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1.0 hiscanner-1.0-py3-none-any.whl

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Project: hiscanner
Version: 1.0
Filename: hiscanner-1.0-py3-none-any.whl
Download: [link]
Size: 4868293
MD5: 52181fc8b1200f0eddc60894fa8d5b4b
SHA256: 2791363946b2ee8f4ddb9d02d03fa376a62f46034c2bb291c93d058befcc86a6
Uploaded: 2025-02-12 16:08:12 +0000

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METADATA

Metadata-Version: 2.1
Name: hiscanner
Version: 1.0
Summary: High-resolution single-cell copy number analysis.
Author: Yifan Zhao
Author-Email: yifnzhao[at]gmail.com
Project-Url: Changelog, https://github.com/parklab/hiscanner/blob/main/CHANGELOG.md
Project-Url: Documentation, https://github.com/parklab/hiscanner#readme
Project-Url: Homepage, https://github.com/parklab/hiscanner
Project-Url: Repository, https://github.com/parklab/hiscanner.git
License: MIT
Keywords: bioinformatics,single-cell,cnv,genomics
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Requires-Python: >=3.8
Requires-Dist: click (>=8.0.0)
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Requires-Dist: hmmlearn (>=0.2.7)
Requires-Dist: joblib (>=1.0.0)
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Requires-Dist: numpy (>=1.20.0)
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Requires-Dist: scikit-learn (>=1.0.0)
Requires-Dist: scipy (>=1.9.3)
Requires-Dist: seaborn (>=0.11.0)
Requires-Dist: tqdm (>=4.62.0)
Description-Content-Type: text/markdown
[Description omitted; length: 8309 characters]

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hiscanner-1.0.dist-info/RECORD

entry_points.txt

hiscanner = hiscanner.cli:main