCM 112120
jcvi/assembly/chic.pyx sha256=GO306Z9HBnGoelhnRF6ZgQ9bEw5zTSDiPKJ7q7DeX-0 3455
jcvi/assembly/coverage.py sha256=7RYBimZUieKPSU9MEN9yi1t0WInlCzUFzSJoZa_QHUs 4544
jcvi/assembly/gaps.py sha256=aulaDTnzIkxzd5n6U8gzaTQ7Pf32wFtWii9BGQosKnY 8650
jcvi/assembly/geneticmap.py sha256=Vj0qCQ56w2hPA3J3m9dkRYia0B4CpnWyCTtVleUmIPU 19984
jcvi/assembly/goldenpath.py sha256=bC2Qo6UtQOKQ06IslTo0KqlkdlWrABIDc8i-uVgQCPU 34648
jcvi/assembly/hic.py sha256=NCXK2U30oSMLLlI1solZ8XZPC9NrD0S_5RWG7UNrLjE 56163
jcvi/assembly/kmer.py sha256=S20qfk6GWrdxEA4luzMgmAZ5_nnHA_fSxT5yVfVwzgw 42841
jcvi/assembly/opticalmap.py sha256=a2dAcGVDQAek1iNwb5arRKhwzSGBj6ssEcJ-bm4tNBY 12475
jcvi/assembly/patch.py sha256=Ds59rrv_JrMPp7n1_WGb-DbspTXHPGX-d4em2jlNkF0 27263
jcvi/assembly/postprocess.py sha256=tauaAoTYnvvz23CwZCc_SaWQcBDNJxlIRG0qDKXiDlc 15706
jcvi/assembly/preprocess.py sha256=2LQIxG25FIXTVsUTDR30xoD7fH3oSsIX5ck1dMA-myQ 21487
jcvi/assembly/sim.py sha256=9Pvc3ckCXDTzgjntm7qeDdFppXtJ1bCDTCgxWKmJkt4 6275
jcvi/assembly/soap.py sha256=enmkKRxNO7-h8Gwgl6mbNy2LJj89bimScUCrXhPw4Es 8836
jcvi/assembly/syntenypath.py sha256=2LpH49N8ZV4-g5fG8Z1PNIJHfPaXhuB0duOPwpofWSU 16154
jcvi/compara/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/compara/__main__.py sha256=Yol0Kp6KNjdZaOkNkO2SazhjKtxXjqaqY2oQNd4s7O4 247
jcvi/compara/base.py sha256=1g4Twp0ksnK5z1l8ctzYofNFBsucX8n8yspTC5vJK-o 4981
jcvi/compara/blastfilter.py sha256=u4YhCrlyQqYHnK4nAPuyA7iS5eIxwC2O0FXVbBUzhcc 9778
jcvi/compara/catalog.py sha256=fpp9oekPdJAhb29sksAIT1gWOkHcI9UjyZXKvSPQqLY 28362
jcvi/compara/fractionation.py sha256=S91I9Yyqr2g-yLiG5XqnZ9bSk6sw0fL3uIpYS2EqByE 26317
jcvi/compara/ks.py sha256=CiMykwtm4TDLdnO2LaWAv902blsH7PArPg9vgdAv0fU 33949
jcvi/compara/pad.py sha256=E7QSFFXdzzHG82ahGWSwNSwt0GoCXQy0SIP-B8ksets 9189
jcvi/compara/pedigree.py sha256=dMynuAbME0rnrxw-D5c4QgY5uQURBbLCaqePdotyl10 8324
jcvi/compara/phylogeny.py sha256=0qn3lp5q98jHNGLUa0HSckeqHg04_5-DfL90oOKd6RM 3048
jcvi/compara/quota.py sha256=UN7yiX2tGU50GIQh8jf1EA6XOYNoknoeSXVikDWJQHE 7933
jcvi/compara/reconstruct.py sha256=2mAOERKBjPPH9I4a7NTIsBpSSJZSq5seF7dp2hbge4U 10310
jcvi/compara/synfind.py sha256=cZ9A86t__NJkfCt-Q4hmf8krmQKfk5j9v_TahALy_hA 9136
jcvi/compara/synteny.py sha256=qDZOjYlPDVaSBjtCwWcClKEz8Xq2QJW0PUSu5hF8q2M 57647
jcvi/formats/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/formats/__main__.py sha256=31-kJnR910t_lTyV6MRQ9bEP11GGf-PQ2aVc3OUIP5Q 258
jcvi/formats/agp.py sha256=DoeToNzAh-34q7Na8tzPzfw8xMYbdKrO3_stdzm_Jn4 63399
jcvi/formats/base.py sha256=yDLixiL5I7GkP9hQh5125QDLa78542DFC8s01kVFEdc 33946
jcvi/formats/bed.py sha256=M3k8kpIELCFdtyC-AmEgGhy5bE_ANX3Vfa1l9TIQ5jk 71801
jcvi/formats/blast.py sha256=QPnoO6o2dchwALIwSc_n3tF5OxBlqYG4WNfehUjaY_4 43156
jcvi/formats/cblast.c sha256=rTSt5Lk8b0AG0DMhh6MSnXGLJL9wQmsH9QIeE1v3xeI 680961
jcvi/formats/cblast.cpython-310-darwin.so sha256=eQ4VgF2x8uf1kIvqb6zZwWH8w-SJww2ZUOExClMKf74 139728
jcvi/formats/cblast.pyx sha256=hMpDjyD1P-YmPTwE2AVciweU_DRhj7IO8aEtU0TVZSc 7010
jcvi/formats/cdt.py sha256=cC87wNvYOlJLhnPUDQ8BBcBD3tdQZzvFWBryTuVFrjM 3154
jcvi/formats/chain.py sha256=63pFTCSjmQpYDFsVixRNL9NETEUjxtt6WkRKxKsXAxA 8523
jcvi/formats/contig.py sha256=3py95hpt33Rs6gK_c7h3VFuQG6RmaLejIvAn9joSJ3A 4604
jcvi/formats/coords.py sha256=1-foJjnZYY7ZsYIcDoTDuQeYwFPu60zr1EZpnVuBcr0 15158
jcvi/formats/excel.py sha256=fQJrEpgw5d1rHdQGN2AIftoVmYr5dEExjNZzdfaCWjY 6516
jcvi/formats/fasta.py sha256=wYoGk5iNjiAJ28PrGx_iV1JNC1YXc1PZNSKWljqEiYk 75599
jcvi/formats/fastq.py sha256=LvWdRg8YXMcgXtd7gz6QadHHAcmRvJSfaBcaf9SRyTQ 29570
jcvi/formats/genbank.py sha256=y-kApRZ28ajgnB2tc0bEU1HnrBOWhBj9MKhFK4BNvDw 15492
jcvi/formats/gff.py sha256=1fd5okgmolHLdHgYpHk89emHm5Vllqrn7Qy1UEQJDY4 119849
jcvi/formats/html.py sha256=s2-_xSyn35zUZfzfEsCYzCDgwDC_W60-FgMzoXkzP98 3962
jcvi/formats/maf.py sha256=zPPYObfmE0EwEzJfd5MlMvnYP_aghD3OaEVt5ukPLZI 7645
jcvi/formats/obo.py sha256=G4nMkuvV39BWi155o_8yIcyE2gXP9w-tb4n3FiZhjtc 2816
jcvi/formats/paf.py sha256=u2-DlK6TKoA8RrjMf5rZZI-Joj3wDCf_ta-nNLbxt70 2880
jcvi/formats/pdf.py sha256=tvrJxZCjdCZyBwBzvD6-Z0GkkToWDBZJH9TgdzwnoF8 2915
jcvi/formats/psl.py sha256=OnVp2sndoM_vnWFzN8gtEE2dvI8utfai2k2ec-89VEI 10322
jcvi/formats/pyblast.py sha256=4y7caS4h2WL0a00DuoRnPKlAdSBxZnND7HaVx8rAssE 2746
jcvi/formats/sam.py sha256=dG2l3p4JTzY6tioaUfeP2Xu8j1t0yWmBERGOV7MMQTk 28185
jcvi/formats/sizes.py sha256=uu2vvKLV0NfphuEMpHr8-wetE34NFcSe8290ImqJIWs 8007
jcvi/formats/vcf.py sha256=i3pg5B9OLIIXK2rx0TfQIpsC86lSprDuEwhvACp1zsg 25449
jcvi/graphics/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/graphics/__main__.py sha256=zzIutMG9khmPLy6lEDOxNt7zhEUmI7p92z7xU0UsYMg 267
jcvi/graphics/align.py sha256=VVn5Rd71uMmMaFUgMvM-RsMJCvxvUPVcuWbgxi_Kd-8 16152
jcvi/graphics/assembly.py sha256=VsN_w2wiFF19U2kY_IibjIR3bElhpBCMuUokNmDVG2Y 15231
jcvi/graphics/base.py sha256=asXOgHCwAbqadokMTrrpcETlDAWZHT6_qqnfIZHr67U 26130
jcvi/graphics/blastplot.py sha256=6JjblwOO7fpUBU8JGSsjtKUllFxhvogF7NO8SK6hu4Y 9984
jcvi/graphics/chromosome.py sha256=7zuqLZE1Di442t4zUFj9THNe-f_w4TNiT0gpoxsk4tg 22281
jcvi/graphics/coverage.py sha256=qntRCPbE8Iw0xT2WmLBJbxSZJNFkbrMNdMpMDOu0PkM 7097
jcvi/graphics/dotplot.py sha256=LMM6-5DC9hxpL9m4xeYIWV3nA5Sm2Z2Tl8lShCTlVQ4 15115
jcvi/graphics/glyph.py sha256=VUSaF8R0OcuGj5i-g-63YWGATrkc4iFhpbtST4wH1R8 21777
jcvi/graphics/grabseeds.py sha256=dilFA9D5UVGxX7tDlM-kn-dSj0HGIF4pAoBXr1z--os 27665
jcvi/graphics/heatmap.py sha256=G-UXWW-OTXKwW8y07ExwT_dFWdaF_eBGUgOeGJ5s3uM 5017
jcvi/graphics/histogram.py sha256=0JxpxjVCITtI0JI_3p7uFWn1_OkRfA0gKR-kPWEG7qA 9589
jcvi/graphics/karyotype.py sha256=9NBKfWM9wFNXJYU49IMLlrOOLooFdalV5hf_gH8lyIE 13580
jcvi/graphics/landscape.py sha256=j9DKnxAELY9DmhOTzdmUxRd-IhWeC5Bj1VTGgpNeI7s 37193
jcvi/graphics/mummerplot.py sha256=Z5tMK8UoGDIYufveSAkFY3vD29nh8XYsMYwS8SYUXgA 3862
jcvi/graphics/ribbon.py sha256=OMkMliiWlRoJCEiaWhUzFYFbIvK8LoBd_QL8XI2FPPU 30567
jcvi/graphics/synteny.py sha256=z8FN5RPNhmHq4KAkd7TJwXKgMj1hMO7_U_mp7EdJULA 22479
jcvi/graphics/table.py sha256=LmTWLQXyQVowPN5ydk58aTfBIeKKwKDnOiUt9q_Ffc4 5459
jcvi/graphics/tree.py sha256=LmawKQSXJ2EmU9fYrancotMNzRWr2iQuu6uQVpFRozg 20335
jcvi/graphics/wheel.py sha256=vs8CSSFMaiOtO2ubibDldxVyextcIloEEMnYKII0gxk 6182
jcvi/projects/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/projects/__main__.py sha256=xl1sdqpylSxAXksv8tXvXIKRXxOq4sOuVTf0fG2D-hg 257
jcvi/projects/age.py sha256=iAVl5zcxqFaT0M26BxUUQGw1FMAF9uK5bR-_zMpxIyI 22374
jcvi/projects/allmaps.py sha256=QlUCOwBpTI9TsMtSQRQ0QPVVna8OM-GsU40tbpd0buc 15890
jcvi/projects/bites.py sha256=Nq7_UvH-LXq_1Na_zIJ4Rp_pBwkulklbnxhp0HkJr5o 6738
jcvi/projects/ies.py sha256=uOHdu47cyNSLQac8ZzuvM7Xw5fbA7h__gQ1Xo7oP-n8 14086
jcvi/projects/jcvi.py sha256=DXCzY2CmViqFIO0BYRuxArt2DJoTg8Lly9hYhTAv6rc 9040
jcvi/projects/misc.py sha256=9pfqNLnGsVYpIU1GjyirO5VjY0DBqSqlPTIJnDuaUoo 24149
jcvi/projects/napus.py sha256=PY_oxmi4MthBdqYGFtqhz8mBR90t0spWlGKWkMJ5F24 24960
jcvi/projects/pineapple.py sha256=MpwdBzmfcxMMpyguLmtoXJg6sCfW8x9xCSxvydDHjCo 12686
jcvi/projects/str.py sha256=aPv_iC-7xp_oQhrhgrRFHZFSeP6k06dyI86HFqihYpw 67821
jcvi/projects/sugarcane.py sha256=YKOFsMS95vnneXXOL1vel-1hTi1jxrCsXIJlGZFy7T4 37413
jcvi/projects/synfind.py sha256=NaZcWGyZjSfJLy4UO5sbLkltcgA-67uYj5-RTU7ai_s 23885
jcvi/projects/tgbs.py sha256=vrn_cIp4iEGVdYrco1Z0bgEILRIaqYSIM_UxW56cR1g 21557
jcvi/projects/vanilla.py sha256=f4KHG0EnuMrU5cG7X8T2vW1hskBaTeYcWLuFNOdB_no 11690
jcvi/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/utils/__main__.py sha256=DBHOg7OrgI6KSEpZ7pJwVGvJqoRnCRTaIPMx_bw6QpA 256
jcvi/utils/aws.py sha256=-Cy0TkoK4KceS9_QgNDj2rB10pTYfUXLzn95wuYP7H0 24171
jcvi/utils/cbook.py sha256=QX68F0C_OgajXLEMzM8ucmw6KjgG8UIKVX2ffbAWpSE 13017
jcvi/utils/console.py sha256=zjFLGZcllD7yyo9kRTTdpkMsCGQJq5TRSK9Jl9L3kN8 355
jcvi/utils/db.py sha256=O0sv8HZk0F7Wh-Qo91IZIfymjFdelGDbjNfQyKsWzns 9726
jcvi/utils/ez_setup.py sha256=SB2fIoUMPMJqROZRnt2xOpm-HC1rBgFW7zhLonggr2Q 4238
jcvi/utils/grouper.py sha256=hjitIZa8u2U4mIeTbZY-Nki4hDIvoR1S5ARMzd0-es0 2884
jcvi/utils/orderedcollections.py sha256=FsOEgXKjtTNYN1JRJIqiwtny4-O_c5of0dV9UFKKSDM 10437
jcvi/utils/range.py sha256=HIJvGho1ToWNOr_7b9dfPssbFeQG4abkf4qZiTBLPlM 14596
jcvi/utils/table.py sha256=Iputa10Y4-dtQxZeQCIu-ZQU3XSSsb0ZWH9UNpyEOJM 3946
jcvi/utils/taxonomy.py sha256=upzUYKh7MPBE7PPRD39DJzdup68w2v0_VI2flY2equc 4675
jcvi/utils/validator.py sha256=cNVdfmzFZUPOT7h0viKZ3gjc-ppxniK-GKKhxJ6mLOo 1522
jcvi/utils/webcolors.py sha256=X4rs_p21YTpiIqcnio-ing7Phz1ioEMumo3cI_8eSYc 1412
jcvi/utils/data/Airswing.ttf sha256=tlmIZ0wN4S2EYie9jiE3M_3lz5jX5Yhp735soOiLjSY 16912
jcvi/utils/data/Collegia.ttf sha256=XD1JCPG-TrRJH1G5PVo-fsT3pot6w0P6upC-v2Wafm0 103940
jcvi/utils/data/HookedUp.ttf sha256=ch1sKvDH-7J2EavFgQkAM96ihop-_mh2xVJzAnP9lJE 20468
jcvi/utils/data/Humor-Sans.ttf sha256=Le1qJ0SMntMKr_F3dE4rzx5S4KqwGLKovmRWXfYzMY8 25832
jcvi/utils/data/TREDs.meta.csv sha256=-SUB88CMKnK-TnxbyB22Bj3JsBlsR1FQ7WmF_7Z78hI 28065
jcvi/utils/data/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/utils/data/adapters.fasta sha256=fGEQXFw8oOXpIknTHa3rNIS9broBuy2EKUcrE-pom3M 911
jcvi/utils/data/blosum80.mat sha256=TErStYtAUHbQ2CrcSffc4gteEzJed3dGhbKVodfAu6k 3321
jcvi/utils/data/chrY.hg38.unique_ccn.gc sha256=o6adsOc1BhxX9E5sfjIqzmAh1BE-5qm4A2g9FoGpLLs 7686
jcvi/utils/data/colorchecker.txt sha256=yTf2o74GcazbUTLXrMvgbmx7Bq96c4igIfYDjSUrD98 282
jcvi/utils/data/hg38.band.txt sha256=LjZobULHU6tYWY8iLOoF3vrYI8wWCiHtMiAjU0r3CSQ 45544
jcvi/utils/data/hg38.chrom.sizes sha256=4dkVJBgDhFepWelJ2Zycr3rj5Ph8-7T_59i5pUuhICs 11672
jcvi/utils/data/instance.json sha256=QiKniTkv4aiYA6KHM2V4haRlB2qlFmz-0E2c2zTPLV4 1000
jcvi/variation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
jcvi/variation/__main__.py sha256=hPli4BJk1cDnpuwanrt7DGwdxXe6jdUKxEKYsvM9WgU 256
jcvi/variation/cnv.py sha256=OVS1bHm1Dh_MTXecSS-0Tf36_8mOt12L9JmXKSKOzc8 45266
jcvi/variation/deconvolute.py sha256=9-pvAMLzOkM3nnRIebIrcRG3jwDbWirwdGf_8-qQE6k 7022
jcvi/variation/delly.py sha256=aCLn6CpyR5mGoaF9C_YwuklsxEAyelEAW5hAzXvBMqo 9349
jcvi/variation/impute.py sha256=1ToY3HIJ1TFIB61qw3PQuXx0sLzNFYUAQBAo5c58TK0 11736
jcvi/variation/phase.py sha256=GxBmEyedMTAEgmtmo8z9oHLy9AyVYPU0DASWBSckmjk 3440
jcvi/variation/snp.py sha256=-F8_zd0EzylnNIuqWg1m4ScNsfPqsCY-UdwqziFPXgM 10785
jcvi/variation/str.py sha256=kfC5nchSnr9dEvcwhtghT7Nquug3kj5dDJyGAG9D82Q 48760
jcvi-1.5.1.dist-info/METADATA sha256=Vi4nWLcdzzHWxaVzYrL8Egyzv3AFtbqvnAdfKqmKlSc 10383
jcvi-1.5.1.dist-info/WHEEL sha256=vP-0vxf15EQv6Ew4AsRTNF7Ihd0yFaQBwR33gdFAgbA 104
jcvi-1.5.1.dist-info/entry_points.txt sha256=WHau3Lk2epga9MfLO0wzdH10vGFF-7_BeGw75VPFILs 39
jcvi-1.5.1.dist-info/licenses/LICENSE sha256=WY0bnAV8cHK7UqoyODO9ndWvu5ayYt9-HKRf7zNoWM8 1292
jcvi-1.5.1.dist-info/RECORD

entry_points.txt

jcvi = jcvi.cli:main